Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30317
(745 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein. 23 2.6
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 23 2.6
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 22 4.5
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 22 6.0
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 6.0
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 7.9
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 21 7.9
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 7.9
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 7.9
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 7.9
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 21 7.9
>AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein.
Length = 247
Score = 23.0 bits (47), Expect = 2.6
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +2
Query: 308 VGNVMPVGAMPEGTIVCNLEETMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 487
VG + EG L E +GD G+L AS +FA +++ R+ +G K
Sbjct: 91 VGTALTFCLQEEGGTTSQLIELLGDAGKLL-ASVHFA-------ESQSRRILASAGINKT 142
Query: 488 LPSSNRGWSV 517
S+ G V
Sbjct: 143 FKSTLTGTPV 152
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 23.0 bits (47), Expect = 2.6
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +2
Query: 542 TNLF*KLEGHTTSTRSNVTAGHMYVVLPMNPVEHP--HGG 655
T+L K+EG T +V + H Y P N + HGG
Sbjct: 139 TSLLGKVEGAATHHLGSVYSRHPYESWPFNTMSGATHHGG 178
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 22.2 bits (45), Expect = 4.5
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -2
Query: 540 NTSTSSNNTDQPLLLDGRTFLAPDGSFTLVR 448
N N D PL T PDG FT++R
Sbjct: 564 NGQIKRNLVDAPLK---DTVTVPDGGFTIIR 591
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 370 FFKIAHNGTLRHSSNRHHISNFKS 299
+FK A NGT ++N S F++
Sbjct: 373 YFKRARNGTFSTTANSCRSSTFRN 396
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -2
Query: 540 NTSTSSNNTDQP 505
NTSTSS N+++P
Sbjct: 430 NTSTSSTNSNKP 441
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.4 bits (43), Expect = 7.9
Identities = 5/11 (45%), Positives = 7/11 (63%)
Frame = +1
Query: 406 WKLRHCDWTQS 438
W HCDW ++
Sbjct: 2271 WNKDHCDWPEN 2281
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 21.4 bits (43), Expect = 7.9
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 183 CTFGCCTLPRSIQVQDKEGALHCSEGSTQANLFI 284
C+ GC +L R + DK + STQA ++
Sbjct: 226 CSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYV 259
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.4 bits (43), Expect = 7.9
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 183 CTFGCCTLPRSIQVQDKEGALHCSEGSTQANLFI 284
C+ GC +L R + DK + STQA ++
Sbjct: 540 CSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYV 573
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 7.9
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 183 CTFGCCTLPRSIQVQDKEGALHCSEGSTQANLFI 284
C+ GC +L R + DK + STQA ++
Sbjct: 773 CSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYV 806
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.4 bits (43), Expect = 7.9
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 183 CTFGCCTLPRSIQVQDKEGALHCSEGSTQANLFI 284
C+ GC +L R + DK + STQA ++
Sbjct: 773 CSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYV 806
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 21.4 bits (43), Expect = 7.9
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = -3
Query: 521 TIPTSLCCLMAEPSWLQTVALLLYA*HQDCVQSQWRSFQRHVPDDLYHPLFLQDCTQWYP 342
T+P +C ++ + + LL+YA C Q+ H + Y + L++ Q Y
Sbjct: 285 TVPMIVCPIVWLMDEVVEIYLLVYACASTCEQANDTPSILHELRNNYFHMDLENNVQSYS 344
Query: 341 QA*LQQASHFQL 306
L Q F +
Sbjct: 345 LQLLHQKVQFSV 356
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,387
Number of Sequences: 336
Number of extensions: 4419
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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