Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30321X
         (560 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   4.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   5.5  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   5.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.5  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   5.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.2  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   7.2  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +1

Query: 427 LLCVIMQLNY*NPHMYLFIYLLEHPQKNRVIIVI 528
           +  ++M   Y    MYLFI++    +    ++VI
Sbjct: 283 ITAMVMWFGYVIDTMYLFIHIRSRQEDTDTLVVI 316


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +1

Query: 427 LLCVIMQLNY*NPHMYLFIYLLEHPQKNRVIIVI 528
           +  ++M   Y    MYLFI++    +    ++VI
Sbjct: 239 ITAMVMWFGYVIDTMYLFIHIRSRQEDTDTLVVI 272


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 387  PPLRQQMLKKFAGYYNFYAIENVKK 313
            PP R++      GYY  Y + N  K
Sbjct: 1018 PPAREEWNGDILGYYVGYRLANSDK 1042


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -3

Query: 393 NLPPLRQQMLKKFAGYYNFYAIENVKKIALSTRIIVQQTNVAE 265
           +L  + QQ+ K ++G Y+ Y +     + L T I+    +V E
Sbjct: 265 DLSHMMQQLGKAYSGMYSMYCL-----LILLTTIVASYGSVTE 302


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 150 LLRQAITYYYYIHL 191
           LL   I Y+YY+HL
Sbjct: 253 LLLVCIYYFYYMHL 266


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -3

Query: 393 NLPPLRQQMLKKFAGYYNFYAIENVKKIALSTRIIVQQTNVAE 265
           +L  + QQ+ K ++G Y+ Y +     + L T I+    +V E
Sbjct: 265 DLSHMMQQLGKAYSGMYSMYCL-----LILLTTIVASYGSVTE 302


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short
          gastrulation protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -2

Query: 46 YCVFCPCIPV 17
          YC+ C C+P+
Sbjct: 61 YCMKCECVPL 70


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 137 CNVRRSTVEPSSKYGI*IRSKQNKFHD 57
           C+V  ST+E ++K G  I     + HD
Sbjct: 577 CDVCYSTIEEANKAGELIHKIDTEDHD 603


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 404 YHAQTYPHYVNKCSRSLPAII 342
           Y   TYPH  N    S+P  I
Sbjct: 349 YFLNTYPHLFNFFEFSVPLAI 369


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 137 CNVRRSTVEPSSKYGI*IRSKQNKFHD 57
           C+V  ST+E ++K G  I     + HD
Sbjct: 302 CDVCYSTIEEANKAGELIHKIDTEDHD 328


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,939
Number of Sequences: 336
Number of extensions: 3293
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)