Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30304
         (809 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    25   0.94 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   1.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   1.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.2  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   6.6  

>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +3

Query: 315 PVPL--KYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYEGPQMY 449
           PVP+  + LN+ + +    YT+     P GC+VV+GT+  +   + Y
Sbjct: 61  PVPIIARQLNQDLKLASGDYTV-----PAGCTVVIGTFKVHRLEEYY 102


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 659  TKGRHELVPRELATEAENQAKQALADIEDSDEGEIEHD 772
            TK + EL P  L  +   +  + L  ++  D+G+ E+D
Sbjct: 1367 TKKKEELSPNALLDKQAVEIVKQLQKLQGIDDGDYEND 1404



 Score = 22.6 bits (46), Expect = 3.8
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +2

Query: 437 PSDVYARSQWCIFFIFWL 490
           PS       WC+ F FW+
Sbjct: 124 PSAERVAWMWCLIFAFWV 141


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 659  TKGRHELVPRELATEAENQAKQALADIEDSDEGEIEHD 772
            TK + EL P  L  +   +  + L  ++  D+G+ E+D
Sbjct: 1367 TKKKEELSPNALLDKQAVEIVKQLQKLQGIDDGDYEND 1404



 Score = 22.6 bits (46), Expect = 3.8
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +2

Query: 437 PSDVYARSQWCIFFIFWL 490
           PS       WC+ F FW+
Sbjct: 124 PSAERVAWMWCLIFAFWV 141


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 659  TKGRHELVPRELATEAENQAKQALADIEDSDEGEIEHD 772
            TK + EL P  L  +   +  + L  ++  D+G+ E+D
Sbjct: 1367 TKKKEELSPNALLDKQAVEIVKQLQKLQGIDDGDYEND 1404



 Score = 22.6 bits (46), Expect = 3.8
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +2

Query: 437 PSDVYARSQWCIFFIFWL 490
           PS       WC+ F FW+
Sbjct: 124 PSAERVAWMWCLIFAFWV 141


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 659  TKGRHELVPRELATEAENQAKQALADIEDSDEGEIEHD 772
            TK + EL P  L  +   +  + L  ++  D+G+ E+D
Sbjct: 1367 TKKKEELSPNALLDKQAVEIVKQLQKLQGIDDGDYEND 1404



 Score = 22.6 bits (46), Expect = 3.8
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +2

Query: 437 PSDVYARSQWCIFFIFWL 490
           PS       WC+ F FW+
Sbjct: 124 PSAERVAWMWCLIFAFWV 141


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -2

Query: 805 FHFIRNLILRLIMFNLSFI*IFNISKSLFSLVLCFGGELTRNQLMAT 665
           F  I N+I R  + + +   +FN+ K L  +V    G      LM T
Sbjct: 116 FEMINNIITRGDVTSTTIKKLFNLHKILVKVVREINGIFAFQVLMCT 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,632
Number of Sequences: 336
Number of extensions: 4137
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)