Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30308X
(436 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U07652-1|AAA20518.1| 390|Drosophila melanogaster La/SS-B protein. 83 2e-16
L32988-1|AAA21776.1| 390|Drosophila melanogaster La ribonucleop... 83 2e-16
AY075257-1|AAL68124.1| 390|Drosophila melanogaster AT22034p pro... 83 2e-16
AE014134-3230|AAN11073.1| 390|Drosophila melanogaster CG10922-P... 83 2e-16
AE014134-3229|AAF53885.1| 390|Drosophila melanogaster CG10922-P... 83 2e-16
AY061107-1|AAL28655.1| 595|Drosophila melanogaster LD09531p pro... 60 1e-09
AF219009-1|AAF27644.1| 595|Drosophila melanogaster multi-sex-co... 60 1e-09
AE014298-1312|AAF46473.1| 595|Drosophila melanogaster CG12058-P... 60 1e-09
AY113653-1|AAM29658.1| 269|Drosophila melanogaster SD18087p pro... 49 3e-06
AF221108-1|AAF35862.1| 1403|Drosophila melanogaster La related p... 49 3e-06
AE014297-4227|AAN14139.1| 965|Drosophila melanogaster CG14066-P... 49 3e-06
AE014297-4226|AAF56783.3| 965|Drosophila melanogaster CG14066-P... 49 3e-06
AE014297-4225|AAN14138.4| 1403|Drosophila melanogaster CG14066-P... 49 3e-06
BT010118-1|AAQ22587.1| 961|Drosophila melanogaster AT27581p pro... 45 4e-05
AE014296-611|AAS64955.1| 958|Drosophila melanogaster CG11505-PC... 45 4e-05
AE014296-610|AAF47745.1| 1521|Drosophila melanogaster CG11505-PA... 45 4e-05
AE014296-609|AAG22237.2| 1531|Drosophila melanogaster CG11505-PB... 45 4e-05
BT021348-1|AAX33496.1| 867|Drosophila melanogaster LP19379p pro... 40 0.001
AE013599-1894|AAF58246.1| 867|Drosophila melanogaster CG17386-P... 40 0.001
BT010312-1|AAQ23630.1| 1482|Drosophila melanogaster AT29286p pro... 29 2.1
AY119466-1|AAM50120.1| 1132|Drosophila melanogaster GH03957p pro... 29 2.1
AE013599-2418|AAS64828.1| 1402|Drosophila melanogaster CG30460-P... 29 2.1
AE013599-2417|AAS64827.1| 1520|Drosophila melanogaster CG30460-P... 29 2.1
AE013599-2416|AAS64826.1| 1132|Drosophila melanogaster CG30460-P... 29 2.1
AE013599-2415|AAF57906.3| 1868|Drosophila melanogaster CG30460-P... 29 2.1
X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein pr... 28 6.3
AY095065-1|AAM11393.1| 257|Drosophila melanogaster RE08418p pro... 28 6.3
AE014298-1049|AAN09213.1| 257|Drosophila melanogaster CG11387-P... 28 6.3
AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-P... 28 6.3
BT029111-1|ABJ17044.1| 935|Drosophila melanogaster IP14884p pro... 27 8.3
>U07652-1|AAA20518.1| 390|Drosophila melanogaster La/SS-B protein.
Length = 390
Score = 82.6 bits (195), Expect = 2e-16
Identities = 40/59 (67%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 IRQVEYYFGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
IRQVEYYFGD NL+RDKFL+EQI K +DGWVPL +L F RLA L+ D I ALNKS
Sbjct: 55 IRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKS 113
>L32988-1|AAA21776.1| 390|Drosophila melanogaster La
ribonucleoprotein protein.
Length = 390
Score = 82.6 bits (195), Expect = 2e-16
Identities = 40/59 (67%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 IRQVEYYFGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
IRQVEYYFGD NL+RDKFL+EQI K +DGWVPL +L F RLA L+ D I ALNKS
Sbjct: 55 IRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKS 113
>AY075257-1|AAL68124.1| 390|Drosophila melanogaster AT22034p
protein.
Length = 390
Score = 82.6 bits (195), Expect = 2e-16
Identities = 40/59 (67%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 IRQVEYYFGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
IRQVEYYFGD NL+RDKFL+EQI K +DGWVPL +L F RLA L+ D I ALNKS
Sbjct: 55 IRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKS 113
>AE014134-3230|AAN11073.1| 390|Drosophila melanogaster CG10922-PB,
isoform B protein.
Length = 390
Score = 82.6 bits (195), Expect = 2e-16
Identities = 40/59 (67%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 IRQVEYYFGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
IRQVEYYFGD NL+RDKFL+EQI K +DGWVPL +L F RLA L+ D I ALNKS
Sbjct: 55 IRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKS 113
>AE014134-3229|AAF53885.1| 390|Drosophila melanogaster CG10922-PA,
isoform A protein.
Length = 390
Score = 82.6 bits (195), Expect = 2e-16
Identities = 40/59 (67%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 IRQVEYYFGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
IRQVEYYFGD NL+RDKFL+EQI K +DGWVPL +L F RLA L+ D I ALNKS
Sbjct: 55 IRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKS 113
>AY061107-1|AAL28655.1| 595|Drosophila melanogaster LD09531p
protein.
Length = 595
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/56 (48%), Positives = 39/56 (69%)
Frame = +3
Query: 261 QVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
Q+E+YFGD NL +D+FL+ ++ D +VPLEI FN++ LT+D IA AL+ S
Sbjct: 66 QMEFYFGDANLSKDRFLRRYVE-QDPYVPLEIFLTFNKIKTLTQDVQQIAKALSNS 120
>AF219009-1|AAF27644.1| 595|Drosophila melanogaster multi-sex-combs
protein.
Length = 595
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/56 (48%), Positives = 39/56 (69%)
Frame = +3
Query: 261 QVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
Q+E+YFGD NL +D+FL+ ++ D +VPLEI FN++ LT+D IA AL+ S
Sbjct: 66 QMEFYFGDANLSKDRFLRRYVE-QDPYVPLEIFLTFNKIKTLTQDVQQIAKALSNS 120
>AE014298-1312|AAF46473.1| 595|Drosophila melanogaster CG12058-PA
protein.
Length = 595
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/56 (48%), Positives = 39/56 (69%)
Frame = +3
Query: 261 QVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
Q+E+YFGD NL +D+FL+ ++ D +VPLEI FN++ LT+D IA AL+ S
Sbjct: 66 QMEFYFGDANLSKDRFLRRYVE-QDPYVPLEIFLTFNKIKTLTQDVQQIAKALSNS 120
>AY113653-1|AAM29658.1| 269|Drosophila melanogaster SD18087p
protein.
Length = 269
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +3
Query: 258 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
+QVEYYF NL D FL+ ++ +G++P+ ++ F+R+ LT D VI NA+ +S
Sbjct: 27 KQVEYYFSVDNLTGDFFLRRKMD-PEGYIPVTLIASFHRVLALTTDVAVIVNAIKES 82
>AF221108-1|AAF35862.1| 1403|Drosophila melanogaster La related
protein protein.
Length = 1403
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +3
Query: 258 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
+QVEYYF NL D FL+ ++ +G++P+ ++ F+R+ LT D VI NA+ +S
Sbjct: 465 KQVEYYFSVDNLTGDFFLRRKMD-PEGYIPVTLIASFHRVLALTTDVAVIVNAIKES 520
>AE014297-4227|AAN14139.1| 965|Drosophila melanogaster CG14066-PB,
isoform B protein.
Length = 965
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +3
Query: 258 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
+QVEYYF NL D FL+ ++ +G++P+ ++ F+R+ LT D VI NA+ +S
Sbjct: 27 KQVEYYFSVDNLTGDFFLRRKMD-PEGYIPVTLIASFHRVLALTTDVAVIVNAIKES 82
>AE014297-4226|AAF56783.3| 965|Drosophila melanogaster CG14066-PA,
isoform A protein.
Length = 965
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +3
Query: 258 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
+QVEYYF NL D FL+ ++ +G++P+ ++ F+R+ LT D VI NA+ +S
Sbjct: 27 KQVEYYFSVDNLTGDFFLRRKMD-PEGYIPVTLIASFHRVLALTTDVAVIVNAIKES 82
>AE014297-4225|AAN14138.4| 1403|Drosophila melanogaster CG14066-PC,
isoform C protein.
Length = 1403
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +3
Query: 258 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
+QVEYYF NL D FL+ ++ +G++P+ ++ F+R+ LT D VI NA+ +S
Sbjct: 465 KQVEYYFSVDNLTGDFFLRRKMD-PEGYIPVTLIASFHRVLALTTDVAVIVNAIKES 520
>BT010118-1|AAQ22587.1| 961|Drosophila melanogaster AT27581p
protein.
Length = 961
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +3
Query: 261 QVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
Q+EYYF NL D +L Q+ D +VP+ + +FN + KLT D ++I L +S
Sbjct: 268 QLEYYFSRENLANDTYLLSQMDSDQ-YVPIYTVARFNLVRKLTNDINLITEVLRES 322
>AE014296-611|AAS64955.1| 958|Drosophila melanogaster CG11505-PC,
isoform C protein.
Length = 958
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +3
Query: 261 QVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
Q+EYYF NL D +L Q+ D +VP+ + +FN + KLT D ++I L +S
Sbjct: 265 QLEYYFSRENLANDTYLLSQMDSDQ-YVPIYTVARFNLVRKLTNDINLITEVLRES 319
>AE014296-610|AAF47745.1| 1521|Drosophila melanogaster CG11505-PA,
isoform A protein.
Length = 1521
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +3
Query: 261 QVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
Q+EYYF NL D +L Q+ D +VP+ + +FN + KLT D ++I L +S
Sbjct: 265 QLEYYFSRENLANDTYLLSQMDSDQ-YVPIYTVARFNLVRKLTNDINLITEVLRES 319
>AE014296-609|AAG22237.2| 1531|Drosophila melanogaster CG11505-PB,
isoform B protein.
Length = 1531
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +3
Query: 261 QVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 428
Q+EYYF NL D +L Q+ D +VP+ + +FN + KLT D ++I L +S
Sbjct: 275 QLEYYFSRENLANDTYLLSQMDSDQ-YVPIYTVARFNLVRKLTNDINLITEVLRES 329
>BT021348-1|AAX33496.1| 867|Drosophila melanogaster LP19379p
protein.
Length = 867
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/57 (28%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +3
Query: 264 VEYYFGDVNLHRDKFLQEQIKLD-DGWVPLEILTKFNRLAKLTEDTDVIANALNKST 431
VE+YF + ++ +D FL + ++ + +G+V L++++ F R+ +LT + V+ +A+ + +
Sbjct: 289 VEFYFSNESILKDAFLLKHVRRNKEGFVSLKLVSSFKRVRQLTREWKVVGDAVRRKS 345
>AE013599-1894|AAF58246.1| 867|Drosophila melanogaster CG17386-PA
protein.
Length = 867
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/57 (28%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +3
Query: 264 VEYYFGDVNLHRDKFLQEQIKLD-DGWVPLEILTKFNRLAKLTEDTDVIANALNKST 431
VE+YF + ++ +D FL + ++ + +G+V L++++ F R+ +LT + V+ +A+ + +
Sbjct: 289 VEFYFSNESILKDAFLLKHVRRNKEGFVSLKLVSSFKRVRQLTREWKVVGDAVRRKS 345
>BT010312-1|AAQ23630.1| 1482|Drosophila melanogaster AT29286p protein.
Length = 1482
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 121 IKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
IK++H + KM EDK ++N +++ E S ETE
Sbjct: 1022 IKDNHAHRSDSKMPEDKLQRQQSNASNASSQEEKSRQETE 1061
>AY119466-1|AAM50120.1| 1132|Drosophila melanogaster GH03957p
protein.
Length = 1132
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 121 IKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
IK++H + KM EDK ++N +++ E S ETE
Sbjct: 672 IKDNHAHRSDSKMPEDKLQRQQSNASNASSQEEKSRQETE 711
>AE013599-2418|AAS64828.1| 1402|Drosophila melanogaster CG30460-PD,
isoform D protein.
Length = 1402
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 121 IKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
IK++H + KM EDK ++N +++ E S ETE
Sbjct: 942 IKDNHAHRSDSKMPEDKLQRQQSNASNASSQEEKSRQETE 981
>AE013599-2417|AAS64827.1| 1520|Drosophila melanogaster CG30460-PA,
isoform A protein.
Length = 1520
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 121 IKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
IK++H + KM EDK ++N +++ E S ETE
Sbjct: 1060 IKDNHAHRSDSKMPEDKLQRQQSNASNASSQEEKSRQETE 1099
>AE013599-2416|AAS64826.1| 1132|Drosophila melanogaster CG30460-PB,
isoform B protein.
Length = 1132
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 121 IKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
IK++H + KM EDK ++N +++ E S ETE
Sbjct: 672 IKDNHAHRSDSKMPEDKLQRQQSNASNASSQEEKSRQETE 711
>AE013599-2415|AAF57906.3| 1868|Drosophila melanogaster CG30460-PC,
isoform C protein.
Length = 1868
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 121 IKESHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDETE 240
IK++H + KM EDK ++N +++ E S ETE
Sbjct: 1408 IKDNHAHRSDSKMPEDKLQRQQSNASNASSQEEKSRQETE 1447
>X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein
protein.
Length = 2175
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 163 EDKEVTVETNGQEENAKTENSEDETELD 246
ED+E + + +EENA +++ D+ ELD
Sbjct: 280 EDEEEDEDEDDEEENASMQSNADDMELD 307
>AY095065-1|AAM11393.1| 257|Drosophila melanogaster RE08418p
protein.
Length = 257
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 163 EDKEVTVETNGQEENAKTENSEDETELD 246
ED+E + + +EENA +++ D+ ELD
Sbjct: 92 EDEEEDEDEDDEEENASMQSNADDMELD 119
>AE014298-1049|AAN09213.1| 257|Drosophila melanogaster CG11387-PB,
isoform B protein.
Length = 257
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 163 EDKEVTVETNGQEENAKTENSEDETELD 246
ED+E + + +EENA +++ D+ ELD
Sbjct: 92 EDEEEDEDEDDEEENASMQSNADDMELD 119
>AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-PA,
isoform A protein.
Length = 2175
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 163 EDKEVTVETNGQEENAKTENSEDETELD 246
ED+E + + +EENA +++ D+ ELD
Sbjct: 280 EDEEEDEDEDDEEENASMQSNADDMELD 307
>BT029111-1|ABJ17044.1| 935|Drosophila melanogaster IP14884p
protein.
Length = 935
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 142 IPEIKMTEDKEVTVETNGQEENAKTENSEDETELDIA 252
I EI + E ++ T+E + E+N ++ ++E +DIA
Sbjct: 695 ISEISLIEVEDTTIEASTCEQNLESCKLQEEKSVDIA 731
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,893,606
Number of Sequences: 53049
Number of extensions: 317862
Number of successful extensions: 1553
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1448
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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