Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30327
         (471 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73426-1|CAA97792.1|  155|Caenorhabditis elegans Hypothetical pr...   111   2e-25
U28941-5|AAM98026.2|  989|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AY314775-1|AAQ84882.1|  971|Caenorhabditis elegans methuselah-li...    29   2.2  
U22831-4|AAK20066.1|  633|Caenorhabditis elegans Hypothetical pr...    28   2.9  
Z81057-1|CAB02914.2|  460|Caenorhabditis elegans Hypothetical pr...    27   9.0  
Z79604-4|CAB60456.1|  598|Caenorhabditis elegans Hypothetical pr...    27   9.0  

>Z73426-1|CAA97792.1|  155|Caenorhabditis elegans Hypothetical
           protein F40F11.1 protein.
          Length = 155

 Score =  111 bits (268), Expect = 2e-25
 Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 3/86 (3%)
 Frame = +3

Query: 3   AFQKQATVFLNRKGGM---KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSIRG 173
           AF KQ TV LN K  +    +K  R+ + VGLGFK PR+A+EGTYIDKKCP+  NV IRG
Sbjct: 8   AFLKQPTVNLNNKARILAGSKKTPRYIREVGLGFKAPRDAVEGTYIDKKCPWAGNVPIRG 67

Query: 174 RILTGVVQKMKMQRTIVIRRDYLHYL 251
            ILTGVV K KM RTIV+RRDYLHY+
Sbjct: 68  MILTGVVLKNKMTRTIVVRRDYLHYI 93



 Score = 83.4 bits (197), Expect = 7e-17
 Identities = 35/48 (72%), Positives = 41/48 (85%)
 Frame = +2

Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
           +Y R+EKRH+N+  H SP FRD+  GD+VTIGECRPLSKTVRFNVLKV
Sbjct: 95  KYRRYEKRHKNVPAHCSPAFRDIHPGDLVTIGECRPLSKTVRFNVLKV 142


>U28941-5|AAM98026.2|  989|Caenorhabditis elegans Hypothetical
           protein F31D5.4 protein.
          Length = 989

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +2

Query: 206 DAENYRDPPRLPSLPTQYNR--FEKRHRNMSVHLSPCFRDVEI 328
           +AE Y  PPR+P     Y    ++    + +V LSPC R   +
Sbjct: 540 EAETYTPPPRVPRSAGFYEAEPYQMNATSQTVPLSPCARQTSL 582


>AY314775-1|AAQ84882.1|  971|Caenorhabditis elegans methuselah-like
           protein MTH-2 protein.
          Length = 971

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +2

Query: 206 DAENYRDPPRLPSLPTQYNR--FEKRHRNMSVHLSPCFRDVEI 328
           +AE Y  PPR+P     Y    ++    + +V LSPC R   +
Sbjct: 522 EAETYTPPPRVPRSAGFYEAEPYQMNATSQTVPLSPCARQTSL 564


>U22831-4|AAK20066.1|  633|Caenorhabditis elegans Hypothetical
           protein F47D12.5 protein.
          Length = 633

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 391 QNIESNCFGQRSAFADRYNITNLHVPEARRQMHGH 287
           +++E  CF Q   F D +N+T L + +  R M+ H
Sbjct: 129 RSVELECFEQ---FVDLFNLTGLRILDVSRSMYKH 160


>Z81057-1|CAB02914.2|  460|Caenorhabditis elegans Hypothetical
           protein F10D11.2 protein.
          Length = 460

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 215 NYRDPPRLPSLPTQYNRFEKRHRNMSVHLSPCFRDV 322
           N+    R   LP QY++  + H+ M  HLS   R++
Sbjct: 425 NHEPLHRSAFLPPQYHKDRRIHQQMDSHLSDTLRNL 460


>Z79604-4|CAB60456.1|  598|Caenorhabditis elegans Hypothetical
           protein ZK662.5 protein.
          Length = 598

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 289 VRAFVALLQGRGDW*YCNDRRMQ 357
           +RAFV L++   DW Y   RRMQ
Sbjct: 250 LRAFVRLIRNNSDW-YARYRRMQ 271


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,424,555
Number of Sequences: 27780
Number of extensions: 199899
Number of successful extensions: 546
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)