BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30321X (560 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC063133-1|AAH63133.1| 1045|Homo sapiens TDRD1 protein protein. 29 8.5 BC035010-1|AAH35010.1| 1179|Homo sapiens TDRD1 protein protein. 29 8.5 AK024735-1|BAB14982.1| 713|Homo sapiens protein ( Homo sapiens ... 29 8.5 AF285606-1|AAK31985.1| 777|Homo sapiens tudor domain containing... 29 8.5 >BC063133-1|AAH63133.1| 1045|Homo sapiens TDRD1 protein protein. Length = 1045 Score = 29.5 bits (63), Expect = 8.5 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = -3 Query: 327 ENVKKIALSTRIIVQQTNVAEGRPFGRKKIGYLCCIR 217 EN +K+ + T +++ N + RP R +IG CC + Sbjct: 829 ENQEKLCMLTAELLEYCNAPKSRPPYRPRIGDACCAK 865 >BC035010-1|AAH35010.1| 1179|Homo sapiens TDRD1 protein protein. Length = 1179 Score = 29.5 bits (63), Expect = 8.5 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = -3 Query: 327 ENVKKIALSTRIIVQQTNVAEGRPFGRKKIGYLCCIR 217 EN +K+ + T +++ N + RP R +IG CC + Sbjct: 964 ENQEKLCMLTAELLEYCNAPKSRPPYRPRIGDACCAK 1000 >AK024735-1|BAB14982.1| 713|Homo sapiens protein ( Homo sapiens cDNA: FLJ21082 fis, clone CAS02992. ). Length = 713 Score = 29.5 bits (63), Expect = 8.5 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = -3 Query: 327 ENVKKIALSTRIIVQQTNVAEGRPFGRKKIGYLCCIR 217 EN +K+ + T +++ N + RP R +IG CC + Sbjct: 495 ENQEKLCMLTAELLEYCNAPKSRPPYRPRIGDACCAK 531 >AF285606-1|AAK31985.1| 777|Homo sapiens tudor domain containing protein 1 protein. Length = 777 Score = 29.5 bits (63), Expect = 8.5 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = -3 Query: 327 ENVKKIALSTRIIVQQTNVAEGRPFGRKKIGYLCCIR 217 EN +K+ + T +++ N + RP R +IG CC + Sbjct: 561 ENQEKLCMLTAELLEYCNAPKSRPPYRPRIGDACCAK 597 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 80,631,156 Number of Sequences: 237096 Number of extensions: 1599989 Number of successful extensions: 2675 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2618 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2675 length of database: 76,859,062 effective HSP length: 86 effective length of database: 56,468,806 effective search space used: 5646880600 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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