Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30313
(735 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95559-20|CAB63360.2| 263|Caenorhabditis elegans Hypothetical p... 96 3e-20
L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical pr... 96 3e-20
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 32 0.48
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 29 2.6
Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 29 4.5
>Z95559-20|CAB63360.2| 263|Caenorhabditis elegans Hypothetical
protein Y41E3.10a protein.
Length = 263
Score = 95.9 bits (228), Expect = 3e-20
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = +1
Query: 502 KPIRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEKIQ-EFEDFVQSVD 678
K +R+IEM+GL+WG +KL+P+GYGI KLQI+ VIED KVSVD L EKI +FED VQSVD
Sbjct: 197 KLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEKITGDFEDHVQSVD 256
Query: 679 IAAFNKI 699
I AFNKI
Sbjct: 257 IVAFNKI 263
Score = 61.3 bits (142), Expect = 7e-10
Identities = 31/58 (53%), Positives = 35/58 (60%)
Frame = +2
Query: 329 DLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEME 502
DLFGS L AYA KK+ K IAKSS++LDVKPWDDETD+ EME
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEME 196
>L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical
protein F54H12.6 protein.
Length = 213
Score = 95.9 bits (228), Expect = 3e-20
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = +1
Query: 502 KPIRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEKIQ-EFEDFVQSVD 678
K +R+IEM+GL+WG +KL+P+GYGI KLQI+ VIED KVSVD L EKI +FED VQSVD
Sbjct: 147 KLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEKITGDFEDHVQSVD 206
Query: 679 IAAFNKI 699
I AFNKI
Sbjct: 207 IVAFNKI 213
Score = 72.9 bits (171), Expect = 2e-13
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +3
Query: 42 VGDVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAP-AANLPHVLRWYNQIAS 218
V DVK+ GL N LAE+++ +G+ S D Q+F +G AP A+ P+V RWY +AS
Sbjct: 2 VADVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVAS 61
Query: 219 YTSAERKTWS 248
YT AERKTW+
Sbjct: 62 YTDAERKTWA 71
Score = 65.7 bits (153), Expect = 3e-11
Identities = 32/58 (55%), Positives = 37/58 (63%)
Frame = +2
Query: 329 DLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEME 502
DLFGS L AYA+KK+KK IAKSS++LDVKPWDDETD+ EME
Sbjct: 89 DLFGSDDEEEDAEKAKIVEERLAAYAEKKAKKAGPIAKSSVILDVKPWDDETDLGEME 146
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 31.9 bits (69), Expect = 0.48
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -1
Query: 252 PETMFCVQPKCMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 94
P + C QP CM + + VV+ PAP Q + Q +++C+QT+ Q
Sbjct: 124 PAPVQC-QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQPIQQ 171
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +1
Query: 520 EMEGLLWGASKLVPVGYGINKLQIMC----VIEDDKVSVDLLTEKIQEFEDFVQ 669
E E L G+ LVPV N+LQI+C DD V + T + E D ++
Sbjct: 14 EDENELGGSGILVPVDISTNELQILCNQLLGSSDDPVPISFFTTEGAEIVDSIR 67
>Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 29.1 bits (62), Expect = 3.4
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 458 DVKPWDDETDMKEMENQYAL 517
D +PWD+ D++++EN Y +
Sbjct: 601 DYRPWDNNNDIQQIENNYVV 620
>Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 29.1 bits (62), Expect = 3.4
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 458 DVKPWDDETDMKEMENQYAL 517
D +PWD+ D++++EN Y +
Sbjct: 601 DYRPWDNNNDIQQIENNYVV 620
>Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical
protein ZK1086.1b protein.
Length = 770
Score = 29.1 bits (62), Expect = 3.4
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 458 DVKPWDDETDMKEMENQYAL 517
D +PWD+ D++++EN Y +
Sbjct: 638 DYRPWDNNNDIQQIENNYVV 657
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -1
Query: 252 PETMFCVQPKCMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 94
P + C QP CM + + VV+ PA Q + Q +++C+QT+ Q
Sbjct: 124 PAPVQC-QPSCMPACEQSCVVQ----TPAAVQCVPQCQQQCQQQCVQTQPIQQ 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,263,744
Number of Sequences: 27780
Number of extensions: 311424
Number of successful extensions: 927
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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