Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30308X
(436 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13697-1|CAA31985.1| 408|Homo sapiens protein ( Human mRNA for ... 91 1e-18
J04205-1|AAA51885.1| 408|Homo sapiens La protein protein. 91 1e-18
BT009862-1|AAP88864.1| 408|Homo sapiens Sjogren syndrome antige... 91 1e-18
BC020818-1|AAH20818.1| 408|Homo sapiens Sjogren syndrome antige... 91 1e-18
BC001289-1|AAH01289.1| 408|Homo sapiens Sjogren syndrome antige... 91 1e-18
AC009967-1|AAY14868.1| 408|Homo sapiens unknown protein. 91 1e-18
BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein. 67 3e-11
DQ185046-1|ABD14426.1| 48|Homo sapiens Sjogren syndrome antige... 60 4e-09
BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein do... 49 6e-06
AK091465-1|BAC03668.1| 816|Homo sapiens protein ( Homo sapiens ... 49 6e-06
AB018274-1|BAA34451.1| 1096|Homo sapiens KIAA0731 protein protein. 49 6e-06
BC110300-1|AAI10301.1| 335|Homo sapiens LARP2 protein protein. 48 1e-05
AK001240-1|BAA91576.1| 328|Homo sapiens protein ( Homo sapiens ... 48 1e-05
BC014018-1|AAH14018.1| 491|Homo sapiens La ribonucleoprotein do... 48 2e-05
BC009446-1|AAH09446.1| 491|Homo sapiens La ribonucleoprotein do... 48 2e-05
BC006082-1|AAH06082.1| 491|Homo sapiens La ribonucleoprotein do... 48 2e-05
AF443829-1|AAN76711.1| 491|Homo sapiens acheron protein. 48 2e-05
AF443828-1|AAN76710.1| 491|Homo sapiens acheron protein. 48 2e-05
AK092764-1|BAC03970.1| 575|Homo sapiens protein ( Homo sapiens ... 47 3e-05
AK002058-1|BAA92061.1| 491|Homo sapiens protein ( Homo sapiens ... 44 2e-04
BC063479-1|AAH63479.1| 374|Homo sapiens LARP4 protein protein. 37 0.026
BC022377-1|AAH22377.1| 188|Homo sapiens LARP4 protein protein. 37 0.026
AY004310-1|AAF86614.1| 375|Homo sapiens c-Mpl binding protein p... 37 0.026
AK125113-1|BAC86052.1| 654|Homo sapiens protein ( Homo sapiens ... 37 0.026
L34363-1|AAA20872.1| 1298|Homo sapiens X-linked nuclear protein ... 31 2.3
AY528411-1|AAS18315.1| 1212|Homo sapiens G protein coupled recep... 30 3.0
AL355587-1|CAI15725.1| 1215|Homo sapiens novel protein protein. 30 3.0
AL161654-1|CAI16106.1| 1215|Homo sapiens novel protein protein. 30 3.0
AL139821-1|CAI16833.1| 1215|Homo sapiens novel protein protein. 30 3.0
AB032962-1|BAA86450.2| 596|Homo sapiens KIAA1136 protein protein. 30 3.0
D86971-1|BAA13207.2| 751|Homo sapiens KIAA0217 protein. 30 4.0
BC131630-1|AAI31631.1| 738|Homo sapiens La ribonucleoprotein do... 30 4.0
AL359878-4|CAI13663.2| 738|Homo sapiens La ribonucleoprotein do... 30 4.0
AL157709-4|CAI39596.2| 738|Homo sapiens La ribonucleoprotein do... 30 4.0
U68140-1|AAB70457.1| 856|Homo sapiens nuclear VCP-like protein ... 29 6.9
BC117557-1|AAI17558.1| 1098|Homo sapiens GON4L protein protein. 29 6.9
BC005897-1|AAH05897.1| 236|Homo sapiens Unknown (protein for IM... 29 6.9
AY335491-1|AAR01261.1| 2241|Homo sapiens GON4L isoform C protein. 29 6.9
AY335490-1|AAR01260.1| 2241|Homo sapiens GON4L isoform A protein. 29 6.9
AL162734-1|CAH71640.1| 1078|Homo sapiens novel protein protein. 29 6.9
AL139128-1|CAH69942.1| 1078|Homo sapiens novel protein protein. 29 6.9
AB195687-1|BAF51556.1| 2240|Homo sapiens YY1AP-related protein1 ... 29 6.9
AB046826-1|BAB13432.1| 1095|Homo sapiens KIAA1606 protein protein. 29 6.9
Z84487-2|CAI42674.1| 2492|Homo sapiens alpha thalassemia/mental ... 29 9.1
Z84487-1|CAI42675.1| 2454|Homo sapiens alpha thalassemia/mental ... 29 9.1
U97103-1|AAC51657.1| 2375|Homo sapiens X-linked nuclear protein ... 29 9.1
U75653-1|AAC51655.1| 2492|Homo sapiens zinc finger helicase prot... 29 9.1
U72938-1|AAB49971.2| 2454|Homo sapiens putative DNA dependent AT... 29 9.1
U72937-1|AAB49970.2| 2492|Homo sapiens putative DNA dependent AT... 29 9.1
U72936-1|AAB49969.1| 2288|Homo sapiens putative DNA dependent AT... 29 9.1
U72935-3|AAB40700.1| 2288|Homo sapiens putative DNA dependent AT... 29 9.1
U72935-2|AAB40699.1| 2337|Homo sapiens putative DNA dependent AT... 29 9.1
U72935-1|AAB40698.1| 2375|Homo sapiens putative DNA dependent AT... 29 9.1
U09820-1|AAC50069.1| 1641|Homo sapiens helicase II protein. 29 9.1
EF467914-1|ABO43036.1| 2492|Homo sapiens alpha thalassemia/menta... 29 9.1
AL121874-2|CAI40710.1| 2492|Homo sapiens alpha thalassemia/menta... 29 9.1
AL121874-1|CAB90351.2| 2454|Homo sapiens alpha thalassemia/menta... 29 9.1
AL109753-2|CAI43115.1| 2492|Homo sapiens alpha thalassemia/menta... 29 9.1
AL109753-1|CAI43116.1| 2454|Homo sapiens alpha thalassemia/menta... 29 9.1
AB209545-1|BAD92782.1| 1224|Homo sapiens transcriptional regulat... 29 9.1
AB102641-1|BAC81110.1| 2492|Homo sapiens ATRX protein. 29 9.1
>X13697-1|CAA31985.1| 408|Homo sapiens protein ( Human mRNA for
ribonucleoprotein SS-B/La. ).
Length = 408
Score = 91.5 bits (217), Expect = 1e-18
Identities = 41/56 (73%), Positives = 48/56 (85%)
Frame = +3
Query: 261 QVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
Q+EYYFGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS
Sbjct: 20 QIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKS 75
>J04205-1|AAA51885.1| 408|Homo sapiens La protein protein.
Length = 408
Score = 91.5 bits (217), Expect = 1e-18
Identities = 41/56 (73%), Positives = 48/56 (85%)
Frame = +3
Query: 261 QVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
Q+EYYFGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS
Sbjct: 20 QIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKS 75
>BT009862-1|AAP88864.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 91.5 bits (217), Expect = 1e-18
Identities = 41/56 (73%), Positives = 48/56 (85%)
Frame = +3
Query: 261 QVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
Q+EYYFGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS
Sbjct: 20 QIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKS 75
>BC020818-1|AAH20818.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 91.5 bits (217), Expect = 1e-18
Identities = 41/56 (73%), Positives = 48/56 (85%)
Frame = +3
Query: 261 QVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
Q+EYYFGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS
Sbjct: 20 QIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKS 75
>BC001289-1|AAH01289.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 91.5 bits (217), Expect = 1e-18
Identities = 41/56 (73%), Positives = 48/56 (85%)
Frame = +3
Query: 261 QVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
Q+EYYFGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS
Sbjct: 20 QIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKS 75
>AC009967-1|AAY14868.1| 408|Homo sapiens unknown protein.
Length = 408
Score = 91.5 bits (217), Expect = 1e-18
Identities = 41/56 (73%), Positives = 48/56 (85%)
Frame = +3
Query: 261 QVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
Q+EYYFGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS
Sbjct: 20 QIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKS 75
>BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein.
Length = 582
Score = 66.9 bits (156), Expect = 3e-11
Identities = 30/58 (51%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = +3
Query: 258 RQVEYYFGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
+QV+++FGD NLH+D+FL+EQI K DG+V + +L FN++ KLT D +IA AL S
Sbjct: 40 KQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSS 97
>DQ185046-1|ABD14426.1| 48|Homo sapiens Sjogren syndrome antigen B
protein.
Length = 48
Score = 59.7 bits (138), Expect = 4e-09
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +3
Query: 261 QVEYYFGDVNLHRDKFLQEQIKLDDGWVP 347
Q+EYYFGD NL RDKFL+EQIKLD+GWVP
Sbjct: 20 QIEYYFGDFNLPRDKFLKEQIKLDEGWVP 48
>BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein
domain family, member 1 protein.
Length = 1019
Score = 49.2 bits (112), Expect = 6e-06
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = +3
Query: 258 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
RQ+EYYF NL RD FL+ ++ DG++P+ ++ F+R+ LT D +I AL S
Sbjct: 332 RQIEYYFSVDNLERDFFLRRKMDA-DGFLPITLIASFHRVQALTTDISLIFAALKDS 387
>AK091465-1|BAC03668.1| 816|Homo sapiens protein ( Homo sapiens
cDNA FLJ34146 fis, clone FCBBF3011889, weakly similar to
Drosophila melanogaster La related protein (larp) mRNA.
).
Length = 816
Score = 49.2 bits (112), Expect = 6e-06
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = +3
Query: 258 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
RQ+EYYF NL RD FL+ ++ DG++P+ ++ F+R+ LT D +I AL S
Sbjct: 409 RQIEYYFSVDNLERDFFLRRKMDA-DGFLPITLIASFHRVQALTTDISLIFAALKDS 464
>AB018274-1|BAA34451.1| 1096|Homo sapiens KIAA0731 protein protein.
Length = 1096
Score = 49.2 bits (112), Expect = 6e-06
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = +3
Query: 258 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
RQ+EYYF NL RD FL+ ++ DG++P+ ++ F+R+ LT D +I AL S
Sbjct: 409 RQIEYYFSVDNLERDFFLRRKMDA-DGFLPITLIASFHRVQALTTDISLIFAALKDS 464
>BC110300-1|AAI10301.1| 335|Homo sapiens LARP2 protein protein.
Length = 335
Score = 48.4 bits (110), Expect = 1e-05
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = +3
Query: 258 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 431
RQ+EYYF NL RD FL+ ++ + G++P+ ++ F R+ LT + ++I AL ST
Sbjct: 221 RQIEYYFSVENLERDFFLRGKMD-EQGFLPISLIAGFQRVQALTTNLNLILEALKDST 277
>AK001240-1|BAA91576.1| 328|Homo sapiens protein ( Homo sapiens
cDNA FLJ10378 fis, clone NT2RM2002004, weakly similar to
LA PROTEIN HOMOLOG. ).
Length = 328
Score = 48.4 bits (110), Expect = 1e-05
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = +3
Query: 258 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 431
RQ+EYYF NL RD FL+ ++ + G++P+ ++ F R+ LT + ++I AL ST
Sbjct: 27 RQIEYYFSVENLERDFFLRGKMD-EQGFLPISLIAGFQRVQALTTNLNLILEALKDST 83
>BC014018-1|AAH14018.1| 491|Homo sapiens La ribonucleoprotein
domain family, member 6 protein.
Length = 491
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 IRQVEYYFGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
+ Q+E+YF D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S
Sbjct: 97 VDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYS 155
>BC009446-1|AAH09446.1| 491|Homo sapiens La ribonucleoprotein
domain family, member 6 protein.
Length = 491
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 IRQVEYYFGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
+ Q+E+YF D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S
Sbjct: 97 VDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYS 155
>BC006082-1|AAH06082.1| 491|Homo sapiens La ribonucleoprotein
domain family, member 6 protein.
Length = 491
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 IRQVEYYFGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
+ Q+E+YF D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S
Sbjct: 97 VDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYS 155
>AF443829-1|AAN76711.1| 491|Homo sapiens acheron protein.
Length = 491
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 IRQVEYYFGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
+ Q+E+YF D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S
Sbjct: 97 VDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYS 155
>AF443828-1|AAN76710.1| 491|Homo sapiens acheron protein.
Length = 491
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 IRQVEYYFGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
+ Q+E+YF D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S
Sbjct: 97 VDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYS 155
>AK092764-1|BAC03970.1| 575|Homo sapiens protein ( Homo sapiens
cDNA FLJ35445 fis, clone SMINT2003551, weakly similar to
Drosophila melanogaster La related protein (larp) mRNA.
).
Length = 575
Score = 46.8 bits (106), Expect = 3e-05
Identities = 22/58 (37%), Positives = 36/58 (62%)
Frame = +3
Query: 258 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 431
RQ+EYYF NL RD FL+ ++ + G++P+ ++ F R+ LT + ++I L ST
Sbjct: 174 RQIEYYFSVENLERDFFLRGKMD-EQGFLPISLIAGFQRVQALTTNLNLILEVLKDST 230
>AK002058-1|BAA92061.1| 491|Homo sapiens protein ( Homo sapiens
cDNA FLJ11196 fis, clone PLACE1007688, weakly similar to
LA PROTEIN HOMOLOG. ).
Length = 491
Score = 44.0 bits (99), Expect = 2e-04
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 IRQVEYYFGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
+ Q+E+ F D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S
Sbjct: 97 VDQIEFCFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYS 155
>BC063479-1|AAH63479.1| 374|Homo sapiens LARP4 protein protein.
Length = 374
Score = 37.1 bits (82), Expect = 0.026
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +3
Query: 249 CDIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
C +Q+E+ F NL +D +L Q+ D ++P+ + + KLT D D+I L S
Sbjct: 122 CLKKQLEFCFSRENLSKDLYLISQMDSDQ-FIPIWTVANMEEIKKLTTDPDLILEVLRSS 180
>BC022377-1|AAH22377.1| 188|Homo sapiens LARP4 protein protein.
Length = 188
Score = 37.1 bits (82), Expect = 0.026
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +3
Query: 249 CDIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
C +Q+E+ F NL +D +L Q+ D ++P+ + + KLT D D+I L S
Sbjct: 52 CLKKQLEFCFSRENLSKDLYLISQMDSDQ-FIPIWTVANMEEIKKLTTDPDLILEVLRSS 110
>AY004310-1|AAF86614.1| 375|Homo sapiens c-Mpl binding protein
protein.
Length = 375
Score = 37.1 bits (82), Expect = 0.026
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +3
Query: 249 CDIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
C +Q+E+ F NL +D +L Q+ D ++P+ + + KLT D D+I L S
Sbjct: 52 CLKKQLEFCFSRENLSKDLYLISQMDSDQ-FIPIWTVANMEEIKKLTTDPDLILEVLRSS 110
>AK125113-1|BAC86052.1| 654|Homo sapiens protein ( Homo sapiens
cDNA FLJ43123 fis, clone CTONG3003972. ).
Length = 654
Score = 37.1 bits (82), Expect = 0.026
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +3
Query: 249 CDIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
C +Q+E+ F NL +D +L Q+ D ++P+ + + KLT D D+I L S
Sbjct: 52 CLKKQLEFCFSRENLSKDLYLISQMDSDQ-FIPIWTVANMEEIKKLTTDPDLILEVLRSS 110
>L34363-1|AAA20872.1| 1298|Homo sapiens X-linked nuclear protein
protein.
Length = 1298
Score = 30.7 bits (66), Expect = 2.3
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 103 NQKVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
NQ+++ K+ R IK+ ED ++N +EE + E E+E E
Sbjct: 295 NQRIYKQKKKRR---RIKVQEDSSSENKSNSEEEEEEKEEEEEEEE 337
>AY528411-1|AAS18315.1| 1212|Homo sapiens G protein coupled receptor
158 protein.
Length = 1212
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 109 KVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDET 237
+VFS+K+SH ++ ++ ++ T QEE TENS E+
Sbjct: 807 RVFSLKKSHSTYDHVRDQTEESSSLPTESQEEET-TENSTLES 848
>AL355587-1|CAI15725.1| 1215|Homo sapiens novel protein protein.
Length = 1215
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 109 KVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDET 237
+VFS+K+SH ++ ++ ++ T QEE TENS E+
Sbjct: 810 RVFSLKKSHSTYDHVRDQTEESSSLPTESQEEET-TENSTLES 851
>AL161654-1|CAI16106.1| 1215|Homo sapiens novel protein protein.
Length = 1215
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 109 KVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDET 237
+VFS+K+SH ++ ++ ++ T QEE TENS E+
Sbjct: 810 RVFSLKKSHSTYDHVRDQTEESSSLPTESQEEET-TENSTLES 851
>AL139821-1|CAI16833.1| 1215|Homo sapiens novel protein protein.
Length = 1215
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 109 KVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDET 237
+VFS+K+SH ++ ++ ++ T QEE TENS E+
Sbjct: 810 RVFSLKKSHSTYDHVRDQTEESSSLPTESQEEET-TENSTLES 851
>AB032962-1|BAA86450.2| 596|Homo sapiens KIAA1136 protein protein.
Length = 596
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 109 KVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDET 237
+VFS+K+SH ++ ++ ++ T QEE TENS E+
Sbjct: 191 RVFSLKKSHSTYDHVRDQTEESSSLPTESQEEET-TENSTLES 232
>D86971-1|BAA13207.2| 751|Homo sapiens KIAA0217 protein.
Length = 751
Score = 29.9 bits (64), Expect = 4.0
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 258 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANAL 419
+ +E+ NL D +L Q+ D +VP+ + + + KL+ D D+I L
Sbjct: 175 KTLEFCLSRENLASDMYLISQMDSDQ-YVPITTVANLDHIKKLSTDVDLIVEVL 227
>BC131630-1|AAI31631.1| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 29.9 bits (64), Expect = 4.0
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 258 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANAL 419
+ +E+ NL D +L Q+ D +VP+ + + + KL+ D D+I L
Sbjct: 162 KTLEFCLSRENLASDMYLISQMDSDQ-YVPITTVANLDHIKKLSTDVDLIVEVL 214
>AL359878-4|CAI13663.2| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 29.9 bits (64), Expect = 4.0
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 258 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANAL 419
+ +E+ NL D +L Q+ D +VP+ + + + KL+ D D+I L
Sbjct: 162 KTLEFCLSRENLASDMYLISQMDSDQ-YVPITTVANLDHIKKLSTDVDLIVEVL 214
>AL157709-4|CAI39596.2| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 29.9 bits (64), Expect = 4.0
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 258 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANAL 419
+ +E+ NL D +L Q+ D +VP+ + + + KL+ D D+I L
Sbjct: 162 KTLEFCLSRENLASDMYLISQMDSDQ-YVPITTVANLDHIKKLSTDVDLIVEVL 214
>U68140-1|AAB70457.1| 856|Homo sapiens nuclear VCP-like protein
NVLp.2 protein.
Length = 856
Score = 29.1 bits (62), Expect = 6.9
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +1
Query: 106 QKVFSIKESHRVIPEIKMTEDKEVTVET-NGQEENAKTEN-SEDETELD 246
+KVFSI S + + + ED+ + G+E+N TE+ S+D++ ++
Sbjct: 60 EKVFSIISSEKELKNLTELEDEHLAKRARQGEEDNEYTESYSDDDSSME 108
>BC117557-1|AAI17558.1| 1098|Homo sapiens GON4L protein protein.
Length = 1098
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 106 QKVFSIKESHRVIPEIK-MTEDKEVTVETNGQEENAKTENSEDETE 240
+ V S+ E + ++ + ++ ++ E +EEN++ ENSE E E
Sbjct: 678 ESVLSVPELQETMEKLTWLASERRMSQEGESEEENSQEENSEPEEE 723
>BC005897-1|AAH05897.1| 236|Homo sapiens Unknown (protein for
IMAGE:4249184) protein.
Length = 236
Score = 29.1 bits (62), Expect = 6.9
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +1
Query: 106 QKVFSIKESHRVIPEIKMTEDKEVTVET-NGQEENAKTEN-SEDETELD 246
+KVFSI S + + + ED+ + G+E+N TE+ S+D++ ++
Sbjct: 60 EKVFSIISSEKELKNLTELEDEHLAKRARQGEEDNEYTESYSDDDSSME 108
>AY335491-1|AAR01261.1| 2241|Homo sapiens GON4L isoform C protein.
Length = 2241
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 106 QKVFSIKESHRVIPEIK-MTEDKEVTVETNGQEENAKTENSEDETE 240
+ V S+ E + ++ + ++ ++ E +EEN++ ENSE E E
Sbjct: 1482 ESVLSVPELQETMEKLTWLASERRMSQEGESEEENSQEENSEPEEE 1527
>AY335490-1|AAR01260.1| 2241|Homo sapiens GON4L isoform A protein.
Length = 2241
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 106 QKVFSIKESHRVIPEIK-MTEDKEVTVETNGQEENAKTENSEDETE 240
+ V S+ E + ++ + ++ ++ E +EEN++ ENSE E E
Sbjct: 1482 ESVLSVPELQETMEKLTWLASERRMSQEGESEEENSQEENSEPEEE 1527
>AL162734-1|CAH71640.1| 1078|Homo sapiens novel protein protein.
Length = 1078
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 106 QKVFSIKESHRVIPEIK-MTEDKEVTVETNGQEENAKTENSEDETE 240
+ V S+ E + ++ + ++ ++ E +EEN++ ENSE E E
Sbjct: 320 ESVLSVPELQETMEKLTWLASERRMSQEGESEEENSQEENSEPEEE 365
>AL139128-1|CAH69942.1| 1078|Homo sapiens novel protein protein.
Length = 1078
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 106 QKVFSIKESHRVIPEIK-MTEDKEVTVETNGQEENAKTENSEDETE 240
+ V S+ E + ++ + ++ ++ E +EEN++ ENSE E E
Sbjct: 320 ESVLSVPELQETMEKLTWLASERRMSQEGESEEENSQEENSEPEEE 365
>AB195687-1|BAF51556.1| 2240|Homo sapiens YY1AP-related protein1
protein.
Length = 2240
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 106 QKVFSIKESHRVIPEIK-MTEDKEVTVETNGQEENAKTENSEDETE 240
+ V S+ E + ++ + ++ ++ E +EEN++ ENSE E E
Sbjct: 1482 ESVLSVPELQETMEKLTWLASERRMSQEGESEEENSQEENSEPEEE 1527
>AB046826-1|BAB13432.1| 1095|Homo sapiens KIAA1606 protein protein.
Length = 1095
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 106 QKVFSIKESHRVIPEIK-MTEDKEVTVETNGQEENAKTENSEDETE 240
+ V S+ E + ++ + ++ ++ E +EEN++ ENSE E E
Sbjct: 337 ESVLSVPELQETMEKLTWLASERRMSQEGESEEENSQEENSEPEEE 382
>Z84487-2|CAI42674.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 103 NQKVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
NQ+ + K+ R IK+ ED ++N +EE + E E+E E
Sbjct: 1415 NQRSYKQKKKRR---RIKVQEDSSSENKSNSEEEEEEKEEEEEEEE 1457
>Z84487-1|CAI42675.1| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 103 NQKVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
NQ+ + K+ R IK+ ED ++N +EE + E E+E E
Sbjct: 1377 NQRSYKQKKKRR---RIKVQEDSSSENKSNSEEEEEEKEEEEEEEE 1419
>U97103-1|AAC51657.1| 2375|Homo sapiens X-linked nuclear protein
protein.
Length = 2375
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 103 NQKVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
NQ+ + K+ R IK+ ED ++N +EE + E E+E E
Sbjct: 1298 NQRSYKQKKKRR---RIKVQEDSSSENKSNSEEEEEEKEEEEEEEE 1340
>U75653-1|AAC51655.1| 2492|Homo sapiens zinc finger helicase protein.
Length = 2492
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 103 NQKVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
NQ+ + K+ R IK+ ED ++N +EE + E E+E E
Sbjct: 1415 NQRSYKQKKKRR---RIKVQEDSSSENKSNSEEEEEEKEEEEEEEE 1457
>U72938-1|AAB49971.2| 2454|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2454
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 103 NQKVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
NQ+ + K+ R IK+ ED ++N +EE + E E+E E
Sbjct: 1377 NQRSYKQKKKRR---RIKVQEDSSSENKSNSEEEEEEKEEEEEEEE 1419
>U72937-1|AAB49970.2| 2492|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2492
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 103 NQKVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
NQ+ + K+ R IK+ ED ++N +EE + E E+E E
Sbjct: 1415 NQRSYKQKKKRR---RIKVQEDSSSENKSNSEEEEEEKEEEEEEEE 1457
>U72936-1|AAB49969.1| 2288|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2288
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 103 NQKVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
NQ+ + K+ R IK+ ED ++N +EE + E E+E E
Sbjct: 1211 NQRSYKQKKKRR---RIKVQEDSSSENKSNSEEEEEEKEEEEEEEE 1253
>U72935-3|AAB40700.1| 2288|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2288
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 103 NQKVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
NQ+ + K+ R IK+ ED ++N +EE + E E+E E
Sbjct: 1211 NQRSYKQKKKRR---RIKVQEDSSSENKSNSEEEEEEKEEEEEEEE 1253
>U72935-2|AAB40699.1| 2337|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2337
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 103 NQKVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
NQ+ + K+ R IK+ ED ++N +EE + E E+E E
Sbjct: 1260 NQRSYKQKKKRR---RIKVQEDSSSENKSNSEEEEEEKEEEEEEEE 1302
>U72935-1|AAB40698.1| 2375|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2375
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 103 NQKVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
NQ+ + K+ R IK+ ED ++N +EE + E E+E E
Sbjct: 1298 NQRSYKQKKKRR---RIKVQEDSSSENKSNSEEEEEEKEEEEEEEE 1340
>U09820-1|AAC50069.1| 1641|Homo sapiens helicase II protein.
Length = 1641
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 103 NQKVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
NQ+ + K+ R IK+ ED ++N +EE + E E+E E
Sbjct: 556 NQRSYKQKKKRR---RIKVQEDSSSENKSNSEEEEEEKEEEEEEEE 598
>EF467914-1|ABO43036.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked protein.
Length = 2492
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 103 NQKVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
NQ+ + K+ R IK+ ED ++N +EE + E E+E E
Sbjct: 1415 NQRSYKQKKKRR---RIKVQEDSSSENKSNSEEEEEEKEEEEEEEE 1457
>AL121874-2|CAI40710.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 103 NQKVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
NQ+ + K+ R IK+ ED ++N +EE + E E+E E
Sbjct: 1415 NQRSYKQKKKRR---RIKVQEDSSSENKSNSEEEEEEKEEEEEEEE 1457
>AL121874-1|CAB90351.2| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 103 NQKVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
NQ+ + K+ R IK+ ED ++N +EE + E E+E E
Sbjct: 1377 NQRSYKQKKKRR---RIKVQEDSSSENKSNSEEEEEEKEEEEEEEE 1419
>AL109753-2|CAI43115.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 103 NQKVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
NQ+ + K+ R IK+ ED ++N +EE + E E+E E
Sbjct: 1415 NQRSYKQKKKRR---RIKVQEDSSSENKSNSEEEEEEKEEEEEEEE 1457
>AL109753-1|CAI43116.1| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 103 NQKVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
NQ+ + K+ R IK+ ED ++N +EE + E E+E E
Sbjct: 1377 NQRSYKQKKKRR---RIKVQEDSSSENKSNSEEEEEEKEEEEEEEE 1419
>AB209545-1|BAD92782.1| 1224|Homo sapiens transcriptional regulator
ATRX isoform 1 variant protein.
Length = 1224
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 103 NQKVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
NQ+ + K+ R IK+ ED ++N +EE + E E+E E
Sbjct: 712 NQRSYKQKKKRR---RIKVQEDSSSENKSNSEEEEEEKEEEEEEEE 754
>AB102641-1|BAC81110.1| 2492|Homo sapiens ATRX protein.
Length = 2492
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 103 NQKVFSIKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
NQ+ + K+ R IK+ ED ++N +EE + E E+E E
Sbjct: 1415 NQRSYKQKKKRR---RIKVQEDSSSENKSNSEEEEEEKEEEEEEEE 1457
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,572,056
Number of Sequences: 237096
Number of extensions: 959677
Number of successful extensions: 3914
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 3475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3830
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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