Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30308X
         (436 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    25   0.37 
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    23   2.0  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    23   2.0  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              22   2.6  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   7.9  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 25.0 bits (52), Expect = 0.37
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 145 PEIKMTEDKEVTVETNGQEENAKTENSEDE 234
           PEI+++++   +V T   +EN KTE   DE
Sbjct: 298 PEIEISQN---SVSTGSDKENHKTEEPNDE 324


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 126 FNGKYLLISENKFIEASKL 70
           F GK+  +S+N F E +K+
Sbjct: 2   FEGKFQFVSQNNFEEFAKV 20


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 126 FNGKYLLISENKFIEASKL 70
           F GK+  +S+N F E +K+
Sbjct: 4   FEGKFQFVSQNNFEEFAKV 22


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +3

Query: 249 CDIRQVEYYFGDVNLHRDKFLQEQIKLD 332
           C +++V +   D   + +KF +   KLD
Sbjct: 65  CMLKKVGFVNADTTFNEEKFRERTTKLD 92


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 401 ICVLCQFGKAIEFCEN 354
           IC+L     A++FC N
Sbjct: 158 ICILKSITCALQFCHN 173


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,388
Number of Sequences: 438
Number of extensions: 2045
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)