Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30304
(809 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783... 122 3e-28
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653... 113 2e-25
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852... 99 2e-21
06_01_0539 + 3869156-3869908 81 8e-16
06_01_0529 + 3831100-3831852 81 8e-16
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 80 2e-15
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 79 3e-15
03_01_0568 - 4192514-4192606,4192694-4192753,4192837-4192932,419... 76 3e-14
06_01_0479 + 3419657-3420337 62 7e-10
03_03_0187 + 15253000-15253207,15253281-15253370,15254338-152544... 60 2e-09
02_05_0057 + 25472872-25472912,25473012-25473157,25474008-254740... 60 2e-09
02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856 41 0.001
07_03_1256 - 25237465-25237590,25237833-25237918,25238025-252380... 41 0.001
06_03_0903 - 25816395-25816493,25816695-25816779,25817390-258174... 33 0.27
02_01_0614 - 4599035-4599083,4599209-4599303,4599410-4599494,460... 33 0.27
07_03_1541 + 27575006-27575089,27575361-27575460,27575643-275757... 30 1.9
01_07_0124 + 41212728-41212922,41215156-41215210,41215336-412171... 30 1.9
09_04_0695 - 19547101-19548010,19548089-19548587,19549461-195497... 30 2.5
06_01_1007 + 7846266-7846526,7848368-7848420,7849231-7849432,784... 30 2.5
02_05_0902 + 32620668-32621209,32621847-32622258,32622471-326226... 29 3.3
01_06_0513 - 29944888-29945943 29 3.3
01_01_0689 - 5287110-5287209,5287444-5287691,5287935-5288107,528... 29 3.3
06_02_0303 + 14022428-14022652,14023247-14024159,14024310-140247... 29 5.8
10_01_0108 + 1337009-1338190 28 7.6
01_06_1742 - 39585879-39585994,39586089-39586238,39586288-395863... 28 7.6
>05_05_0306 -
23977543-23977614,23977709-23977799,23978296-23978361,
23978399-23978479,23979130-23979176,23979408-23979492,
23979570-23979656,23979728-23979801,23980083-23980166,
23980259-23980298,23980386-23980489
Length = 276
Score = 122 bits (295), Expect = 3e-28
Identities = 55/88 (62%), Positives = 71/88 (80%)
Frame = +1
Query: 1 MSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYE 180
MSSIGTGYDLS + FSPDGRVFQVEYA KAV+NSGTV+G++ KDG+V VEKL+TSK+
Sbjct: 1 MSSIGTGYDLSVTTFSPDGRVFQVEYAGKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMIL 60
Query: 181 PGANKRIFHIDEHVGMAVAGLISDADKL 264
G+N+R+ + H G+AVAGL +D ++
Sbjct: 61 KGSNRRLHSVHRHSGLAVAGLAADGRQI 88
Score = 105 bits (252), Expect = 4e-23
Identities = 45/89 (50%), Positives = 66/89 (74%)
Frame = +3
Query: 255 RQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYE 434
RQIV A+SEA++Y YG P+P+K L +RV+ Y+H TLY +RP+GC V++G + D +
Sbjct: 86 RQIVSRAKSEAASYEKVYGEPMPVKELADRVASYVHLCTLYWWLRPFGCGVILGGY-DRD 144
Query: 435 GPQMYMLDPSGVSFSYFGCAVGKANRQQK 521
GPQ+YM++PSG+S+ YFG A+GK + K
Sbjct: 145 GPQLYMIEPSGLSYKYFGAALGKGRQAAK 173
Score = 81.8 bits (193), Expect = 6e-16
Identities = 39/73 (53%), Positives = 53/73 (72%)
Frame = +2
Query: 524 EIEKLKLGDLTVKELVREAARIIYLVHDELKDKQFELELSWVSKDTKGRHELVPRELATE 703
EIEKL L +LT +E + E A+IIY VHDE KDK FELELSWV ++K +HE VP +L +
Sbjct: 202 EIEKLNLSELTCREGIVEVAKIIYGVHDEAKDKDFELELSWVCDESKRQHEKVPDDLVEQ 261
Query: 704 AENQAKQALADIE 742
A+ A+ AL +++
Sbjct: 262 AKAAAQAALEEMD 274
>01_06_1091 +
34464923-34465026,34465124-34465163,34465245-34465328,
34465457-34465480,34465582-34465655,34465726-34465812,
34465922-34466006,34466215-34466261,34467048-34467113,
34468307-34468397,34468477-34468548
Length = 257
Score = 113 bits (272), Expect = 2e-25
Identities = 57/96 (59%), Positives = 71/96 (73%), Gaps = 8/96 (8%)
Frame = +1
Query: 1 MSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYE 180
MSSIGTGYDLS + FSPDGRVFQVEYA KAV+NSGTV+G++ KDG+V VEKL+TSK+
Sbjct: 1 MSSIGTGYDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMML 60
Query: 181 PGANKRIFHIDEHVG--------MAVAGLISDADKL 264
G+N+RI + H G MAVAGL +D ++
Sbjct: 61 EGSNRRIHSVHWHSGLDIILINVMAVAGLAADGRQI 96
Score = 104 bits (249), Expect = 1e-22
Identities = 45/89 (50%), Positives = 65/89 (73%)
Frame = +3
Query: 255 RQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYE 434
RQIV A+SEA++Y YG P+ +K L +RV+ Y+H TLY +RP+GC V++G + D +
Sbjct: 94 RQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYWWLRPFGCGVILGGY-DRD 152
Query: 435 GPQMYMLDPSGVSFSYFGCAVGKANRQQK 521
GPQ+YM++PSGVS+ YFG A+GK + K
Sbjct: 153 GPQLYMIEPSGVSYKYFGAALGKGRQAAK 181
Score = 91.1 bits (216), Expect = 1e-18
Identities = 43/81 (53%), Positives = 60/81 (74%)
Frame = +2
Query: 500 KSQQAAKTEIEKLKLGDLTVKELVREAARIIYLVHDELKDKQFELELSWVSKDTKGRHEL 679
K +QAAKTEIEKLKL +LT +E + E A+IIY VHDE KDK FELELSW+ ++ +H+
Sbjct: 175 KGRQAAKTEIEKLKLSELTCREGIVEVAKIIYGVHDEAKDKAFELELSWICDESNRQHQK 234
Query: 680 VPRELATEAENQAKQALADIE 742
VP +L +A+ A+ AL +++
Sbjct: 235 VPADLLEQAKVAAQAALEEMD 255
>11_06_0394 -
23084485-23084577,23084677-23084802,23085134-23085236,
23085895-23085953,23086418-23086519,23086601-23086714,
23087666-23087746,23088073-23088154,23088504-23088556
Length = 270
Score = 99 bits (238), Expect = 2e-21
Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 3/95 (3%)
Frame = +1
Query: 16 TGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANK 195
T YD + FSP+GR+FQVEYA +A++ T IGL+ KDGVV AVEK +TS L EP + +
Sbjct: 19 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPSSVE 78
Query: 196 RIFHIDEHVGMAVAGLISDADKL---SRLLVQRHQ 291
+I IDEH+G A++GLI+DA L +R+ Q H+
Sbjct: 79 KIMEIDEHIGCAMSGLIADARTLVEHARVETQNHR 113
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 RQIVETARSEASNYRSQYGSPVPLKYLNERV---SMYMHAYTLYSAVRPYGCSVVMGTWT 425
R +VE AR E N+R YG P+ ++ + + ++ S RP+G S+++
Sbjct: 99 RTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLI-AGH 157
Query: 426 DYEGPQMYMLDPSGVSFSYFGCAVGKAN 509
D GP +Y DPSG + A+G +
Sbjct: 158 DENGPSLYYTDPSGTFWQCNAKAIGSGS 185
>06_01_0539 + 3869156-3869908
Length = 250
Score = 81.4 bits (192), Expect = 8e-16
Identities = 41/93 (44%), Positives = 64/93 (68%), Gaps = 4/93 (4%)
Frame = +1
Query: 22 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGAN-KR 198
YD + FSP+GR++QVEYA +A+ N+G+ +G+ DGVV EK +TSKL + + ++
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEK 64
Query: 199 IFHIDEHVGMAVAGLISDADKL---SRLLVQRH 288
++ ID H+ AVAG++SDA+ L +RL QR+
Sbjct: 65 MYKIDSHLACAVAGIMSDANILLNTARLHAQRY 97
Score = 61.7 bits (143), Expect = 7e-10
Identities = 31/88 (35%), Positives = 45/88 (51%)
Frame = +3
Query: 261 IVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYEGP 440
++ TAR A Y Y P+P++ L + + YT + +RP+G S + W + G
Sbjct: 86 LLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGF 145
Query: 441 QMYMLDPSGVSFSYFGCAVGKANRQQKQ 524
Q+YM DPSG + AVG AN Q Q
Sbjct: 146 QLYMSDPSGNYSGWKAAAVG-ANSQAAQ 172
>06_01_0529 + 3831100-3831852
Length = 250
Score = 81.4 bits (192), Expect = 8e-16
Identities = 41/93 (44%), Positives = 64/93 (68%), Gaps = 4/93 (4%)
Frame = +1
Query: 22 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGAN-KR 198
YD + FSP+GR++QVEYA +A+ N+G+ +G+ DGVV EK +TSKL + + ++
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEK 64
Query: 199 IFHIDEHVGMAVAGLISDADKL---SRLLVQRH 288
++ ID H+ AVAG++SDA+ L +RL QR+
Sbjct: 65 MYKIDSHLACAVAGIMSDANILLNTARLHAQRY 97
Score = 61.7 bits (143), Expect = 7e-10
Identities = 31/88 (35%), Positives = 45/88 (51%)
Frame = +3
Query: 261 IVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYEGP 440
++ TAR A Y Y P+P++ L + + YT + +RP+G S + W + G
Sbjct: 86 LLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGF 145
Query: 441 QMYMLDPSGVSFSYFGCAVGKANRQQKQ 524
Q+YM DPSG + AVG AN Q Q
Sbjct: 146 QLYMSDPSGNYSGWKAAAVG-ANSQAAQ 172
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 80.2 bits (189), Expect = 2e-15
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 4/104 (3%)
Frame = +1
Query: 22 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 201
YD + + FSPDG +FQVEYA +AV +G+RG D VV VEK T KL + + ++I
Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKI 63
Query: 202 FHIDEHVGMAVAGLISDADKL---SRLLVQRHQ-TTDLSMAVQY 321
+D H+ +A AGL +DA L +R+ Q H+ T + ++ V+Y
Sbjct: 64 ASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEY 107
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 79.4 bits (187), Expect = 3e-15
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
Frame = +1
Query: 22 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 201
YD + + FSPDG +FQVEYA +AV +G+RG D VV VEK T KL + + ++I
Sbjct: 74 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKI 133
Query: 202 FHIDEHVGMAVAGLISDADKL---SRLLVQRHQ-TTDLSMAVQY 321
+D H+ +A AGL +DA L +R+ Q H+ T + + V+Y
Sbjct: 134 ASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEY 177
>03_01_0568 -
4192514-4192606,4192694-4192753,4192837-4192932,
4193088-4193170,4193289-4193347,4193463-4193559,
4194151-4194232,4194353-4194447,4194585-4194660
Length = 246
Score = 76.2 bits (179), Expect = 3e-14
Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +1
Query: 13 GTGYDLSASQFSPDGRVFQVEYAAKAVENSG-TVIGLRGKDGVVFAVEKLITSKLYEPGA 189
G GYD + FSP+GR++QVEYA KAV+++G T IG+RGKD V +K + KL + +
Sbjct: 6 GAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTS 65
Query: 190 NKRIFHIDEHVGMAVAGLISDADKL 264
+F I +++G+ GL +DA L
Sbjct: 66 VTHLFPITKYIGLLATGLTADARSL 90
Score = 45.2 bits (102), Expect = 6e-05
Identities = 21/82 (25%), Positives = 45/82 (54%)
Frame = +3
Query: 255 RQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYE 434
R +V AR+EA+ +R ++G +P+ L + ++ YT ++ +RP G ++ + + +
Sbjct: 88 RSLVYQARNEAAEFRFKWGYEMPVDVLAKWIADKAQVYTQHAYMRPLGVVAMVLGYDEEK 147
Query: 435 GPQMYMLDPSGVSFSYFGCAVG 500
Q++ DP+G F + + G
Sbjct: 148 NAQLFKCDPAGHFFGHKATSAG 169
>06_01_0479 + 3419657-3420337
Length = 226
Score = 61.7 bits (143), Expect = 7e-10
Identities = 31/88 (35%), Positives = 45/88 (51%)
Frame = +3
Query: 261 IVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYEGP 440
++ TAR A Y Y P+P++ L + + YT + +RP+G S + W + G
Sbjct: 62 LLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGF 121
Query: 441 QMYMLDPSGVSFSYFGCAVGKANRQQKQ 524
Q+YM DPSG + AVG AN Q Q
Sbjct: 122 QLYMSDPSGNYSGWKAAAVG-ANSQAAQ 148
Score = 54.8 bits (126), Expect = 8e-08
Identities = 29/72 (40%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Frame = +1
Query: 85 KAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGAN-KRIFHIDEHVGMAVAGLISDADK 261
+A+ N+G+ +G+ DGVV EK +TSKL + + ++++ ID H+ AVAG++SDA+
Sbjct: 2 EAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANI 61
Query: 262 L---SRLLVQRH 288
L +RL QR+
Sbjct: 62 LLNTARLHAQRY 73
>03_03_0187 +
15253000-15253207,15253281-15253370,15254338-15254402,
15254489-15254535,15255195-15255270,15255432-15255499,
15255793-15255862,15256024-15256109,15256328-15256390,
15256472-15256537,15256938-15256986
Length = 295
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/83 (34%), Positives = 45/83 (54%)
Frame = +3
Query: 255 RQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYE 434
R +V +R +A Y Y +P+ L + M +T VRP+G S+++ + D
Sbjct: 144 RVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDD-N 202
Query: 435 GPQMYMLDPSGVSFSYFGCAVGK 503
GPQ+Y +DPSG FS+ A+GK
Sbjct: 203 GPQLYQVDPSGSYFSWKASAMGK 225
>02_05_0057 +
25472872-25472912,25473012-25473157,25474008-25474072,
25474182-25474228,25474922-25474997,25475176-25475243,
25475862-25475931,25476178-25476263,25476418-25476480,
25476556-25476621,25476740-25476788
Length = 258
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/83 (34%), Positives = 45/83 (54%)
Frame = +3
Query: 255 RQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYE 434
R +V +R +A Y Y +P+ L + M +T VRP+G S+++ + D
Sbjct: 107 RVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDD-N 165
Query: 435 GPQMYMLDPSGVSFSYFGCAVGK 503
GPQ+Y +DPSG FS+ A+GK
Sbjct: 166 GPQLYQVDPSGSYFSWKASAMGK 188
Score = 35.5 bits (78), Expect = 0.050
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 22 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRG 126
Y S + FSP G++ Q+E+A AV + T +G++G
Sbjct: 6 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKG 40
>02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856
Length = 272
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +1
Query: 85 KAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRIFHIDEHVGMAVAGLISDADKL 264
+AV+ +GLR + V A S+L +++F + +H G+A+AGL +D L
Sbjct: 2 EAVKQGSACVGLRSRTHAVLAAANKAASEL--SSHQRKVFRVADHAGVALAGLTADGRVL 59
Query: 265 SRLL 276
SR L
Sbjct: 60 SRFL 63
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +3
Query: 351 MYMHAYTLYSAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVGKANRQQK 521
M + T S RPYG +++ D G +Y PSG F Y A+G ++ K
Sbjct: 116 MVLQVCTQRSWKRPYGVGLLVAG-LDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAK 171
>07_03_1256 -
25237465-25237590,25237833-25237918,25238025-25238083,
25238516-25238612,25239582-25239663,25239752-25240096
Length = 264
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +3
Query: 255 RQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYG-CSVVMGTWTDY 431
R I + AR+ A+ +R ++G + L + ++ T ++ +RPYG S++ G +
Sbjct: 146 RAIAQEARNAAAEFRFKWGYKMSPCMLAQWIADRAQIRTQHAQIRPYGVVSMIFGIDEEK 205
Query: 432 EGPQMYMLDPSGVSFSYFGCAVGKANRQ 515
P+++ DP+G F++ + G ++
Sbjct: 206 GTPELFTCDPAGQFFAHKATSAGPKEKE 233
>06_03_0903 -
25816395-25816493,25816695-25816779,25817390-25817479,
25818566-25818673,25818771-25818952,25819032-25819216,
25820812-25820971
Length = 302
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +1
Query: 97 NSGTVIGLRGKDGVVFAVEKLITSKLYEPGAN-KRIFHIDEHVGMAVAGLISDADKLSRL 273
N V+ + GK+ A ++ + +L + +R+F I + + + ++GL +DA L +
Sbjct: 120 NGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQTLYQR 179
Query: 274 LVQRHQTTDL 303
LV RH+ L
Sbjct: 180 LVFRHKLYQL 189
>02_01_0614 -
4599035-4599083,4599209-4599303,4599410-4599494,
4600107-4600196,4600772-4600879,4600983-4601197
Length = 213
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +1
Query: 97 NSGTVIGLRGKDGVVFAVEKLITSKLYEPGAN-KRIFHIDEHVGMAVAGLISDADKLSRL 273
N V+ + GK+ A ++ + +L + +R+F I + + + ++GL +DA L +
Sbjct: 16 NGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQTLYQR 75
Query: 274 LVQRHQTTDL 303
LV RH+ L
Sbjct: 76 LVFRHKLYQL 85
>07_03_1541 +
27575006-27575089,27575361-27575460,27575643-27575782,
27575948-27576163
Length = 179
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/36 (36%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +3
Query: 678 WFRVSSPPKQRTKLNRLL-LILKIQMKERLNMINLS 782
W R+SS + +TKL ++ +IL ++M ER M++++
Sbjct: 113 WMRISSLDELKTKLGHIIVMILLVKMFERSKMVHIT 148
>01_07_0124 +
41212728-41212922,41215156-41215210,41215336-41217128,
41217363-41217521,41217883-41218054,41218173-41218471,
41219060-41219368
Length = 993
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +1
Query: 223 GMAVAGLISDADKLSRLLVQRHQTTDLSMAVQYH*SI*MNEFQCTCTRTHYTVLFGHMVA 402
G+ +A +S A + +L+ +R LS M C CT T+ HMV
Sbjct: 419 GLPLAVTLSLAFAMKKLMQERALVRHLSACET------MGSASCICTDKTGTLTTNHMVV 472
Query: 403 QSLWAHG--QTM 432
+ +WA G QTM
Sbjct: 473 EKIWASGAAQTM 484
>09_04_0695 - 19547101-19548010,19548089-19548587,19549461-19549728,
19551025-19551687,19551849-19552060,19552203-19552593,
19552659-19553107,19553454-19553790
Length = 1242
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 215 NMLAWLSQGSYQMQTNCRDCSFRGIKLQIS--VWQSSTTEVFK*TSFNVHARVHTIQCCS 388
N+L W +QG+ ++ + R + L I+ +W+ +F+ VH + IQ
Sbjct: 1168 NLLDWWTQGTSDLEAT-KQKGLRTLFLLIAWEIWKERNARIFRAKEATVHQMISRIQEEL 1226
Query: 389 AIWLLSRYGHMDRL 430
W ++ H+ R+
Sbjct: 1227 GWWSMAGAKHIGRM 1240
>06_01_1007 +
7846266-7846526,7848368-7848420,7849231-7849432,
7849526-7849609,7850005-7850188,7850605-7850741,
7850875-7850939,7851093-7851762
Length = 551
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1
Query: 364 RTHYTVLFGHMVAQSLWAHG 423
R YT L GH V QS WAHG
Sbjct: 424 RLLYTELPGHSVVQSRWAHG 443
>02_05_0902 +
32620668-32621209,32621847-32622258,32622471-32622675,
32622712-32622806,32622945-32623557,32623652-32623820,
32624392-32624749,32625226-32625336,32626207-32626561,
32627262-32627484,32627837-32628058,32628628-32628781
Length = 1152
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -1
Query: 149 TANTTPSFPRRPITVPEFSTAFAAYSTWKTRPS 51
+++++ FP P++ PE S+A AA S W + PS
Sbjct: 32 SSSSSSLFPLFPLSAPEESSAPAAGSQWLSNPS 64
>01_06_0513 - 29944888-29945943
Length = 351
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Frame = +2
Query: 563 ELVREAARIIYLVHDELKD--KQFELELSWVSKDTKGRHELVPRELATEAENQAKQALAD 736
EL+ E+ R + V++ ++ +Q E+ W+ +D + E+ RE+ +A QA+ A
Sbjct: 266 ELLVESIRKLGDVYERVESSKRQHMAEVEWLRRDLQRDLEVRRREILEKA--QAEIARLT 323
Query: 737 IEDSDEGEIE 766
ED +EG+++
Sbjct: 324 EEDGEEGDLK 333
>01_01_0689 - 5287110-5287209,5287444-5287691,5287935-5288107,
5288913-5289060,5289537-5289696,5290021-5290166,
5290963-5291191,5291901-5292123,5292253-5292401,
5293501-5293670,5294188-5294259,5294363-5294443,
5296180-5296311,5296381-5296468,5296841-5297054,
5297501-5297684,5298069-5298152,5299002-5299131,
5299280-5299650,5299684-5299967,5300932-5301247
Length = 1233
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 605 DELKDKQFELELSWVSKDTKGRHELVPRELATEAENQAKQALADIEDSDEGEIE 766
DE+ + F+ ++ WVSK+ K P E +A K +D +E ++E
Sbjct: 890 DEMANSDFDGDIYWVSKNPKLLEHFKPSEPWVQAIKPKKTKQKKPQDCNESKLE 943
>06_02_0303 +
14022428-14022652,14023247-14024159,14024310-14024700,
14024949-14025206,14025284-14025394,14025486-14025564,
14025842-14026027
Length = 720
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 309 GSPVPLKYLNERVSMYMHAYT 371
G P+P++Y NER ++HA T
Sbjct: 123 GKPIPMEYHNERARNWVHART 143
>10_01_0108 + 1337009-1338190
Length = 393
Score = 28.3 bits (60), Expect = 7.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 396 GCSVVMGTWTDYEGPQMYML 455
GCS+++ TW D G ++ ML
Sbjct: 106 GCSIILDTWLDENGRRLMML 125
>01_06_1742 -
39585879-39585994,39586089-39586238,39586288-39586375,
39586479-39586640,39586753-39586877,39586992-39587030,
39587290-39587476,39587643-39587713,39589371-39589564,
39589656-39589767,39589899-39590082,39590177-39590503,
39590780-39591061,39591148-39591621,39591730-39591813,
39591850-39591939,39592024-39592247,39592503-39592600,
39592679-39593169,39593249-39593520,39594266-39594522,
39594672-39594890,39595007-39595167,39595249-39595441,
39595528-39595633,39595947-39596121,39596404-39596556,
39596663-39596794,39597120-39597184,39597754-39597819,
39598433-39598511,39598587-39598767,39598864-39598976
Length = 1889
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -3
Query: 177 IQFGCD*LLNSKYHPVFSSEANYCSRIFYSLCSIFH 70
+Q G D LLNS+ V +++ Y S Y L IFH
Sbjct: 319 LQQGIDMLLNSESGCVEAAKTGYISPKLYELIQIFH 354
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,918,912
Number of Sequences: 37544
Number of extensions: 434289
Number of successful extensions: 1384
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1377
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -