Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30316X
(339 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 56 2e-07
UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative; ... 56 2e-07
UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative; ... 55 4e-07
UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-05
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;... 42 0.004
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 37 0.077
UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1; A... 36 0.13
UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1; ... 35 0.31
UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;... 32 2.2
UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3; Eimer... 32 2.2
UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia lam... 31 5.1
UniRef50_Q4Q971 Cluster: Putative uncharacterized protein; n=4; ... 30 8.8
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 56.0 bits (129), Expect = 2e-07
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = -2
Query: 338 IDVDPYWPGLFAKPLEGINARDLITNIG 255
++V+PYWPGLFAK LEGIN +DLITNIG
Sbjct: 37 VEVEPYWPGLFAKALEGINVKDLITNIG 64
>UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative;
n=2; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 106
Score = 55.6 bits (128), Expect = 2e-07
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = -2
Query: 338 IDVDPYWPGLFAKPLEGINARDLITNIG 255
+D++PYWPGLF K LEGIN +DLITNIG
Sbjct: 45 VDIEPYWPGLFTKALEGINVKDLITNIG 72
>UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative;
n=1; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 54.8 bits (126), Expect = 4e-07
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = -2
Query: 338 IDVDPYWPGLFAKPLEGINARDLITNIG 255
+D++PYWP LFAK LEGIN +DLITNIG
Sbjct: 8 VDIEPYWPALFAKALEGINVKDLITNIG 35
>UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 48.4 bits (110), Expect = 3e-05
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -2
Query: 335 DVDPYWPGLFAKPLEGINARDLITNIG 255
+V+PYW LFAK LEGIN +DLITNIG
Sbjct: 61 NVEPYWRALFAKALEGINVKDLITNIG 87
>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
sapiens (Human)
Length = 114
Score = 41.5 bits (93), Expect = 0.004
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = -2
Query: 338 IDVDPYWPGLFAKPLEGINARDLITNIG 255
++V+P+WPGLFAK L +N LI N+G
Sbjct: 37 VNVEPFWPGLFAKALANVNIGSLICNVG 64
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 37.1 bits (82), Expect = 0.077
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = -2
Query: 335 DVDPYWPGLFAKPLEGINARDLITNIG 255
+++P W LFAK LEG + +DL+ N+G
Sbjct: 38 EIEPIWTSLFAKALEGKDVKDLLLNVG 64
>UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1;
Arabidopsis thaliana|Rep: 60s acidic ribosomal protein
P1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 36.3 bits (80), Expect = 0.13
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -2
Query: 338 IDVDPYWPGLFAKPLEGINARDLITNIG 255
++V+ YWP LFAK E N DLI N+G
Sbjct: 36 VNVESYWPSLFAKLCEKKNIDDLIMNVG 63
>UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 114
Score = 35.1 bits (77), Expect = 0.31
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -2
Query: 335 DVDPYWPGLFAKPLEGINARDLITNI 258
DV+P W LFAK LEG + +D++T +
Sbjct: 39 DVEPIWTTLFAKALEGKDVKDILTEV 64
>UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 103
Score = 32.3 bits (70), Expect = 2.2
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -2
Query: 338 IDVDPYWPGLFAKPLEGI 285
I+V+P+WPGLFAK L +
Sbjct: 50 INVEPFWPGLFAKSLNNV 67
>UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3;
Eimeriorina|Rep: Acidic ribosomal protein P1 -
Cryptosporidium hominis
Length = 124
Score = 32.3 bits (70), Expect = 2.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 332 VDPYWPGLFAKPLEGINARDLITNIG 255
V+PY+PGLFA+ L N D++ G
Sbjct: 49 VEPYFPGLFAQALSTTNVSDIVAGCG 74
>UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_480_102976_103332 - Giardia
lamblia ATCC 50803
Length = 118
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2
Query: 338 IDVDPYWPGLFAKPLEGINARDLITNIG 255
+ VD W LFA LEG N ++L+T +G
Sbjct: 36 VKVDSIWFTLFANYLEGKNVKELLTTLG 63
>UniRef50_Q4Q971 Cluster: Putative uncharacterized protein; n=4;
cellular organisms|Rep: Putative uncharacterized protein
- Leishmania major
Length = 3109
Score = 30.3 bits (65), Expect = 8.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 326 PYWPGLFAKPLEGINARDLITNIGLEWV 243
PYWP + + ARD ++ +GLEW+
Sbjct: 1608 PYWPTQSIESVASCAARDEVSLVGLEWL 1635
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,164,965
Number of Sequences: 1657284
Number of extensions: 2102197
Number of successful extensions: 5108
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5107
length of database: 575,637,011
effective HSP length: 88
effective length of database: 429,796,019
effective search space used: 10315104456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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