Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30315
(686 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC031020-1|AAH31020.1| 250|Homo sapiens interferon, gamma-induc... 61 3e-09
BC021136-1|AAH21136.1| 250|Homo sapiens interferon, gamma-induc... 61 3e-09
AK123477-1|BAC85622.1| 148|Homo sapiens protein ( Homo sapiens ... 61 3e-09
AF097362-1|AAF04618.1| 261|Homo sapiens gamma-interferon induci... 61 3e-09
AB049659-1|BAC98466.1| 250|Homo sapiens legumaturain protein. 61 3e-09
J03909-1|AAA36105.1| 303|Homo sapiens gamma-interferon-inducibl... 51 3e-06
AC007192-3|AAD22672.1| 101|Homo sapiens INIP_HUMAN [AA 4- 104] ... 33 1.3
>BC031020-1|AAH31020.1| 250|Homo sapiens interferon,
gamma-inducible protein 30 protein.
Length = 250
Score = 61.3 bits (142), Expect = 3e-09
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +3
Query: 255 VKVKMVPYGKSTHDKVDGKWSFICHHGADECYGNKVQACVLKDRNLQDTEKMEIVICLMN 434
+ V +VPYG + V G+W F C HG +EC NKV+ACVL + +++ ++C+
Sbjct: 94 LNVTLVPYGNAQEQNVSGRWEFKCQHGEEECKFNKVEACVLDELDME--LAFLTIVCMEE 151
Query: 435 QTSPDKSLDTCL 470
++SL CL
Sbjct: 152 FEDMERSLPLCL 163
Score = 32.3 bits (70), Expect = 1.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 139 KKTEDHKVKIAVYYESLCPDSKKFITTQLAPVW 237
KK+ V + +YYE+LC + F+ +L P W
Sbjct: 55 KKSNAPLVNVTLYYEALCGGCQAFLIRELFPTW 87
Score = 31.9 bits (69), Expect = 2.2
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +2
Query: 512 CASSEQGDNLLASYGDKTDAVMRPLAFVPTVIINEKYDKDVETQAFENLKAVVCRV 679
CA ++G L+ + +TDA+ P +VP V +N K +D +TQ L +VC++
Sbjct: 178 CAMGDRGMQLMHANAQRTDALQPPHEYVPWVTVNGKPLED-QTQ----LLTLVCQL 228
>BC021136-1|AAH21136.1| 250|Homo sapiens interferon,
gamma-inducible protein 30 protein.
Length = 250
Score = 61.3 bits (142), Expect = 3e-09
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +3
Query: 255 VKVKMVPYGKSTHDKVDGKWSFICHHGADECYGNKVQACVLKDRNLQDTEKMEIVICLMN 434
+ V +VPYG + V G+W F C HG +EC NKV+ACVL + +++ ++C+
Sbjct: 94 LNVTLVPYGNAQEQNVSGRWEFKCQHGEEECKFNKVEACVLDELDME--LAFLTIVCMEE 151
Query: 435 QTSPDKSLDTCL 470
++SL CL
Sbjct: 152 FEDMERSLPLCL 163
Score = 32.7 bits (71), Expect = 1.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 139 KKTEDHKVKIAVYYESLCPDSKKFITTQLAPVW 237
KK+ V + +YYE+LC + F+ +L P W
Sbjct: 55 KKSNAPLVNVTLYYEALCGGCRAFLIRELFPTW 87
Score = 31.9 bits (69), Expect = 2.2
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +2
Query: 512 CASSEQGDNLLASYGDKTDAVMRPLAFVPTVIINEKYDKDVETQAFENLKAVVCRV 679
CA ++G L+ + +TDA+ P +VP V +N K +D +TQ L +VC++
Sbjct: 178 CAMGDRGMQLMHANAQRTDALQPPHEYVPWVTVNGKPLED-QTQ----LLTLVCQL 228
>AK123477-1|BAC85622.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ41483 fis, clone BRTHA2002808, highly similar
to GAMMA-INTERFERON-INDUCIBLE PROTEIN IP-30 PRECURSOR.
).
Length = 148
Score = 61.3 bits (142), Expect = 3e-09
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +3
Query: 255 VKVKMVPYGKSTHDKVDGKWSFICHHGADECYGNKVQACVLKDRNLQDTEKMEIVICLMN 434
+ V +VPYG + V G+W F C HG +EC NKV+ACVL + +++ ++C+
Sbjct: 4 LNVTLVPYGNAQEQNVSGRWEFKCQHGEEECKFNKVEACVLDELDME--LAFLTIVCMEE 61
Query: 435 QTSPDKSLDTCL 470
++SL CL
Sbjct: 62 FEDMERSLPLCL 73
Score = 29.9 bits (64), Expect = 8.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 512 CASSEQGDNLLASYGDKTDAVMRPLAFVPTVIIN 613
CA ++G L+ + +TDA+ P +VP V +N
Sbjct: 88 CAMGDRGMQLMHANAQRTDALQPPHEYVPWVTVN 121
>AF097362-1|AAF04618.1| 261|Homo sapiens gamma-interferon inducible
lysosomal thiol reductase protein.
Length = 261
Score = 61.3 bits (142), Expect = 3e-09
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +3
Query: 255 VKVKMVPYGKSTHDKVDGKWSFICHHGADECYGNKVQACVLKDRNLQDTEKMEIVICLMN 434
+ V +VPYG + V G+W F C HG +EC NKV+ACVL + +++ ++C+
Sbjct: 105 LNVTLVPYGNAQEQNVSGRWEFKCQHGEEECKFNKVEACVLDELDME--LAFLTIVCMEE 162
Query: 435 QTSPDKSLDTCL 470
++SL CL
Sbjct: 163 FEDMERSLPLCL 174
Score = 32.7 bits (71), Expect = 1.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 139 KKTEDHKVKIAVYYESLCPDSKKFITTQLAPVW 237
KK+ V + +YYE+LC + F+ +L P W
Sbjct: 66 KKSNAPLVNVTLYYEALCGGCRAFLIRELFPTW 98
Score = 31.9 bits (69), Expect = 2.2
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +2
Query: 512 CASSEQGDNLLASYGDKTDAVMRPLAFVPTVIINEKYDKDVETQAFENLKAVVCRV 679
CA ++G L+ + +TDA+ P +VP V +N K +D +TQ L +VC++
Sbjct: 189 CAMGDRGMQLMHANAQRTDALQPPHEYVPWVTVNGKPLED-QTQ----LLTLVCQL 239
>AB049659-1|BAC98466.1| 250|Homo sapiens legumaturain protein.
Length = 250
Score = 61.3 bits (142), Expect = 3e-09
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +3
Query: 255 VKVKMVPYGKSTHDKVDGKWSFICHHGADECYGNKVQACVLKDRNLQDTEKMEIVICLMN 434
+ V +VPYG + V G+W F C HG +EC NKV+ACVL + +++ ++C+
Sbjct: 94 LNVTLVPYGNAQEQNVSGRWEFKCQHGEEECKFNKVEACVLDELDME--LAFLTIVCMEE 151
Query: 435 QTSPDKSLDTCL 470
++SL CL
Sbjct: 152 FEDMERSLPLCL 163
Score = 33.5 bits (73), Expect = 0.72
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +2
Query: 512 CASSEQGDNLLASYGDKTDAVMRPLAFVPTVIINEKYDKDVETQAFENLKAVVCRV 679
CA ++G L+ + +TDA+ P +VP V +N K +D +TQ L A+VC++
Sbjct: 178 CAMGDRGMQLMHANAQRTDALQPPHEYVPWVTVNGKPLED-QTQ----LLALVCQL 228
Score = 32.7 bits (71), Expect = 1.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 139 KKTEDHKVKIAVYYESLCPDSKKFITTQLAPVW 237
KK+ V + +YYE+LC + F+ +L P W
Sbjct: 55 KKSNAPLVNVTLYYEALCGGCRAFLIRELFPTW 87
>J03909-1|AAA36105.1| 303|Homo sapiens gamma-interferon-inducible
protein precursor protein.
Length = 303
Score = 51.2 bits (117), Expect = 3e-06
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +3
Query: 255 VKVKMVPYGKSTHDKVDGKWSFICHHGADECYGNKVQACVLKDRNLQ 395
+ V VPYG + V G+W F C G +EC NKV+ACVL + +++
Sbjct: 105 LNVTSVPYGNAQEQNVSGRWEFKCQLGEEECKFNKVEACVLDELDME 151
Score = 32.7 bits (71), Expect = 1.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 139 KKTEDHKVKIAVYYESLCPDSKKFITTQLAPVW 237
KK+ V + +YYE+LC + F+ +L P W
Sbjct: 66 KKSNAPLVNVTLYYEALCGGCRAFLIRELFPTW 98
>AC007192-3|AAD22672.1| 101|Homo sapiens INIP_HUMAN [AA 4- 104]
protein.
Length = 101
Score = 32.7 bits (71), Expect = 1.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 139 KKTEDHKVKIAVYYESLCPDSKKFITTQLAPVW 237
KK+ V + +YYE+LC + F+ +L P W
Sbjct: 63 KKSNAPLVNVTLYYEALCGGCRAFLIRELFPTW 95
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,106,877
Number of Sequences: 237096
Number of extensions: 2441237
Number of successful extensions: 6764
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6744
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -