Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30304
(809 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 120 1e-27
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 83 2e-16
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 77 1e-14
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 66 2e-11
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 60 2e-09
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 33 0.32
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 33 0.32
U41552-5|AAP82646.1| 183|Caenorhabditis elegans Vema (mammalian... 29 3.0
U41552-4|AAD31555.1| 198|Caenorhabditis elegans Vema (mammalian... 29 3.0
U29378-8|ABA54423.1| 354|Caenorhabditis elegans Hypothetical pr... 29 3.0
U29378-7|AAA68722.2| 362|Caenorhabditis elegans Hypothetical pr... 29 3.0
U21322-1|AAA62542.1| 118|Caenorhabditis elegans Hypothetical pr... 29 3.9
U41540-5|AAK39229.2| 666|Caenorhabditis elegans Hypothetical pr... 28 6.9
AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral signa... 28 6.9
Z82262-2|CAB05152.1| 248|Caenorhabditis elegans Hypothetical pr... 28 9.1
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 120 bits (289), Expect = 1e-27
Identities = 55/84 (65%), Positives = 71/84 (84%)
Frame = +1
Query: 1 MSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYE 180
MSSIGTGYDL+AS FSPDGR+FQVEYA KAV+N+GT+I +RGK+GVV +KLI+SKLY
Sbjct: 1 MSSIGTGYDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYT 60
Query: 181 PGANKRIFHIDEHVGMAVAGLISD 252
AN R+F+++++VG+AVAG D
Sbjct: 61 DNANPRMFNVNDNVGVAVAGNYPD 84
Score = 87.0 bits (206), Expect = 1e-17
Identities = 44/85 (51%), Positives = 59/85 (69%)
Frame = +2
Query: 500 KSQQAAKTEIEKLKLGDLTVKELVREAARIIYLVHDELKDKQFELELSWVSKDTKGRHEL 679
K +QAAK EIEKLK+ +L V +LV+EAARII +V DE KDK ++E+ WV + T G++E
Sbjct: 167 KHRQAAKAEIEKLKIEELDVNQLVKEAARIIMVVRDENKDKNVQIEMGWVGEQTNGKYEE 226
Query: 680 VPRELATEAENQAKQALADIEDSDE 754
VP E+ T AE A L D +D D+
Sbjct: 227 VPSEVVTAAEEWAIAKL-DEDDMDD 250
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/83 (30%), Positives = 45/83 (54%)
Frame = +3
Query: 273 ARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYEGPQMYM 452
A EA + Y P+P++ + V+ Y+H +TL RP+G +W G ++++
Sbjct: 92 AYGEAMKWLKDYREPMPIQNIANSVAEYIHIHTL-GISRPFGAGAFFMSWNKQTGGRLFL 150
Query: 453 LDPSGVSFSYFGCAVGKANRQQK 521
++PSG+++ Y AVGK + K
Sbjct: 151 VEPSGLNYEYKAWAVGKHRQAAK 173
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 83.0 bits (196), Expect = 2e-16
Identities = 43/90 (47%), Positives = 60/90 (66%)
Frame = +1
Query: 22 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 201
YD + FSP+GR+FQVEYA +AV+ T IG++ +GV+ A EK TSKL A ++I
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKI 67
Query: 202 FHIDEHVGMAVAGLISDADKLSRLLVQRHQ 291
+D+H+G+ AGLI+D SR LV+R Q
Sbjct: 68 SKVDQHIGVTFAGLIAD----SRTLVERAQ 93
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 77.4 bits (182), Expect = 1e-14
Identities = 41/88 (46%), Positives = 56/88 (63%)
Frame = +1
Query: 22 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 201
YD + + FSPDG +FQVEYA +AV+ T +G+RGKD +V VEK L + ++I
Sbjct: 4 YDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKI 63
Query: 202 FHIDEHVGMAVAGLISDADKLSRLLVQR 285
ID+HV +A AGL +DA R+LV R
Sbjct: 64 HMIDDHVMLAFAGLSADA----RVLVDR 87
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/91 (26%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +3
Query: 255 RQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYE 434
R +V+ AR E +Y+ PV + Y++ ++ +T RP+G S+++G + D++
Sbjct: 82 RVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLIGGF-DHD 140
Query: 435 G-PQMYMLDPSGVSFSYFGCAVGKANRQQKQ 524
G P+++ +PSG + Y A G+ + ++
Sbjct: 141 GTPRLFKTEPSGAYYEYVANATGRGEKPVRE 171
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/82 (34%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +1
Query: 22 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGA-NKR 198
YD + FSP+GR++QVEYA +A+ ++GT +G+ +G+V A E+ KL + ++
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEK 64
Query: 199 IFHIDEHVGMAVAGLISDADKL 264
++ + +++ VAG+ +DA+ L
Sbjct: 65 VYRLSDNISCTVAGITADANIL 86
Score = 51.6 bits (118), Expect = 6e-07
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Frame = +3
Query: 261 IVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYEGP 440
++ R A++YR+ YG +P++ L + + YT RP+G S++ W + G
Sbjct: 86 LINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLYIGWDKHYGY 145
Query: 441 QMYMLDPSGVSFSYFGCAVGKANRQQ-----KQR*KS*NLE 548
Q+Y DPSG + +G +N Q KQ KS NLE
Sbjct: 146 QLYQSDPSGNYTGWKATCIG-SNHQAAVTLLKQEYKSPNLE 185
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 GYDLSASQFSPDGRVFQVEYAAKAVENSG-TVIGLRGKDGVVFAVEKLITSKLYEPGANK 195
G+D + FSP+GRV+QVEYA KA+ ++ T + ++G D V AV+K + L
Sbjct: 8 GFDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVT 67
Query: 196 RIFHIDEHVGMAVAGLISDA 255
++ I + VG G+I DA
Sbjct: 68 SVYQISQSVGCCAIGMIPDA 87
Score = 48.8 bits (111), Expect = 5e-06
Identities = 21/79 (26%), Positives = 48/79 (60%)
Frame = +3
Query: 264 VETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYEGPQ 443
++ A+ EA++++ + G +P + L ++++ YT + +R GC+++ ++ D +GP+
Sbjct: 91 IKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPE 150
Query: 444 MYMLDPSGVSFSYFGCAVG 500
+Y +DP+G G +VG
Sbjct: 151 VYRVDPAGYYRGMKGVSVG 169
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 60.1 bits (139), Expect = 2e-09
Identities = 35/104 (33%), Positives = 56/104 (53%)
Frame = +1
Query: 10 IGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGA 189
+G Y S + FSP G++ Q+EYA AV+N +GLR KDGVV A E + S L +
Sbjct: 1 MGDHYGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATEN-VGSVLTDD-- 57
Query: 190 NKRIFHIDEHVGMAVAGLISDADKLSRLLVQRHQTTDLSMAVQY 321
++ I +H+G +G+ D R+LV++ + + + Y
Sbjct: 58 QPKVEQISKHIGCVYSGMGPD----FRILVKKARKIAMEYEMMY 97
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +3
Query: 255 RQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYE 434
R +V+ AR A Y YG +P L ++ M YT VRP+G S+++ W
Sbjct: 80 RILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSGGVRPFGASLLIAGWDKNP 139
Query: 435 G-PQMYMLDPSGVSFSYFGCAVGK 503
G P ++ DPSG F++ A+GK
Sbjct: 140 GRPLLFQCDPSGAYFAWKATALGK 163
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/85 (34%), Positives = 48/85 (56%)
Frame = +1
Query: 22 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 201
YD + +SP GR+ QVEYA +A++ +G++ + V K + L K++
Sbjct: 6 YDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDL--SSHQKKV 63
Query: 202 FHIDEHVGMAVAGLISDADKLSRLL 276
+ ID H G+++AGL+SD L+R L
Sbjct: 64 YEIDTHAGVSIAGLLSDGRILARYL 88
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/89 (26%), Positives = 45/89 (50%)
Frame = +3
Query: 255 RQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYE 434
R + ++E S++R Y VP+K L E + + + A T Y RP+G +++ + D +
Sbjct: 82 RILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQYYGRRPFGVGILIAGY-DKD 140
Query: 435 GPQMYMLDPSGVSFSYFGCAVGKANRQQK 521
G + DPS S G ++G ++ +
Sbjct: 141 GAHIIQTDPSAEVVSMHGTSIGARSQSAR 169
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 32.7 bits (71), Expect = 0.32
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Frame = +2
Query: 500 KSQQAAKTEIEKLKLGDLTVKELVREAARIIYLVHDELK--DKQFELELSWVSKDTKGRH 673
K +AAK E+E + ++E + ++ ++++ K +ELE++ ++K T+
Sbjct: 296 KQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTED-E 354
Query: 674 ELVPRELATEAENQAKQALADIEDSDEGEIE 766
+L +LA E EN AK+ L +E+ I+
Sbjct: 355 KLAREQLAGELEN-AKEDLKVVEEEKHTGIQ 384
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 32.7 bits (71), Expect = 0.32
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Frame = +2
Query: 500 KSQQAAKTEIEKLKLGDLTVKELVREAARIIYLVHDELK--DKQFELELSWVSKDTKGRH 673
K +AAK E+E + ++E + ++ ++++ K +ELE++ ++K T+
Sbjct: 296 KQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTED-E 354
Query: 674 ELVPRELATEAENQAKQALADIEDSDEGEIE 766
+L +LA E EN AK+ L +E+ I+
Sbjct: 355 KLAREQLAGELEN-AKEDLKVVEEEKHTGIQ 384
>U41552-5|AAP82646.1| 183|Caenorhabditis elegans Vema (mammalian
ventral midlineantigen) related protein 1, isoform b
protein.
Length = 183
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 473 FFIFWL-RSRKSQQAAKTEIEKLKLGDLTVKEL 568
FF +WL RS + A E+ L + D+TV+EL
Sbjct: 23 FFFYWLTRSEQPLPAPPKELAPLPMSDMTVEEL 55
>U41552-4|AAD31555.1| 198|Caenorhabditis elegans Vema (mammalian
ventral midlineantigen) related protein 1, isoform a
protein.
Length = 198
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 473 FFIFWL-RSRKSQQAAKTEIEKLKLGDLTVKEL 568
FF +WL RS + A E+ L + D+TV+EL
Sbjct: 38 FFFYWLTRSEQPLPAPPKELAPLPMSDMTVEEL 70
>U29378-8|ABA54423.1| 354|Caenorhabditis elegans Hypothetical
protein F08C6.2b protein.
Length = 354
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 194 RGYSILMNMLAWLSQGSYQMQTNCRDCSFRGIKLQISVWQSSTTEVFK 337
RGYS + +L+ YQ+Q +GI+L +S W+S + ++ +
Sbjct: 219 RGYSPKELNVGFLAASKYQIQNKVDSLKSKGIEL-LSTWKSKSDDIIR 265
>U29378-7|AAA68722.2| 362|Caenorhabditis elegans Hypothetical
protein F08C6.2a protein.
Length = 362
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 194 RGYSILMNMLAWLSQGSYQMQTNCRDCSFRGIKLQISVWQSSTTEVFK 337
RGYS + +L+ YQ+Q +GI+L +S W+S + ++ +
Sbjct: 227 RGYSPKELNVGFLAASKYQIQNKVDSLKSKGIEL-LSTWKSKSDDIIR 273
>U21322-1|AAA62542.1| 118|Caenorhabditis elegans Hypothetical
protein K10D2.5 protein.
Length = 118
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +2
Query: 500 KSQQAAKTEIEKLKLGDLTVKELV---REAARIIYLVHDELKD 619
K + AK EIE+L+ D+T++E+ RE R + +V D++ D
Sbjct: 34 KINEPAKYEIEQLEERDMTMEEIESMRREENRCLVIVEDKIYD 76
>U41540-5|AAK39229.2| 666|Caenorhabditis elegans Hypothetical
protein F35H12.4 protein.
Length = 666
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +2
Query: 500 KSQQAAKTEIEKLKLGDLTVKELVREAARIIYLVHDELKDKQFELELSWVSKDTKGRHEL 679
KS+ + I++ L D+ + A I + ++ DK+ E+E +K T R
Sbjct: 2 KSESDVEYTIKQPDLTDVPTQSAKNLADGTIIVGENDTSDKEIEIEKEDTTKPTHDRQSW 61
Query: 680 VPRELATEAEN--QAKQALADIED 745
R +++E+ N A + L I+D
Sbjct: 62 TMRLISSESFNAPMAVEYLNSIQD 85
>AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral
signaling target protein 2 protein.
Length = 661
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -1
Query: 266 DNLSASDMSPATAMPTCSSIWNILLFAPGSYNLDV 162
D + D S A+P +W +L+++ G+ N+DV
Sbjct: 215 DLIDYCDPSVMIAIPRLGIVWGLLVYSNGALNVDV 249
>Z82262-2|CAB05152.1| 248|Caenorhabditis elegans Hypothetical
protein C43F9.5 protein.
Length = 248
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 337 MNEFQCTCTRTHYTVLFGHMVAQSLWAHGQTMKALRC 447
MN CT T YT G + A S GQT + RC
Sbjct: 143 MNGICCTTTGNEYTGSCGGLPAISACGTGQTCGSFRC 179
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,092,902
Number of Sequences: 27780
Number of extensions: 388919
Number of successful extensions: 1228
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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