Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30302X
         (490 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...    71   5e-13
Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...    44   5e-05
Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical pr...    32   0.26 
Z69383-1|CAA93412.1|  409|Caenorhabditis elegans Hypothetical pr...    29   1.4  
Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AL023851-2|CAA19555.2|  209|Caenorhabditis elegans Hypothetical ...    27   5.5  
AF038613-2|AAB92049.1|  477|Caenorhabditis elegans Cytochrome p4...    27   5.5  
Z66495-5|CAA91272.1|  501|Caenorhabditis elegans Hypothetical pr...    27   7.3  
Z19154-3|CAA79555.1|  291|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AL032621-7|CAJ30236.1|  608|Caenorhabditis elegans Hypothetical ...    27   9.7  
AL032621-6|CAA21490.1|  617|Caenorhabditis elegans Hypothetical ...    27   9.7  
AC024843-12|AAF60833.3|  986|Caenorhabditis elegans Hypothetical...    27   9.7  

>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score = 70.9 bits (166), Expect = 5e-13
 Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
 Frame = +3

Query: 42  VGDVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQGFEQVGKAP-AANLPHVLRWYNQIAS 218
           V DVK+  GL   N  LAE+++ +G+  S  D Q F  +G AP A+  P+V RWY  +AS
Sbjct: 2   VADVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVAS 61

Query: 219 YTSAERKTWS 248
           YT AERKTW+
Sbjct: 62  YTDAERKTWA 71



 Score = 48.8 bits (111), Expect = 2e-06
 Identities = 23/53 (43%), Positives = 30/53 (56%)
 Frame = +2

Query: 332 LFGSGDXXXXXXXXXXXXXXXXXXXDKKSKKPALIAKSSILLDVQPWDDDTDM 490
           LFGS D                   +KK+KK   IAKSS++LDV+PWDD+TD+
Sbjct: 90  LFGSDDEEEDAEKAKIVEERLAAYAEKKAKKAGPIAKSSVILDVKPWDDETDL 142


>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score = 44.4 bits (100), Expect = 5e-05
 Identities = 22/53 (41%), Positives = 28/53 (52%)
 Frame = +2

Query: 332 LFGSGDXXXXXXXXXXXXXXXXXXXDKKSKKPALIAKSSILLDVQPWDDDTDM 490
           LFGS D                    KK+ K   IAKSS++LDV+PWDD+TD+
Sbjct: 140 LFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDL 192


>Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical
           protein AC3.3 protein.
          Length = 425

 Score = 31.9 bits (69), Expect = 0.26
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -2

Query: 252 PETMFCVQPKCMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 94
           P  + C QP CM   + + VV+     PAP Q     + Q +++C+QT+   Q
Sbjct: 124 PAPVQC-QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQPIQQ 171


>Z69383-1|CAA93412.1|  409|Caenorhabditis elegans Hypothetical
           protein F13E9.4 protein.
          Length = 409

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +3

Query: 45  GDVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQGFEQVG 161
           G     QG+    Q L E SY  GY  +Q  +QG+ Q G
Sbjct: 46  GSATNRQGMT--GQGLLESSYQQGYGQNQGSMQGYSQQG 82


>Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical
           protein AC3.4 protein.
          Length = 425

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -2

Query: 252 PETMFCVQPKCMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 94
           P  + C QP CM   + + VV+     PA  Q     + Q +++C+QT+   Q
Sbjct: 124 PAPVQC-QPSCMPACEQSCVVQ----TPAAVQCVPQCQQQCQQQCVQTQPIQQ 171


>AL023851-2|CAA19555.2|  209|Caenorhabditis elegans Hypothetical
           protein Y68A4B.2 protein.
          Length = 209

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +3

Query: 270 PVLNPRLPRQQRETTMTTT 326
           PV+N  +P QQ ETT TTT
Sbjct: 8   PVVNSCIPTQQVETTSTTT 26


>AF038613-2|AAB92049.1|  477|Caenorhabditis elegans Cytochrome p450
           family protein 25A5 protein.
          Length = 477

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 66  GLNDLNQYLAEKSYVSGYTPSQADVQGFEQVGKAPA 173
           G+N LNQ L + +Y +G+  +++ V      GK  A
Sbjct: 93  GMNQLNQSLLQNTYATGWKHTRSAVAPIFSTGKMKA 128


>Z66495-5|CAA91272.1|  501|Caenorhabditis elegans Hypothetical
           protein C36A4.6 protein.
          Length = 501

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +3

Query: 66  GLNDLNQYLAEKSYVSGYTPSQADVQGFEQVGKAPA 173
           G+N LNQ L + +Y +G+  +++ +      GK  A
Sbjct: 117 GMNQLNQSLLQNTYATGWKHTRSAIAPIFSTGKMKA 152


>Z19154-3|CAA79555.1|  291|Caenorhabditis elegans Hypothetical
           protein C40H1.4 protein.
          Length = 291

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 157 LARRRPLTFPTYYDGIIKLLHTLRLNAKH 243
           + R+RPL F  YY     L++T+   A+H
Sbjct: 152 ILRKRPLIFLHYYHHAAVLIYTVHSGAEH 180


>AL032621-7|CAJ30236.1|  608|Caenorhabditis elegans Hypothetical
           protein Y45F3A.3b protein.
          Length = 608

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 196 DGIIKLLHTLRLNAKHGLRAQPIDR 270
           DG +K L +L L  KH L  + +DR
Sbjct: 159 DGAVKTLTSLNLYGKHKLATEAVDR 183


>AL032621-6|CAA21490.1|  617|Caenorhabditis elegans Hypothetical
           protein Y45F3A.3a protein.
          Length = 617

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 196 DGIIKLLHTLRLNAKHGLRAQPIDR 270
           DG +K L +L L  KH L  + +DR
Sbjct: 168 DGAVKTLTSLNLYGKHKLATEAVDR 192


>AC024843-12|AAF60833.3|  986|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.10 protein.
          Length = 986

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 204 NQIASYTSAERKTWSQGPAH*PPVLNPRLPRQQRET 311
           N+ + Y    RK +   P H PP L   LP + + T
Sbjct: 849 NKDSDYKPIVRKEFESAPIHLPPKLQKSLPFKMKPT 884


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,915,605
Number of Sequences: 27780
Number of extensions: 146113
Number of successful extensions: 355
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 354
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)