Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30308X
(436 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907... 57 5e-09
03_01_0389 + 3021849-3022136,3022237-3022753,3022835-3022988,302... 56 1e-08
01_06_0756 - 31731607-31731752,31732368-31732467,31732716-317329... 56 2e-08
12_01_0752 - 6798938-6799312,6799628-6799768,6800257-6800325,680... 48 3e-06
09_06_0123 - 20997498-20997512,20998015-20998100,20999066-209991... 48 4e-06
04_04_0385 - 24858580-24858721,24858772-24858850,24859155-248593... 47 8e-06
02_04_0575 - 24000191-24000302,24000710-24000788,24001017-240011... 46 2e-05
03_06_0758 - 36052261-36052301,36052463-36052697,36052895-360529... 45 2e-05
10_08_0151 - 15229235-15229243,15230032-15230103,15230369-152304... 44 4e-05
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 44 5e-05
08_02_1446 + 27156449-27156790,27157961-27158042,27158698-271587... 44 7e-05
03_05_0049 - 20277234-20277251,20277670-20277795,20278085-202781... 39 0.002
02_02_0331 + 9017291-9019084,9019205-9019402,9020014-9020184,902... 29 1.6
11_06_0413 - 23242228-23242517,23242732-23243180,23243338-23244458 29 2.2
01_06_1540 - 38111557-38111985,38112087-38112311,38112494-381128... 29 2.2
08_02_0243 - 14708055-14708416,14708487-14709324,14709482-147103... 28 2.9
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 28 2.9
12_01_0313 + 2388488-2388560,2389285-2389462,2390221-2390331,239... 27 5.0
11_06_0126 - 20378611-20379719,20380081-20381239 27 6.6
05_05_0339 + 24213179-24213821,24214402-24214623,24215035-242152... 27 6.6
02_05_0959 + 33086498-33086544,33087295-33087967,33088665-330890... 27 6.6
01_07_0128 + 41238510-41239146,41239420-41239461,41240076-412402... 27 6.6
11_06_0412 - 23235670-23236512,23236804-23237838 27 8.7
>01_01_1145 +
9073973-9074281,9075440-9075998,9076088-9076241,
9077475-9077565,9077722-9077793,9077879-9078390,
9078854-9078923,9079514-9079579,9080266-9080570,
9080872-9081006,9081141-9081204,9081429-9081574,
9081669-9081773,9082310-9082490
Length = 922
Score = 57.2 bits (132), Expect = 5e-09
Identities = 27/59 (45%), Positives = 36/59 (61%)
Frame = +3
Query: 255 IRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 431
+ QVEYYF D NL D FL+ + + GWVP+ + FNRL K+T D +I AL S+
Sbjct: 333 LTQVEYYFSDSNLDHDNFLKSLMD-EHGWVPISKVADFNRLKKMTTDIQLIVEALANSS 390
>03_01_0389 +
3021849-3022136,3022237-3022753,3022835-3022988,
3023076-3023166,3024556-3024627,3026366-3026689
Length = 481
Score = 56.0 bits (129), Expect = 1e-08
Identities = 25/59 (42%), Positives = 38/59 (64%)
Frame = +3
Query: 255 IRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 431
++Q+EYYF D NL +D FL+ + D GWVPL ++ FN++ KLT + I + +ST
Sbjct: 312 LKQIEYYFSDDNLCKDIFLRRHMD-DQGWVPLPLIAGFNQVKKLTNNVQFILETVLQST 369
>01_06_0756 -
31731607-31731752,31732368-31732467,31732716-31732943,
31733390-31733474,31733583-31733662,31733755-31733826,
31733964-31734058,31735442-31735523,31735646-31735927
Length = 389
Score = 55.6 bits (128), Expect = 2e-08
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Frame = +3
Query: 249 CD--IRQVEYYFGDVNLHRDKFLQEQIKLD-DGWVPLEILTKFNRLAKLTEDTDVIANAL 419
CD ++QVEYYF D NL D+FL + +K + G+VP+ ++ F R+ KL++D +I AL
Sbjct: 88 CDRIVKQVEYYFSDENLPTDEFLIKFVKKNKQGFVPIGVIASFRRMKKLSQDLSIIEAAL 147
Query: 420 NKST 431
S+
Sbjct: 148 RTSS 151
>12_01_0752 -
6798938-6799312,6799628-6799768,6800257-6800325,
6800407-6800454,6801740-6801836,6801922-6802001,
6802099-6802170,6802335-6802429,6802853-6802934,
6805476-6805853
Length = 478
Score = 48.0 bits (109), Expect = 3e-06
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +3
Query: 258 RQVEYYFGDVNLHRDKFLQEQIKLD-DGWVPLEILTKFNRLAKLTEDTDVIANALNKST 431
+QVEYYF D+NL + L I D +G+VP+ ++ FN++ L + ++A AL S+
Sbjct: 125 KQVEYYFSDINLATTEHLMRFITKDPEGYVPITVIAGFNKIKALVHNNSMLAAALRTSS 183
>09_06_0123 -
20997498-20997512,20998015-20998100,20999066-20999198,
20999264-20999341,21000130-21000216,21001164-21001254,
21001338-21001488,21001567-21002296,21002404-21002820
Length = 595
Score = 47.6 bits (108), Expect = 4e-06
Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Frame = +3
Query: 252 DIR-QVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLA 380
DIR Q+E+YF NL D FL+ Q+ D GWV ++++TKFNR A
Sbjct: 423 DIRTQIEFYFSTNNLCHDTFLRRQMD-DQGWVHIDVITKFNREA 465
>04_04_0385 -
24858580-24858721,24858772-24858850,24859155-24859302,
24859939-24860239,24860327-24860407,24860727-24860875,
24861073-24861215,24861404-24861556,24861664-24861742,
24861851-24861916
Length = 446
Score = 46.8 bits (106), Expect = 8e-06
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Frame = +3
Query: 255 IRQVEYYFGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAK-LTEDTDVIANALNKS 428
+RQVE+YF D NL RD FL++ + + +DG V L ++ F+R+ K L D DV + +
Sbjct: 20 LRQVEFYFSDSNLPRDNFLRKTVEESEDGLVSLALICSFSRMKKHLGLDLDVKQETMPEE 79
Query: 429 T 431
T
Sbjct: 80 T 80
>02_04_0575 -
24000191-24000302,24000710-24000788,24001017-24001164,
24001704-24002100,24002188-24002268,24002688-24002836,
24003152-24003294,24003643-24003795,24003912-24003990,
24004113-24004175
Length = 467
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/42 (50%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +3
Query: 255 IRQVEYYFGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRL 377
+RQVE+YF D NL RDKFL+E + + +DG V L ++ F R+
Sbjct: 19 LRQVEFYFSDSNLPRDKFLRETVEQREDGLVSLALICSFARM 60
>03_06_0758 -
36052261-36052301,36052463-36052697,36052895-36052966,
36056477-36056567,36056650-36056872,36056964-36057300,
36057406-36057588
Length = 393
Score = 45.2 bits (102), Expect = 2e-05
Identities = 19/59 (32%), Positives = 35/59 (59%)
Frame = +3
Query: 255 IRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 431
++Q+E+YF NL D FL+ + D GWV + ++ FN++ + T+D I + + S+
Sbjct: 240 LKQIEFYFSKDNLCTDVFLRRNMD-DQGWVNIALIAGFNKVQESTDDLQYIKDTIQSSS 297
>10_08_0151 -
15229235-15229243,15230032-15230103,15230369-15230459,
15230553-15230695,15231910-15232022,15232171-15232315
Length = 190
Score = 44.4 bits (100), Expect = 4e-05
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +3
Query: 261 QVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 431
Q+EYYF + NL D +L+ + GWVPL ++ F R+ LT D + + ++ ST
Sbjct: 128 QIEYYFSENNLCSDVYLKGWMN-QQGWVPLTLVAGFPRVQALTTDYETVQRSVLSST 183
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 44.0 bits (99), Expect = 5e-05
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +3
Query: 255 IRQVEYYFGDVNLHRDKFLQEQIKLD-DGWVPLEILTKFNRLAKLTEDTDVIANALNKST 431
+ +VEYYF D+NL + L I D +G+VP+ ++ F ++ L + ++A+AL S+
Sbjct: 146 VPKVEYYFSDINLATTEHLMRFITKDPEGYVPISVVAGFKKIKALIQSNAMLASALRTSS 205
>08_02_1446 +
27156449-27156790,27157961-27158042,27158698-27158792,
27159421-27159492,27159572-27159651,27159728-27159827,
27160064-27160141,27160408-27160455,27160570-27160638,
27161035-27161175,27161262-27161516
Length = 453
Score = 43.6 bits (98), Expect = 7e-05
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 IRQVEYYFGDVNLHRDKFLQE-QIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
++QVE+YF DVNL + L + I+ +G+VP+ ++ F ++ +L + +A L S
Sbjct: 112 VKQVEFYFSDVNLATTEHLMKFMIRDPEGFVPMSVVASFRKIRELVSERSALAAVLRTS 170
>03_05_0049 -
20277234-20277251,20277670-20277795,20278085-20278153,
20278233-20278280,20278413-20278494,20278583-20278662,
20278764-20278835,20278912-20279006,20280396-20280477,
20280604-20280963
Length = 343
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 255 IRQVEYYFGDVNLHRDKFLQEQIKLD-DGWVPLEILTKFNRLAKLTEDTDVIANALNKST 431
I+QVEY F D NL + FL + + D + +VP+ +++ + ++ + ++ NAL S+
Sbjct: 118 IKQVEYQFSDTNLVANDFLMKIMNKDPECYVPMSVISSWKKIKAMGVTNQLLVNALRTSS 177
>02_02_0331 +
9017291-9019084,9019205-9019402,9020014-9020184,
9020292-9020435,9020552-9020764,9020859-9021929,
9022365-9022391
Length = 1205
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 112 VFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSE 228
V +KES PE + D++ T +EEN K N E
Sbjct: 324 VMPVKESDDKKPEASVQRDEKKASSTEMEEENGKRSNEE 362
>11_06_0413 - 23242228-23242517,23242732-23243180,23243338-23244458
Length = 619
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 23 FKSYFFKIVWPYLVYLNFEASINLFSEIRRYFPLKNLIVL 142
FK+ F VW L+ ++F +SIN S YF L+N + L
Sbjct: 77 FKNQLFP-VWA-LMLVSFRSSINCLSSYGTYFELRNALKL 114
>01_06_1540 -
38111557-38111985,38112087-38112311,38112494-38112854,
38112965-38113058,38113136-38113369,38113891-38113945
Length = 465
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = -2
Query: 321 FVLAEIYLDVDLHHQNNIRLAEYRNIQXXXXXXXXXFRVLLLSIGFNSYLFVLGHFDFWN 142
F+ +E ++V L + ++ +A Y+ + +++ FN+ L +LG F FW
Sbjct: 346 FINSEYTVNVPLIQRGSVTVAPYKLVLRTVVVIATTVVAMMIPF-FNAVLGLLGAFSFWP 404
Query: 141 NTMRF 127
T+ F
Sbjct: 405 LTVYF 409
>08_02_0243 -
14708055-14708416,14708487-14709324,14709482-14710323,
14710466-14710520,14711535-14711549,14713030-14713033,
14713340-14713424,14714045-14714084
Length = 746
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -1
Query: 412 FAMTSVSSVSLARRLNFVRISNGTHPSSNFICSCRNLSRCRFT 284
F + + S+S RRL +++ + P+S +C+ R+L T
Sbjct: 635 FRLDELDSLSKIRRLLLIKLEKASPPASPVLCNKRHLKELGLT 677
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +1
Query: 124 KESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETELDIAIFGKSN 270
KE+++++ + + +K ++ET E+ SEDE E+D+ G+S+
Sbjct: 2432 KENNKMVGVVVDSPEKHTSLETLETREHV---TSEDEEEIDVGHLGESS 2477
>12_01_0313 +
2388488-2388560,2389285-2389462,2390221-2390331,
2391280-2391362,2391826-2392027,2392078-2392101,
2392234-2392408,2392482-2392683,2393897-2394036
Length = 395
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/33 (33%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = +1
Query: 148 EIKMTEDKEVTVETNGQEE-NAKTENSEDETEL 243
+++++E+K+ T+E N +++ +A TE +DE L
Sbjct: 127 QLQVSEEKDTTIEENSEKKWHAHTEIEDDENVL 159
>11_06_0126 - 20378611-20379719,20380081-20381239
Length = 755
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 181 QLPLCPRSF*FLE*HDEIL*WKIPSDFRKQVY 86
Q+PL PR+ L+ H+ L +PS+F +Y
Sbjct: 407 QIPLLPRNLSALDIHNNSLSGPLPSEFGVNIY 438
>05_05_0339 +
24213179-24213821,24214402-24214623,24215035-24215282,
24215385-24215524,24215579-24215753
Length = 475
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 255 IRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANAL 419
++ VE GD L+ D+ L++ L+ PL L L + D D++ N L
Sbjct: 108 LKYVEARLGDRTLYADEILRDGFCLNMVDTPLCPLKVVTNLQEAVWDADIVINGL 162
>02_05_0959 +
33086498-33086544,33087295-33087967,33088665-33089058,
33089140-33089210,33089373-33089497,33089705-33089821,
33094128-33094238,33094321-33094413,33094726-33094984,
33095067-33095189
Length = 670
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/35 (31%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +1
Query: 136 RVIPEIKMTEDKEVTVETN-GQEENAKTENSEDET 237
R + ++ + + ++ +TN G+ E++K+ NS+DET
Sbjct: 63 RTVADVSKPDFRGLSGKTNLGRSESSKSNNSDDET 97
>01_07_0128 +
41238510-41239146,41239420-41239461,41240076-41240297,
41240909-41241156,41241296-41241435,41241904-41242027
Length = 470
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 255 IRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANAL 419
++ VE GD L+ D+ L++ L+ PL L L + D D++ N L
Sbjct: 106 LKYVEARLGDRTLYADEILRDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGL 160
>11_06_0412 - 23235670-23236512,23236804-23237838
Length = 625
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 23 FKSYFFKIVWPYLVYLNFEASINLFSEIRRYFPLKNLIVL 142
FK+ F VW L+ ++F +SIN S +F L+N + L
Sbjct: 77 FKNQLFP-VWA-LMLVSFRSSINCLSSYGTFFELRNSLKL 114
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,691,310
Number of Sequences: 37544
Number of extensions: 171875
Number of successful extensions: 590
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 826450812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -