Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30308X
         (436 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    24   0.72 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.3  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   1.3  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   3.8  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   6.7  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   6.7  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    20   8.9  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.8 bits (49), Expect = 0.72
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 422 VKGICDDICVLCQFGKAIEFCENF 351
           V G+ +++C LCQ   +I   +NF
Sbjct: 214 VHGVHNELCNLCQVANSIYGFQNF 237


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 41   KIVWPYLVYLNF 76
            KIVW +LVY++F
Sbjct: 989  KIVWLHLVYISF 1000


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 41  KIVWPYLVYLNF 76
           KIVW +LVY++F
Sbjct: 270 KIVWLHLVYISF 281


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 139 VIPEIKMTEDKEVTVETNGQEENAKTEN 222
           V+PE+   E+ +  V+ +  E   KTE+
Sbjct: 158 VVPEVGGVEEAKGPVDLSKSEPEKKTES 185


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 185 KPMDKRRTRKPKIQKTKPNW 244
           K + ++ T   ++ KTKP W
Sbjct: 267 KTIKEKYTEDEELNKTKPIW 286


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 198 LSIGFNSYLFVLGHFDFW 145
           L + FNSY++   H  F+
Sbjct: 60  LHVCFNSYMYAFTHIFFF 77


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 318 QIKLDDGWVPLEILTKFNRLAKLT 389
           Q+KL   +VP+ +L+K   +A ++
Sbjct: 3   QVKLHKHYVPIILLSKILGIAPIS 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,798
Number of Sequences: 336
Number of extensions: 1859
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)