Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30317
(745 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 195 2e-49
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 195 2e-49
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 195 2e-49
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 194 2e-49
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 194 2e-49
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 194 2e-49
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 194 2e-49
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 194 2e-49
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 194 2e-49
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 131 2e-30
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 32 1.9
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 32 1.9
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 32 1.9
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 32 1.9
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 195 bits (475), Expect = 2e-49
Identities = 97/161 (60%), Positives = 114/161 (70%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEETMGDRGRLARASGNFATVIGHNPD 442
+TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEE GDRG+LARASGN+ATVI HNP+
Sbjct: 83 HTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPE 142
Query: 443 AKRTRVKLPSGAKKVLPSSNRGWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGHMYVVL 622
K+TRVKLPSG+KKV+ S+NR ++ + K ++ +
Sbjct: 143 TKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Query: 623 PMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRT 745
MNPVEHP GGGNHQHIGK ST++R AGRKVGLIAARRT
Sbjct: 203 AMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAARRT 243
Score = 139 bits (337), Expect = 8e-33
Identities = 63/83 (75%), Positives = 72/83 (86%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 198
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 199 VHFRDPYKFKTRKELFIAPKALH 267
V FRDPY+FK R ELFIA + +H
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIH 83
Score = 84.6 bits (200), Expect = 3e-16
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = +1
Query: 508 LVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAHEP 633
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVA P
Sbjct: 165 VVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNP 206
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 195 bits (475), Expect = 2e-49
Identities = 97/161 (60%), Positives = 114/161 (70%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEETMGDRGRLARASGNFATVIGHNPD 442
+TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEE GDRG+LARASGN+ATVI HNP+
Sbjct: 83 HTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPE 142
Query: 443 AKRTRVKLPSGAKKVLPSSNRGWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGHMYVVL 622
K+TRVKLPSG+KKV+ S+NR ++ + K ++ +
Sbjct: 143 TKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Query: 623 PMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRT 745
MNPVEHP GGGNHQHIGK ST++R AGRKVGLIAARRT
Sbjct: 203 AMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAARRT 243
Score = 139 bits (337), Expect = 8e-33
Identities = 63/83 (75%), Positives = 72/83 (86%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 198
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 199 VHFRDPYKFKTRKELFIAPKALH 267
V FRDPY+FK R ELFIA + +H
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIH 83
Score = 84.6 bits (200), Expect = 3e-16
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = +1
Query: 508 LVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAHEP 633
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVA P
Sbjct: 165 VVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNP 206
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 195 bits (475), Expect = 2e-49
Identities = 97/161 (60%), Positives = 114/161 (70%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEETMGDRGRLARASGNFATVIGHNPD 442
+TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEE GDRG+LARASGN+ATVI HNP+
Sbjct: 83 HTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPE 142
Query: 443 AKRTRVKLPSGAKKVLPSSNRGWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGHMYVVL 622
K+TRVKLPSG+KKV+ S+NR ++ + K ++ +
Sbjct: 143 TKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Query: 623 PMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRT 745
MNPVEHP GGGNHQHIGK ST++R AGRKVGLIAARRT
Sbjct: 203 AMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAARRT 243
Score = 139 bits (337), Expect = 8e-33
Identities = 63/83 (75%), Positives = 72/83 (86%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 198
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 199 VHFRDPYKFKTRKELFIAPKALH 267
V FRDPY+FK R ELFIA + +H
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIH 83
Score = 84.6 bits (200), Expect = 3e-16
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = +1
Query: 508 LVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAHEP 633
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVA P
Sbjct: 165 VVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNP 206
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 194 bits (474), Expect = 2e-49
Identities = 96/161 (59%), Positives = 114/161 (70%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEETMGDRGRLARASGNFATVIGHNPD 442
+TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEE GDRG+LARASGN+ATVI HNP+
Sbjct: 83 HTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPE 142
Query: 443 AKRTRVKLPSGAKKVLPSSNRGWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGHMYVVL 622
K+TRVKLPSG+KKV+ S+NR ++ + K ++ +
Sbjct: 143 TKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Query: 623 PMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRT 745
MNPVEHP GGGNHQHIGK ST++R AGRKVGLIAARRT
Sbjct: 203 AMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAARRT 243
Score = 139 bits (337), Expect = 8e-33
Identities = 63/83 (75%), Positives = 72/83 (86%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 198
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 199 VHFRDPYKFKTRKELFIAPKALH 267
V FRDPY+FK R ELFIA + +H
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIH 83
Score = 84.6 bits (200), Expect = 3e-16
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = +1
Query: 508 LVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAHEP 633
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVA P
Sbjct: 165 VVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNP 206
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 194 bits (474), Expect = 2e-49
Identities = 96/161 (59%), Positives = 114/161 (70%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEETMGDRGRLARASGNFATVIGHNPD 442
+TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEE GDRG+LARASGN+ATVI HNP+
Sbjct: 83 HTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPE 142
Query: 443 AKRTRVKLPSGAKKVLPSSNRGWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGHMYVVL 622
K+TRVKLPSG+KKV+ S+NR ++ + K ++ +
Sbjct: 143 TKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Query: 623 PMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRT 745
MNPVEHP GGGNHQHIGK ST++R AGRKVGLIAARRT
Sbjct: 203 AMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAARRT 243
Score = 139 bits (337), Expect = 8e-33
Identities = 63/83 (75%), Positives = 72/83 (86%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 198
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 199 VHFRDPYKFKTRKELFIAPKALH 267
V FRDPY+FK R ELFIA + +H
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIH 83
Score = 84.6 bits (200), Expect = 3e-16
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = +1
Query: 508 LVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAHEP 633
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVA P
Sbjct: 165 VVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNP 206
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 194 bits (474), Expect = 2e-49
Identities = 96/161 (59%), Positives = 114/161 (70%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEETMGDRGRLARASGNFATVIGHNPD 442
+TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEE GDRG+LARASGN+ATVI HNP+
Sbjct: 83 HTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPE 142
Query: 443 AKRTRVKLPSGAKKVLPSSNRGWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGHMYVVL 622
K+TRVKLPSG+KKV+ S+NR ++ + K ++ +
Sbjct: 143 TKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Query: 623 PMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRT 745
MNPVEHP GGGNHQHIGK ST++R AGRKVGLIAARRT
Sbjct: 203 AMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAARRT 243
Score = 139 bits (337), Expect = 8e-33
Identities = 63/83 (75%), Positives = 72/83 (86%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 198
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 199 VHFRDPYKFKTRKELFIAPKALH 267
V FRDPY+FK R ELFIA + +H
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIH 83
Score = 84.6 bits (200), Expect = 3e-16
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = +1
Query: 508 LVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAHEP 633
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVA P
Sbjct: 165 VVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNP 206
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 194 bits (474), Expect = 2e-49
Identities = 96/161 (59%), Positives = 114/161 (70%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEETMGDRGRLARASGNFATVIGHNPD 442
+TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEE GDRG+LARASGN+ATVI HNP+
Sbjct: 83 HTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPE 142
Query: 443 AKRTRVKLPSGAKKVLPSSNRGWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGHMYVVL 622
K+TRVKLPSG+KKV+ S+NR ++ + K ++ +
Sbjct: 143 TKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Query: 623 PMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRT 745
MNPVEHP GGGNHQHIGK ST++R AGRKVGLIAARRT
Sbjct: 203 AMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAARRT 243
Score = 139 bits (337), Expect = 8e-33
Identities = 63/83 (75%), Positives = 72/83 (86%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 198
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 199 VHFRDPYKFKTRKELFIAPKALH 267
V FRDPY+FK R ELFIA + +H
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIH 83
Score = 84.6 bits (200), Expect = 3e-16
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = +1
Query: 508 LVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAHEP 633
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVA P
Sbjct: 165 VVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNP 206
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 194 bits (474), Expect = 2e-49
Identities = 96/161 (59%), Positives = 114/161 (70%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEETMGDRGRLARASGNFATVIGHNPD 442
+TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEE GDRG+LARASGN+ATVI HNP+
Sbjct: 37 HTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPE 96
Query: 443 AKRTRVKLPSGAKKVLPSSNRGWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGHMYVVL 622
K+TRVKLPSG+KKV+ S+NR ++ + K ++ +
Sbjct: 97 TKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 156
Query: 623 PMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRT 745
MNPVEHP GGGNHQHIGK ST++R AGRKVGLIAARRT
Sbjct: 157 AMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAARRT 197
Score = 84.6 bits (200), Expect = 3e-16
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = +1
Query: 508 LVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAHEP 633
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVA P
Sbjct: 119 VVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNP 160
Score = 64.5 bits (150), Expect = 4e-10
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +1
Query: 157 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPKALH 267
DIIHDPGRGAPLA V FRDPY+FK R ELFIA + +H
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIH 37
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 194 bits (474), Expect = 2e-49
Identities = 96/161 (59%), Positives = 114/161 (70%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEETMGDRGRLARASGNFATVIGHNPD 442
+TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEE GDRG+LARASGN+ATVI HNP+
Sbjct: 83 HTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPE 142
Query: 443 AKRTRVKLPSGAKKVLPSSNRGWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGHMYVVL 622
K+TRVKLPSG+KKV+ S+NR ++ + K ++ +
Sbjct: 143 TKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Query: 623 PMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRT 745
MNPVEHP GGGNHQHIGK ST++R AGRKVGLIAARRT
Sbjct: 203 AMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAARRT 243
Score = 139 bits (337), Expect = 8e-33
Identities = 63/83 (75%), Positives = 72/83 (86%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 198
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 199 VHFRDPYKFKTRKELFIAPKALH 267
V FRDPY+FK R ELFIA + +H
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIH 83
Score = 84.6 bits (200), Expect = 3e-16
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = +1
Query: 508 LVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAHEP 633
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVA P
Sbjct: 165 VVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNP 206
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 131 bits (317), Expect = 2e-30
Identities = 59/79 (74%), Positives = 68/79 (86%)
Frame = +1
Query: 31 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 210
IR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FR
Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFR 60
Query: 211 DPYKFKTRKELFIAPKALH 267
DPY+FK R ELFIA + +H
Sbjct: 61 DPYRFKKRTELFIAAEGIH 79
Score = 93.9 bits (223), Expect = 5e-19
Identities = 41/52 (78%), Positives = 46/52 (88%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEETMGDRGRLARASGNFA 418
+TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEE GDRG+LARASGN+A
Sbjct: 79 HTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYA 130
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 32.3 bits (70), Expect = 1.9
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 311 GNVMPVGAMPEGTIVCNLEETMGDRGRLARASGNFATVI 427
G+ P+GA+P GT++ N+E G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 32.3 bits (70), Expect = 1.9
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 311 GNVMPVGAMPEGTIVCNLEETMGDRGRLARASGNFATVI 427
G+ P+GA+P GT++ N+E G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 32.3 bits (70), Expect = 1.9
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 311 GNVMPVGAMPEGTIVCNLEETMGDRGRLARASGNFATVI 427
G+ P+GA+P GT++ N+E G + RA+G ++
Sbjct: 176 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 214
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 32.3 bits (70), Expect = 1.9
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 311 GNVMPVGAMPEGTIVCNLEETMGDRGRLARASGNFATVI 427
G+ P+GA+P GT++ N+E G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,904,095
Number of Sequences: 237096
Number of extensions: 2865299
Number of successful extensions: 6050
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6050
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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