BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30316X (339 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic ri... 42 6e-04 CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein. 42 6e-04 BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, larg... 42 6e-04 BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, larg... 42 6e-04 AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal phosph... 42 6e-04 AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1 pr... 42 6e-04 CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein. 40 0.003 M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 29 4.8 CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 29 4.8 CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 29 4.8 BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 29 4.8 BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 29 4.8 BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 29 4.8 BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 29 4.8 AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 29 4.8 >M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic ribosomal phosphoprotein P1 mRNA, complete cds. ). Length = 114 Score = 41.5 bits (93), Expect = 6e-04 Identities = 15/28 (53%), Positives = 21/28 (75%) Frame = -2 Query: 338 IDVDPYWPGLFAKPLEGINARDLITNIG 255 ++V+P+WPGLFAK L +N LI N+G Sbjct: 37 VNVEPFWPGLFAKALANVNIGSLICNVG 64 Score = 28.7 bits (61), Expect = 4.8 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -1 Query: 144 SDDDMGFGLFD 112 SDDDMGFGLFD Sbjct: 104 SDDDMGFGLFD 114 >CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein. Length = 114 Score = 41.5 bits (93), Expect = 6e-04 Identities = 15/28 (53%), Positives = 21/28 (75%) Frame = -2 Query: 338 IDVDPYWPGLFAKPLEGINARDLITNIG 255 ++V+P+WPGLFAK L +N LI N+G Sbjct: 37 VNVEPFWPGLFAKALANVNIGSLICNVG 64 Score = 28.7 bits (61), Expect = 4.8 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -1 Query: 144 SDDDMGFGLFD 112 SDDDMGFGLFD Sbjct: 104 SDDDMGFGLFD 114 >BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, large, P1 protein. Length = 114 Score = 41.5 bits (93), Expect = 6e-04 Identities = 15/28 (53%), Positives = 21/28 (75%) Frame = -2 Query: 338 IDVDPYWPGLFAKPLEGINARDLITNIG 255 ++V+P+WPGLFAK L +N LI N+G Sbjct: 37 VNVEPFWPGLFAKALANVNIGSLICNVG 64 Score = 28.7 bits (61), Expect = 4.8 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -1 Query: 144 SDDDMGFGLFD 112 SDDDMGFGLFD Sbjct: 104 SDDDMGFGLFD 114 >BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, large, P1 protein. Length = 114 Score = 41.5 bits (93), Expect = 6e-04 Identities = 15/28 (53%), Positives = 21/28 (75%) Frame = -2 Query: 338 IDVDPYWPGLFAKPLEGINARDLITNIG 255 ++V+P+WPGLFAK L +N LI N+G Sbjct: 37 VNVEPFWPGLFAKALANVNIGSLICNVG 64 Score = 28.7 bits (61), Expect = 4.8 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -1 Query: 144 SDDDMGFGLFD 112 SDDDMGFGLFD Sbjct: 104 SDDDMGFGLFD 114 >AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal phosphoprotein P1 protein. Length = 113 Score = 41.5 bits (93), Expect = 6e-04 Identities = 15/28 (53%), Positives = 21/28 (75%) Frame = -2 Query: 338 IDVDPYWPGLFAKPLEGINARDLITNIG 255 ++V+P+WPGLFAK L +N LI N+G Sbjct: 37 VNVEPFWPGLFAKALANVNIGSLICNVG 64 >AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1 protein. Length = 114 Score = 41.5 bits (93), Expect = 6e-04 Identities = 15/28 (53%), Positives = 21/28 (75%) Frame = -2 Query: 338 IDVDPYWPGLFAKPLEGINARDLITNIG 255 ++V+P+WPGLFAK L +N LI N+G Sbjct: 37 VNVEPFWPGLFAKALANVNIGSLICNVG 64 Score = 28.7 bits (61), Expect = 4.8 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -1 Query: 144 SDDDMGFGLFD 112 SDDDMGFGLFD Sbjct: 104 SDDDMGFGLFD 114 >CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein. Length = 114 Score = 39.5 bits (88), Expect = 0.003 Identities = 14/28 (50%), Positives = 21/28 (75%) Frame = -2 Query: 338 IDVDPYWPGLFAKPLEGINARDLITNIG 255 ++V+P+WPGLFAK L +N LI ++G Sbjct: 37 VNVEPFWPGLFAKALANVNIGSLICDVG 64 Score = 28.7 bits (61), Expect = 4.8 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -1 Query: 144 SDDDMGFGLFD 112 SDDDMGFGLFD Sbjct: 104 SDDDMGFGLFD 114 >M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ribosomal phosphoprotein P2 mRNA, complete cds. ). Length = 115 Score = 28.7 bits (61), Expect = 4.8 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -1 Query: 144 SDDDMGFGLFD 112 SDDDMGFGLFD Sbjct: 105 SDDDMGFGLFD 115 >CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. Length = 115 Score = 28.7 bits (61), Expect = 4.8 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -1 Query: 144 SDDDMGFGLFD 112 SDDDMGFGLFD Sbjct: 105 SDDDMGFGLFD 115 >CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. Length = 115 Score = 28.7 bits (61), Expect = 4.8 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -1 Query: 144 SDDDMGFGLFD 112 SDDDMGFGLFD Sbjct: 105 SDDDMGFGLFD 115 >BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large, P2 protein. Length = 115 Score = 28.7 bits (61), Expect = 4.8 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -1 Query: 144 SDDDMGFGLFD 112 SDDDMGFGLFD Sbjct: 105 SDDDMGFGLFD 115 >BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large, P2 protein. Length = 115 Score = 28.7 bits (61), Expect = 4.8 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -1 Query: 144 SDDDMGFGLFD 112 SDDDMGFGLFD Sbjct: 105 SDDDMGFGLFD 115 >BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large, P2 protein. Length = 115 Score = 28.7 bits (61), Expect = 4.8 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -1 Query: 144 SDDDMGFGLFD 112 SDDDMGFGLFD Sbjct: 105 SDDDMGFGLFD 115 >BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large, P2 protein. Length = 115 Score = 28.7 bits (61), Expect = 4.8 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -1 Query: 144 SDDDMGFGLFD 112 SDDDMGFGLFD Sbjct: 105 SDDDMGFGLFD 115 >AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 protein. Length = 115 Score = 28.7 bits (61), Expect = 4.8 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -1 Query: 144 SDDDMGFGLFD 112 SDDDMGFGLFD Sbjct: 105 SDDDMGFGLFD 115 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 31,475,273 Number of Sequences: 237096 Number of extensions: 332669 Number of successful extensions: 677 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 666 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 677 length of database: 76,859,062 effective HSP length: 80 effective length of database: 57,891,382 effective search space used: 1852524224 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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