BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30320 (612 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 7e-23 SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 4e-15 SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10 SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 56 3e-08 SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 50 2e-06 SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 44 7e-05 SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 44 1e-04 SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 40 0.002 SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 39 0.003 SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.003 SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004 SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 39 0.004 SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 38 0.005 SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.015 SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.020 SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.020 SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 36 0.026 SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034 SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 35 0.045 SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.060 SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10 SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.14 SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 33 0.14 SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 33 0.14 SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 33 0.24 SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.24 SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.32 SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.74 SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 31 0.97 SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97 SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3 SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3 SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3 SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 30 1.3 SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 30 1.7 SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 30 1.7 SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 29 3.0 SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 29 3.0 SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 3.0 SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 6.9 SB_27857| Best HMM Match : Cadherin (HMM E-Value=0) 27 9.1 SB_13696| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1 SB_11202| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1 SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044) 27 9.1 >SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 304 Score = 104 bits (249), Expect = 7e-23 Identities = 51/85 (60%), Positives = 61/85 (71%), Gaps = 1/85 (1%) Frame = +1 Query: 256 GISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 432 G +A +SKTA APIERVKLL+Q Q + K D YKG++D R + +G LSFWRGN Sbjct: 17 GAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGN 76 Query: 433 FANVIRYFPTQALNFAFKDKYKQVF 507 AN IRYFPTQALNFAFKD+ K +F Sbjct: 77 LANCIRYFPTQALNFAFKDQVKALF 101 Score = 36.3 bits (80), Expect = 0.020 Identities = 16/50 (32%), Positives = 31/50 (62%) Frame = +1 Query: 358 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 507 +YKG +D ++I K++G +S +G AN++R + F DK+K+++ Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELY 296 >SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 262 Score = 78.6 bits (185), Expect = 4e-15 Identities = 36/82 (43%), Positives = 59/82 (71%) Frame = +1 Query: 256 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 435 GI+ AVS+T+V+P+ERVK+LLQ+Q + ++KG++ ++I KE+G+L +++GN Sbjct: 42 GIAGAVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILGYFKGNG 95 Query: 436 ANVIRYFPTQALNFAFKDKYKQ 501 NVIR FP A+ FA ++YK+ Sbjct: 96 TNVIRIFPYSAVQFAAYEEYKK 117 >SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 453 Score = 63.7 bits (148), Expect = 1e-10 Identities = 36/85 (42%), Positives = 50/85 (58%) Frame = +1 Query: 250 GCGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 429 G G A VS+TA AP++R+K+LLQVQ A+ GIV F + +E G+ S WRG Sbjct: 142 GGGALAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRG 195 Query: 430 NFANVIRYFPTQALNFAFKDKYKQV 504 N ANVI+ P + F +K K++ Sbjct: 196 NGANVIKIAPESGIKFFAYEKAKKL 220 Score = 35.5 bits (78), Expect = 0.034 Identities = 19/83 (22%), Positives = 44/83 (53%) Frame = +1 Query: 259 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 438 ++ S+T++ P+E +K L ++ + Y+G++ A I +++G+ SF+RG F Sbjct: 239 MAGVASQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFYRGLFP 291 Query: 439 NVIRYFPTQALNFAFKDKYKQVF 507 +++ P ++ A + K + Sbjct: 292 SLLGIIPYAGIDLAVYETLKNFY 314 >SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) Length = 76 Score = 55.6 bits (128), Expect = 3e-08 Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 1/58 (1%) Frame = +1 Query: 256 GISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 426 G +A +SKTA APIERVKLL+Q Q + K YKG+VD +R + +G+ SFWR Sbjct: 18 GAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMRTYRAEGIGSFWR 75 >SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 375 Score = 49.6 bits (113), Expect = 2e-06 Identities = 24/75 (32%), Positives = 42/75 (56%) Frame = +1 Query: 256 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 435 G SA ++++ +P+E VK+L QV + G++ F + K +G+ +FW+GN Sbjct: 66 GTSAVLARSLTSPLEVVKVLAQV-------GTQEAKPGLIRTFASVYKREGIKAFWKGNG 118 Query: 436 ANVIRYFPTQALNFA 480 + IR FP A+ +A Sbjct: 119 VSCIRLFPYSAVQYA 133 Score = 41.1 bits (92), Expect = 7e-04 Identities = 23/66 (34%), Positives = 36/66 (54%) Frame = +1 Query: 262 SAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 441 S ++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G + Sbjct: 162 STLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKGVTPS 218 Query: 442 VIRYFP 459 + FP Sbjct: 219 FLGLFP 224 >SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 274 Score = 44.4 bits (100), Expect = 7e-05 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 6/103 (5%) Frame = +1 Query: 286 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 465 +AP++ VK+ LQ+Q +K+ + Y+G VD V++ + +GL ++GN +R P Sbjct: 51 IAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGF 109 Query: 466 ALNFA----FKDKYKQVFPA--VLTRRRSSGVTSLVIWPPVVP 576 A+ F D + +F + V T + G +V W P Sbjct: 110 AVYFGVYELLCDWFSNLFGSRGVATYLMAGGFAGVVSWASTFP 152 Score = 34.3 bits (75), Expect = 0.079 Identities = 22/74 (29%), Positives = 38/74 (51%) Frame = +1 Query: 256 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 435 G + VS + P + +K +Q + RYKG++D ++ KE+G++ F RG + Sbjct: 140 GFAGVVSWASTFPFDVIKSRIQADGNLGKF----RYKGMMDCALQSYKEEGMIVFTRGIW 195 Query: 436 ANVIRYFPTQALNF 477 ++R F Q L F Sbjct: 196 PTLLRGF-LQVLRF 208 >SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) Length = 1026 Score = 43.6 bits (98), Expect = 1e-04 Identities = 23/83 (27%), Positives = 41/83 (49%) Frame = +1 Query: 259 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 438 I A TAV PI+ VK +Q Q + A++ YK +D F ++ + +G + +RG Sbjct: 922 IKKATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLP 979 Query: 439 NVIRYFPTQALNFAFKDKYKQVF 507 ++ P +A+ D + +F Sbjct: 980 QLLGVSPEKAIKLTTNDFVRGIF 1002 >SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) Length = 773 Score = 39.9 bits (89), Expect = 0.002 Identities = 14/48 (29%), Positives = 30/48 (62%) Frame = +1 Query: 358 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 501 +Y G+ +I +++GL +++GN N++R P A+ FA +++K+ Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637 >SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) Length = 95 Score = 39.1 bits (87), Expect = 0.003 Identities = 16/55 (29%), Positives = 32/55 (58%) Frame = +1 Query: 343 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 507 I ++Y G+++AF RI +++G+ +F+RG +I P ++F + K+ F Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAF 73 >SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 276 Score = 39.1 bits (87), Expect = 0.003 Identities = 22/93 (23%), Positives = 47/93 (50%), Gaps = 9/93 (9%) Frame = +1 Query: 256 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAA---------DQRYKGIVDAFVRIPKEQG 408 GI+A++++ A PI+ K+ LQ+Q S +A+ D Y+G++ V + K +G Sbjct: 22 GIAASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGMLGTMVTLFKTEG 81 Query: 409 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 507 + + ++G + R ++ D+ K ++ Sbjct: 82 MKTMYKGLIPGIHRQLCFASIRIGLYDQVKAMY 114 >SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 179 Score = 38.7 bits (86), Expect = 0.004 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 4/63 (6%) Frame = +1 Query: 253 CG-ISAAVSKTAVAPIERVKLLLQVQ---HVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 420 CG +S +SK + P + +K +QVQ + Q+Y G+ D F I KE+G + Sbjct: 35 CGALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGL 94 Query: 421 WRG 429 ++G Sbjct: 95 FKG 97 >SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) Length = 577 Score = 38.7 bits (86), Expect = 0.004 Identities = 21/56 (37%), Positives = 32/56 (57%) Frame = +1 Query: 262 SAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 429 S ++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G Sbjct: 431 STLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKG 483 >SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) Length = 192 Score = 38.3 bits (85), Expect = 0.005 Identities = 21/78 (26%), Positives = 34/78 (43%) Frame = +1 Query: 259 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 438 IS + A P++ K +Q + I YKG +D RI + +G+ + W+G Sbjct: 102 ISGLATTVASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALWKGFTP 158 Query: 439 NVIRYFPTQALNFAFKDK 492 R P L F F ++ Sbjct: 159 YYFRIGPHTVLTFIFLEQ 176 Score = 35.1 bits (77), Expect = 0.045 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = +1 Query: 361 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 504 Y + +A R+ KE+G+L+ WRG +R A A + KQ+ Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQL 82 >SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 611 Score = 36.7 bits (81), Expect = 0.015 Identities = 20/71 (28%), Positives = 32/71 (45%) Frame = +1 Query: 256 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 435 GI+ +S P++ VK Q + +Y G D +I G+ +F +G Sbjct: 365 GIAGTLSWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQGLL 424 Query: 436 ANVIRYFPTQA 468 A ++R FPT A Sbjct: 425 ATILRGFPTNA 435 >SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 306 Score = 36.3 bits (80), Expect = 0.020 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Frame = +1 Query: 256 GISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 429 G+S+ V +A+A P + VK+ Q + + I YK + AF +I K++G L W G Sbjct: 121 GVSSGVIGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLWTG 175 Score = 31.5 bits (68), Expect = 0.56 Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 2/102 (1%) Frame = +1 Query: 151 AATPTSTYSPSEDHI--IEQNVEPRRSGRVR*GLPGCGISAAVSKTAVAPIERVKLLLQV 324 AA + T P+ DH + N E R G V L ++ V+ +P++ V+ Sbjct: 183 AACISGTQIPTYDHTKHLLLNAELMREG-VALHLASALVAGFVATCVASPVDIVRTRFMT 241 Query: 325 QHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 450 Q + Y+G +D + + +G+L+ ++G F N R Sbjct: 242 QPKDTK-GRPLVYQGTLDCIYKTVRHEGILALYKGFFPNWTR 282 >SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 264 Score = 36.3 bits (80), Expect = 0.020 Identities = 16/45 (35%), Positives = 29/45 (64%) Frame = +1 Query: 370 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 504 ++ AF I + +GLL++++GN A ++R FP A+ F + Y +V Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57 >SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) Length = 247 Score = 35.9 bits (79), Expect = 0.026 Identities = 19/47 (40%), Positives = 28/47 (59%) Frame = +1 Query: 289 APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 429 AP ERVK LLQVQ K+ RY+G+ D +++ + GL ++G Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222 >SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 266 Score = 35.5 bits (78), Expect = 0.034 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +1 Query: 373 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 498 +DA ++IP+ +GL S WRG ++ P + F D+ K Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK 105 >SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) Length = 868 Score = 35.1 bits (77), Expect = 0.045 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 1/85 (1%) Frame = +1 Query: 253 CGISAAVSKTAV-APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 429 CG + + PI+ K +QVQ + Q A +Y+ + A I + G+ ++G Sbjct: 207 CGAGTGLVVAFIEGPIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQG 266 Query: 430 NFANVIRYFPTQALNFAFKDKYKQV 504 A ++R P F F + K + Sbjct: 267 LSATLVRNIPANGFFFGFYEFTKNL 291 >SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 796 Score = 34.7 bits (76), Expect = 0.060 Identities = 16/46 (34%), Positives = 27/46 (58%) Frame = +1 Query: 391 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFPAVLTRR 528 +P+E L W G F++VI F A+N AF+++YK++ + R Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKILRIICAGR 317 >SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 213 Score = 33.9 bits (74), Expect = 0.10 Identities = 19/50 (38%), Positives = 29/50 (58%) Frame = +1 Query: 391 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFPAVLTRRRSSG 540 +P+E +L W G ++VI F A+N F+D+YK+ +L R R SG Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKK----LLRRMRRSG 184 >SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 309 Score = 33.5 bits (73), Expect = 0.14 Identities = 18/73 (24%), Positives = 37/73 (50%) Frame = +1 Query: 259 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 438 +S + A P++ +K+ LQ + K +KG +D F++ + +GL ++G + Sbjct: 29 VSGMLGCAAGQPLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLRGLYKGMLS 87 Query: 439 NVIRYFPTQALNF 477 ++ P+ AL F Sbjct: 88 PLLMATPSTALTF 100 >SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) Length = 302 Score = 33.5 bits (73), Expect = 0.14 Identities = 19/70 (27%), Positives = 36/70 (51%) Frame = +1 Query: 250 GCGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 429 GC ++ + AV P++ +K LQ+ + + + Y GI+D +I +GL +F++G Sbjct: 212 GC-LAGMTASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKG 267 Query: 430 NFANVIRYFP 459 +I P Sbjct: 268 AVPRMIVIAP 277 >SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) Length = 114 Score = 33.5 bits (73), Expect = 0.14 Identities = 18/60 (30%), Positives = 31/60 (51%) Frame = +1 Query: 247 PGCGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 426 P G+S +KT AP+ER+K+L Q Q+ + + A I K++GL +++ Sbjct: 60 PPLGLSTCCAKTTTAPLERLKILFQAQN------KHYKNMSVFGALKAIYKKEGLQGYYK 113 >SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) Length = 343 Score = 32.7 bits (71), Expect = 0.24 Identities = 18/51 (35%), Positives = 29/51 (56%) Frame = +1 Query: 391 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFPAVLTRRRSSGV 543 +P+E L + G ++VI F A+N F+++YK+VF R R+S V Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVFRIATFRGRNSAV 313 >SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 434 Score = 32.7 bits (71), Expect = 0.24 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Frame = +1 Query: 256 GISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 432 G +A V TA P++ V+ L VQ +S + ++ Y GIV A RI E+G+ ++G Sbjct: 35 GATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGIRGLYKGL 92 Query: 433 FANVIRYFP 459 +++ P Sbjct: 93 VPSLVSIAP 101 >SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 328 Score = 32.3 bits (70), Expect = 0.32 Identities = 18/67 (26%), Positives = 32/67 (47%) Frame = +1 Query: 259 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 438 I+ + + P++RVK +LQ++ + Y G VD RI +E G+ ++G Sbjct: 146 IAGVATSFVLTPLDRVKCILQIE----KAFGGSSYGGPVDCLRRIYREAGVRGVYKGISV 201 Query: 439 NVIRYFP 459 +R P Sbjct: 202 TAMRDIP 208 Score = 29.5 bits (63), Expect = 2.2 Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Frame = +1 Query: 256 GISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 432 G +A + V P++ +K+ LQ + K YK D F +I + +G+ +RG Sbjct: 45 GSAAGAAANLVGFPLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYYLFRGV 103 Query: 433 FANVIRYFPTQALNFA 480 ++ P + F+ Sbjct: 104 TVPILNSIPNTTVLFS 119 >SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 1024 Score = 31.1 bits (67), Expect = 0.74 Identities = 22/102 (21%), Positives = 43/102 (42%) Frame = +1 Query: 172 YSPSEDHIIEQNVEPRRSGRVR*GLPGCGISAAVSKTAVAPIERVKLLLQVQHVSKQIAA 351 Y + +++ + + RR V + GIS ++ + P E + L+ Q + Sbjct: 911 YERLKAELLKLHYKSRRDFHVVECMLAAGISKCIATSLCYPHEVARTRLRQQE--SEFLG 968 Query: 352 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 477 Q+Y+ + +E+G + G +VIR P A+ F Sbjct: 969 RQKYRSFFQTLGTVLREEGWRGLYGGLGTHVIRQVPNTAIMF 1010 >SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) Length = 553 Score = 30.7 bits (66), Expect = 0.97 Identities = 18/53 (33%), Positives = 29/53 (54%) Frame = +1 Query: 274 SKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 432 S+ VA ER +L+ Q Q +D RY+G +D+F + +G L +RG+ Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330 >SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 214 Score = 30.7 bits (66), Expect = 0.97 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = +1 Query: 286 VAPIERVKLLLQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 459 + P E +K LQ QH + I+ K G++D ++I + G +RG A R P Sbjct: 124 LCPAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFRGMTATWAREVP 182 >SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 226 Score = 30.3 bits (65), Expect = 1.3 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = +3 Query: 312 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 413 A+ S RQQ R RP +GY +R R YP+ SP Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117 >SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 706 Score = 30.3 bits (65), Expect = 1.3 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = +3 Query: 312 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 413 A+ S RQQ R RP +GY +R R YP+ SP Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217 >SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 300 Score = 30.3 bits (65), Expect = 1.3 Identities = 21/75 (28%), Positives = 34/75 (45%) Frame = +1 Query: 256 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 435 GI+ + P E VK LQ+ + AA Y+G +D + K G+L +RG Sbjct: 48 GIAGGLEICCTFPTEYVKTQLQLD----EKAAKPIYRGPIDCVKKTVKGHGVLGLYRGLS 103 Query: 436 ANVIRYFPTQALNFA 480 + + P ++ FA Sbjct: 104 SLLYGSVPKASVRFA 118 >SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) Length = 404 Score = 30.3 bits (65), Expect = 1.3 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = +3 Query: 312 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 413 A+ S RQQ R RP +GY +R R YP+ SP Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295 >SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) Length = 550 Score = 29.9 bits (64), Expect = 1.7 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Frame = +3 Query: 312 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 413 A+ S RQQ R RP GY +R R YP+ SP Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118 >SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) Length = 54 Score = 29.9 bits (64), Expect = 1.7 Identities = 12/46 (26%), Positives = 23/46 (50%) Frame = +1 Query: 367 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 504 G+V + G +RGN A ++R P ++ F ++YK++ Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46 >SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 203 Score = 29.1 bits (62), Expect = 3.0 Identities = 18/65 (27%), Positives = 31/65 (47%) Frame = +1 Query: 283 AVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 462 A+ PIE +K LQ+ Y+G++ + KE+G+ +F+R + P Sbjct: 14 AMNPIEVIKQRLQMY--------GSPYRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPF 65 Query: 463 QALNF 477 Q L+F Sbjct: 66 QTLHF 70 >SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) Length = 368 Score = 29.1 bits (62), Expect = 3.0 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +1 Query: 391 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFPAVLTRRRSSG 540 +P+E +L + G ++VI F A+N FK++YK++ T R G Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKILRPRCTGRIVEG 316 >SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) Length = 406 Score = 29.1 bits (62), Expect = 3.0 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = +3 Query: 312 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 413 A+ S RQQ R RP +GY +R R YP+ +P Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217 >SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) Length = 792 Score = 27.9 bits (59), Expect = 6.9 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%) Frame = +1 Query: 40 ISKKAHTYPLCSRDYEITPNLLFKNQELV----FRDPPSACAATPTSTYSPS 183 ++ ++ Y C + E +P + + ++D SAC A P TY PS Sbjct: 106 LTDESELYGYCQSNGEWSPAMYTSRHRCMCHAGYQDTVSACTACPRGTYKPS 157 >SB_27857| Best HMM Match : Cadherin (HMM E-Value=0) Length = 2418 Score = 27.5 bits (58), Expect = 9.1 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%) Frame = +1 Query: 88 ITPN----LLFKNQELVFRDPPSACAATPTSTYSPSEDHII 198 +TPN LL + + R+P SA S YSPSE I+ Sbjct: 963 LTPNVRYQLLIRASDSATRNPSSAQVPVYVSVYSPSESPIV 1003 >SB_13696| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 676 Score = 27.5 bits (58), Expect = 9.1 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 5/82 (6%) Frame = +1 Query: 118 ELVFRDPPSA----CAATPTSTYSPSEDHIIEQNVEPRRSGRVR*GLPGCGISAAVSKTA 285 E + RDP + A+P S I EQNVE S + G+ G + T Sbjct: 269 EALTRDPKESDTNVSRASPDSHLQTVISEIREQNVELVESSPIEAGVDGETPAPDEKSTD 328 Query: 286 VAPIERVKLLLQVQHVSK-QIA 348 VAPI V LQ + ++ QIA Sbjct: 329 VAPISEVADALQEKEENEPQIA 350 >SB_11202| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1822 Score = 27.5 bits (58), Expect = 9.1 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +1 Query: 466 ALNFAFKDKYKQVFPAVLTRRRSSGVTSLVIWPPVVPPEQL 588 A+ + K + + PA+ RRS+G SLV PP + P+++ Sbjct: 234 AIAQSIKARDSETSPALEIPRRSAGSVSLVQQPPQMSPKRV 274 >SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044) Length = 1170 Score = 27.5 bits (58), Expect = 9.1 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%) Frame = +1 Query: 67 LCSRDYEITPNLLFKN---QELVFRDPPSACAATPTSTYSPSED 189 LC +D E++P LLF N +++ R P A P++ S ED Sbjct: 54 LCGKDQEVSPKLLFGNDLAKQVRDRKKPPVW-ANPSAPQSAKED 96 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,387,737 Number of Sequences: 59808 Number of extensions: 376404 Number of successful extensions: 1135 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 1024 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1125 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1499981500 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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