Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30320
(612 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 111 6e-26
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 64 2e-11
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 51 1e-07
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 41 1e-04
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 40 4e-04
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 38 0.001
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 33 0.025
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 31 0.099
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 30 0.30
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 29 0.53
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 28 1.2
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 27 2.1
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 3.7
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 4.9
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 8.6
SPAC4F8.03 ||SPAC644.01c|SBDS family ribosome maturation protein... 25 8.6
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 111 bits (268), Expect = 6e-26
Identities = 54/85 (63%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 432
G+SAAVSKTA APIERVKLL+Q Q + + RYKGI + F R E+G++S WRGN
Sbjct: 35 GVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGN 94
Query: 433 FANVIRYFPTQALNFAFKDKYKQVF 507
ANV+RYFPTQALNFAFKDK+K++F
Sbjct: 95 TANVLRYFPTQALNFAFKDKFKKMF 119
Score = 30.7 bits (66), Expect = 0.17
Identities = 19/83 (22%), Positives = 36/83 (43%)
Frame = +1
Query: 256 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 435
G + A S V ++ + L S + ++++ G+VD + + + GL +RG
Sbjct: 140 GAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFG 199
Query: 436 ANVIRYFPTQALNFAFKDKYKQV 504
+V+ + L F D K V
Sbjct: 200 PSVVGIVVYRGLYFGMYDTLKPV 222
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 63.7 bits (148), Expect = 2e-11
Identities = 32/82 (39%), Positives = 51/82 (62%)
Frame = +1
Query: 256 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 435
G++A VS+TAV+P+ER+K++ QVQ+ ++ Y + V+I +GL+ F+RGN
Sbjct: 28 GVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFRGNG 80
Query: 436 ANVIRYFPTQALNFAFKDKYKQ 501
N +R FP A+ FA + KQ
Sbjct: 81 TNCLRAFPYGAVQFATFNMLKQ 102
Score = 34.3 bits (75), Expect = 0.014
Identities = 17/74 (22%), Positives = 34/74 (45%)
Frame = +1
Query: 256 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 435
G + + +T P + ++ QV + YK I A I K +G+ F+RG
Sbjct: 234 GFTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSAIFHIYKTEGINGFFRGYS 290
Query: 436 ANVIRYFPTQALNF 477
+N+++ P ++ +
Sbjct: 291 SNMLKIIPVMSITW 304
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 51.2 bits (117), Expect = 1e-07
Identities = 30/91 (32%), Positives = 50/91 (54%)
Frame = +1
Query: 232 VR*GLPGCGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 411
V+ G+ G G + V+K+ VAP++RVK+L Q H S + A R+ G+ A I GL
Sbjct: 18 VKSGIAG-GTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGL 75
Query: 412 LSFWRGNFANVIRYFPTQALNFAFKDKYKQV 504
++G+ A + R FP + F ++ ++V
Sbjct: 76 HGLYQGHTATLYRVFPYAGIKFVAYEQVRRV 106
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 41.1 bits (92), Expect = 1e-04
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +1
Query: 283 AVAPIERVKLL--LQVQHVSKQIAADQR-YKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 453
AVA I V L L V Q++ + Y G D +I K +G +RG ++
Sbjct: 16 AVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILME 75
Query: 454 FPTQALNFAFKDKYKQVFPAVLTRRRSSGVTSLV 555
P +AL FA D Y +++ V R+ SS S++
Sbjct: 76 APKRALKFASNDTYSKLWRKVFKRKDSSPALSIL 109
Score = 32.3 bits (70), Expect = 0.057
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +1
Query: 256 GISAAVSKT-AVAPIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 429
G A ++T V P E +K+ LQ V++ SK Y G VD F +I K++ +L+ + G
Sbjct: 111 GSCAGFTETFVVVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQERILALYNG 163
Query: 430 NFANVIRYFPTQALNFAFKDKYK 498
A + R+ A F K +
Sbjct: 164 FEATMWRHVVWNAGYFGVIQKIR 186
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 39.5 bits (88), Expect = 4e-04
Identities = 20/81 (24%), Positives = 39/81 (48%)
Frame = +1
Query: 259 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 438
+S + T V P+ ++ LQ Q S A Y G +D F + K +G ++G
Sbjct: 344 LSGSTGATIVFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGLSP 400
Query: 439 NVIRYFPTQALNFAFKDKYKQ 501
N+++ P+ A+++ + K+
Sbjct: 401 NLLKVAPSVAISYLVYENCKK 421
Score = 31.5 bits (68), Expect = 0.099
Identities = 19/92 (20%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +1
Query: 256 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR-IPKEQGLLSFWRGN 432
G++ +V++ + P++ +K +Q +S+ Q K I+ + + + K G+ ++RG
Sbjct: 236 GMAGSVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGYYRGV 291
Query: 433 FANVIRYFPTQALNFAFKDKYKQVFPAVLTRR 528
++ FP A + + K+ + +L R
Sbjct: 292 LVGILGMFPYSATDLGTFEGLKRTWIGILASR 323
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 37.9 bits (84), Expect = 0.001
Identities = 23/83 (27%), Positives = 44/83 (53%)
Frame = +1
Query: 256 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 435
G+S A++ + P++ VK LLQ + S I ++ KG +D I G+ SF++G
Sbjct: 212 GLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIPSFFKGIR 270
Query: 436 ANVIRYFPTQALNFAFKDKYKQV 504
++ P A+++A + K++
Sbjct: 271 PRMVVAMPATAVSWAAYEAGKEI 293
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 33.5 bits (73), Expect = 0.025
Identities = 21/78 (26%), Positives = 37/78 (47%)
Frame = +1
Query: 244 LPGCGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 423
L G GI+ ++ P E V+ L+ S I +Y G++ F + EQG++ +
Sbjct: 276 LGGAGIAKFMAAGIAYPHEVVRTRLRQ---SPSINGTPKYTGLIQCFKLVWMEQGIVGLY 332
Query: 424 RGNFANVIRYFPTQALNF 477
G A+++R P + F
Sbjct: 333 GGLTAHLLRVVPNACILF 350
Score = 25.0 bits (52), Expect = 8.6
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 12/86 (13%)
Frame = +1
Query: 256 GISAAVSKTAVAPIERVKLLLQVQHVS----KQIAADQR-----YKGIVDAFV---RIPK 399
G++ + A AP++ VK LQ KQ A + Y+ +D + +
Sbjct: 56 GVAGMLGAIATAPLDVVKTRLQSDFYKDRFLKQTAKSKSPLTAAYRHFMDTCIILKNVKV 115
Query: 400 EQGLLSFWRGNFANVIRYFPTQALNF 477
+G + +RG N+I P +++NF
Sbjct: 116 HEGTRALFRGLGPNLIGTIPARSINF 141
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 31.5 bits (68), Expect = 0.099
Identities = 18/82 (21%), Positives = 36/82 (43%)
Frame = +1
Query: 259 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 438
++ ++ PI+ VK +Q ++A + YK + +I + GLL FW G
Sbjct: 212 VAGIITVYCTQPIDTVKSRMQ------SLSASKEYKNSIHCAYKILTQDGLLRFWSGATP 265
Query: 439 NVIRYFPTQALNFAFKDKYKQV 504
+ R + + F +K ++
Sbjct: 266 RLARLILSGGIVFTVYEKVMEI 287
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 29.9 bits (64), Expect = 0.30
Identities = 19/83 (22%), Positives = 36/83 (43%)
Frame = +1
Query: 256 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 435
GIS+ + + +AP + +K+ +Q+ S + F +++G+ + WRGN
Sbjct: 24 GISSVICRFMIAPFDVIKIRMQITQSSLR-----------PVFKETVQKEGVRALWRGNV 72
Query: 436 ANVIRYFPTQALNFAFKDKYKQV 504
+ Y A F K K +
Sbjct: 73 VAELLYLVYGAAEFVAFSKLKHL 95
Score = 25.4 bits (53), Expect = 6.5
Identities = 17/67 (25%), Positives = 29/67 (43%)
Frame = +1
Query: 259 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 438
I+ A SK + P++ V LQ YK D F+ I + G+ +RG
Sbjct: 201 IAGAGSKAIMFPVDTVVKTLQT--------FPSNYKSFKDCFLSIYRNSGIKGLYRGLSV 252
Query: 439 NVIRYFP 459
++++ P
Sbjct: 253 SMLKVAP 259
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 29.1 bits (62), Expect = 0.53
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Frame = +1
Query: 256 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYK---GIVDAFVRIPKEQGLLSFWR 426
G + S VAP++ VK Q Q + G + + I +G+ +R
Sbjct: 13 GAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYR 72
Query: 427 GNFANVIRYFPTQALNFAFKDKYKQVF 507
G ++ Y P+ ++ F +K K +F
Sbjct: 73 GVGPMMLGYLPSWSIYFVVYEKCKVLF 99
Score = 29.1 bits (62), Expect = 0.53
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Frame = +1
Query: 346 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR------YFPTQALNFAFKDKY---K 498
A Y DAF +I K +GL +F+RG F ++ FP +F D + K
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHVGIQFPLYEYFKSFLDDFFGKK 284
Query: 499 QVFPAVLTRRRSSGVTSLVIWP 564
F VL S S V +P
Sbjct: 285 SNFHIVLAATLSKIAASTVTYP 306
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 27.9 bits (59), Expect = 1.2
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 253 CGISAAVSKTAV-APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 429
CG++A V + V P+E +K Q+ +++ + + +GL F+RG
Sbjct: 89 CGMTAEVVSSFVWTPLEVIKARTQISQKGS----------VINTISTLARSEGLKGFYRG 138
Query: 430 NFANVIRYFPT 462
+ V Y PT
Sbjct: 139 YWMGVAIYLPT 149
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 27.1 bits (57), Expect = 2.1
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +1
Query: 259 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 429
IS + V P+E V++ LQ+Q K + Y G D +I + GL +G
Sbjct: 121 ISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQYGLSGIMKG 172
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 82 YEITPNLLFKNQELVFRDPPSACAATPTSTY 174
YE+ N F N PP AC+ TS Y
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 4.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 386 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMGATAV 279
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 8.6
Identities = 20/98 (20%), Positives = 40/98 (40%)
Frame = +1
Query: 241 GLPGCGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 420
GL CG + +A+ P++ +K QV Y G + F I ++GL
Sbjct: 30 GLLACG----TTHSAITPLDLIKCRKQVN--------PNIYPGNIAGFKTILSKEGLRGL 77
Query: 421 WRGNFANVIRYFPTQALNFAFKDKYKQVFPAVLTRRRS 534
+ G +I Y + F + +K + ++ +++
Sbjct: 78 YTGGMPTLIGYSLQGCGKYGFYELFKHKYSTLVGAQKA 115
>SPAC4F8.03 ||SPAC644.01c|SBDS family ribosome maturation
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 246
Score = 25.0 bits (52), Expect = 8.6
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +1
Query: 163 TSTYSPSEDHIIEQNVEPRR-----SGRVR*GLPGCGISAAVSKTAVA-PIERVKLLLQV 324
+STY H+ ++P + + L CG S + SKTA + +E +K LQ
Sbjct: 105 SSTYRDIVSHVTAMCMDPNSKRPYPASIIEKALSDCGFSVSTSKTAKSQALEAIK-KLQE 163
Query: 325 QHVSKQIAADQRYKGIVD 378
++ + A R + +VD
Sbjct: 164 KNEIPIVRARMRIRIVVD 181
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,311,441
Number of Sequences: 5004
Number of extensions: 44445
Number of successful extensions: 136
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 133
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 267622334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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