Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30317
(745 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical pr... 187 8e-48
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 37 0.017
Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical pr... 31 0.65
Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical pr... 30 2.0
U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical p... 30 2.0
AC084154-12|AAK29876.1| 1137|Caenorhabditis elegans Hypothetical... 29 3.5
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z73103-14|CAL22701.1| 387|Caenorhabditis elegans Hypothetical p... 29 4.6
Z73103-13|CAA97430.1| 340|Caenorhabditis elegans Hypothetical p... 29 4.6
Z68341-7|CAL22703.1| 387|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z68341-6|CAA92769.1| 340|Caenorhabditis elegans Hypothetical pr... 29 4.6
X76113-1|CAA53719.1| 340|Caenorhabditis elegans phosphate carri... 29 4.6
U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical p... 29 4.6
Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical p... 28 6.1
Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z99281-24|CAE18027.1| 155|Caenorhabditis elegans Hypothetical p... 28 8.0
>Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical
protein B0250.1 protein.
Length = 260
Score = 187 bits (455), Expect = 8e-48
Identities = 88/161 (54%), Positives = 112/161 (69%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEETMGDRGRLARASGNFATVIGHNPD 442
+TGQF++CG KA +++GN++PVG +PEGT +CN+E GDRG +ARASGN+ATVI HNPD
Sbjct: 83 HTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKSGDRGVIARASGNYATVIAHNPD 142
Query: 443 AKRTRVKLPSGAKKVLPSSNRGWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGHMYVVL 622
K+TR++LPSGAKKV+ S NR L+ K ++ + +
Sbjct: 143 TKKTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLLKAGRSYHKYKAKRNSWPRVRGV 202
Query: 623 PMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRT 745
MNPVEHPHGGGNHQHIG STV+R SAG+KVGLIAARRT
Sbjct: 203 AMNPVEHPHGGGNHQHIGHPSTVRRDASAGKKVGLIAARRT 243
Score = 134 bits (324), Expect = 6e-32
Identities = 60/83 (72%), Positives = 68/83 (81%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 198
MGR IR QRKGAG +F SH K RKGA KLR LDYAERHGYIKG+VKDIIHDPGRGAPLA+
Sbjct: 1 MGRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAI 60
Query: 199 VHFRDPYKFKTRKELFIAPKALH 267
+ FRDPYK+KT K +A + +H
Sbjct: 61 IAFRDPYKYKTVKTTVVAAEGMH 83
Score = 76.2 bits (179), Expect = 2e-14
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +1
Query: 508 LVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAHEP 633
++G+VAGGGR DKP+LKAGR+YHKYK KRN WP VRGVA P
Sbjct: 165 MIGLVAGGGRTDKPLLKAGRSYHKYKAKRNSWPRVRGVAMNP 206
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 36.7 bits (81), Expect = 0.017
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +2
Query: 311 GNVMPVGAMPEGTIVCNLEE--TMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 469
GN P+G++ GT++ ++E TM D +A+G AT++ H D T VKLP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTM-DSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical
protein T24B8.1 protein.
Length = 134
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 425 IGHNPDAKRTRVKLPSGAKKVLPSSNRGWSVLLLE 529
IGH D +RTR LP+G KKVL + + +LL++
Sbjct: 57 IGHGSD-RRTRFVLPNGYKKVLVQNVKDLDMLLMQ 90
>Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical
protein T05F1.8 protein.
Length = 393
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 590 LTLYLWYALPAFKIGLSI-RPPPATIPTSL 504
LT W+ +FK+ +++ RPPP +P SL
Sbjct: 309 LTALQWFIYDSFKVAMNLPRPPPPQMPESL 338
>U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical
protein C33F10.12 protein.
Length = 392
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 590 LTLYLWYALPAFKIGLSI-RPPPATIPTSL 504
LT W+ +FK+ +++ RPPP +P SL
Sbjct: 309 LTALQWFIYDSFKVAMNLPRPPPPRMPESL 338
>AC084154-12|AAK29876.1| 1137|Caenorhabditis elegans Hypothetical
protein Y22D7AR.12 protein.
Length = 1137
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -2
Query: 300 VAFFPQ*TNWPV*SLRSNEELLPCL--ELVWIAEVYNSQRCTSTRVMDYILNNSLDVSMT 127
+ F + TN P+ S++S E +P + +LV + E + S R +LN D S
Sbjct: 498 IQHFRESTNMPL-SIKSTAEAIPKIKTQLVDLKEYIEGKDIKSKRAAVNVLNELKDASSQ 556
Query: 126 FSVI 115
FSV+
Sbjct: 557 FSVL 560
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAER 129
+GR R+ +KG F +HT K L+ LD A++
Sbjct: 464 IGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQ 500
>Z73103-14|CAL22701.1| 387|Caenorhabditis elegans Hypothetical
protein F01G4.6b protein.
Length = 387
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 590 LTLYLWYALPAFKIGLSI-RPPPATIPTSLCCLMA 489
LT W+ + K+ L++ RPPP +P SL +A
Sbjct: 350 LTALQWFIYDSVKVALNLPRPPPPEMPASLKAKLA 384
>Z73103-13|CAA97430.1| 340|Caenorhabditis elegans Hypothetical
protein F01G4.6a protein.
Length = 340
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 590 LTLYLWYALPAFKIGLSI-RPPPATIPTSLCCLMA 489
LT W+ + K+ L++ RPPP +P SL +A
Sbjct: 303 LTALQWFIYDSVKVALNLPRPPPPEMPASLKAKLA 337
>Z68341-7|CAL22703.1| 387|Caenorhabditis elegans Hypothetical
protein F01G4.6b protein.
Length = 387
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 590 LTLYLWYALPAFKIGLSI-RPPPATIPTSLCCLMA 489
LT W+ + K+ L++ RPPP +P SL +A
Sbjct: 350 LTALQWFIYDSVKVALNLPRPPPPEMPASLKAKLA 384
>Z68341-6|CAA92769.1| 340|Caenorhabditis elegans Hypothetical
protein F01G4.6a protein.
Length = 340
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 590 LTLYLWYALPAFKIGLSI-RPPPATIPTSLCCLMA 489
LT W+ + K+ L++ RPPP +P SL +A
Sbjct: 303 LTALQWFIYDSVKVALNLPRPPPPEMPASLKAKLA 337
>X76113-1|CAA53719.1| 340|Caenorhabditis elegans phosphate carrier
protein protein.
Length = 340
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 590 LTLYLWYALPAFKIGLSI-RPPPATIPTSLCCLMA 489
LT W+ + K+ L++ RPPP +P SL +A
Sbjct: 303 LTALQWFIYDSVKVALNLPRPPPPEMPASLKAKLA 337
>U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical
protein C56C10.12 protein.
Length = 1599
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/89 (23%), Positives = 37/89 (41%)
Frame = -2
Query: 555 QNRFVNTSTSSNNTDQPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARRPLSP 376
Q++ + + SS+NT PL+ D ++P S+ ++R+ F E ++
Sbjct: 1092 QSKGIMSMFSSDNTVSPLIPDSMLSISPFASYVMLRVEQKSFNTFYGHFFETLTKKD--- 1148
Query: 375 IVSSRLHTMVPSGIAPTGITFPTSRVAFF 289
L V + IT P R+A F
Sbjct: 1149 --KYTLDNAVKKASSKCSITVPVERLAIF 1175
>Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 130 HGYIKGVVKDIIHDPGRGAPLAVVHFR 210
HG + +V I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311
>Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 130 HGYIKGVVKDIIHDPGRGAPLAVVHFR 210
HG + +V I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311
>Z99281-24|CAE18027.1| 155|Caenorhabditis elegans Hypothetical
protein Y57G11C.44 protein.
Length = 155
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +1
Query: 67 VSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 192
+S ++RK + LD+++ G K ++KDI +D + P+
Sbjct: 1 MSEVRQRKSSIIDSDLDFSDSDGEFKEIIKDIENDQWKDKPV 42
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,065,565
Number of Sequences: 27780
Number of extensions: 412168
Number of successful extensions: 1142
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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