Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30298
         (396 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   2.5  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   3.4  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   3.4  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   3.4  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   3.4  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   3.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   7.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   7.7  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         20   7.7  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 340 SLCAPMSTLYMQCKKKK 390
           ++C   S L +QC KKK
Sbjct: 153 TMCVTFSNLGIQCVKKK 169


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 5   RDYYRTKKKHNKT 43
           R+ +RT K HNKT
Sbjct: 391 REIWRTVKYHNKT 403


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 5   RDYYRTKKKHNKT 43
           R+ +RT K HNKT
Sbjct: 391 REIWRTVKYHNKT 403


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 5   RDYYRTKKKHNKT 43
           R+ +RT K HNKT
Sbjct: 391 REIWRTVKYHNKT 403


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 5   RDYYRTKKKHNKT 43
           R+ +RT K HNKT
Sbjct: 391 REIWRTVKYHNKT 403


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 5   RDYYRTKKKHNKT 43
           R+ +RT K HNKT
Sbjct: 390 REIWRTVKYHNKT 402


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 180  YHKHRPREQWPG*QKPGEQRPGDRVTMST 266
            ++K R    WP   K  E++PG + + S+
Sbjct: 1137 WNKERKICDWPKSAKCEEKKPGHKPSTSS 1165


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +1

Query: 166 LVGRCTTNTGRANNGRANKS 225
           L G+C  N     NG+  +S
Sbjct: 766 LTGQCVRNDSSDTNGKETRS 785


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +1

Query: 166 LVGRCTTNTGRANNGRANKS 225
           L G+C  N     NG+  +S
Sbjct: 658 LTGQCVRNDSSDTNGKETRS 677


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = +2

Query: 5   RDYYRTKKKHNKTEITKRNKTNK 73
           R Y +++ +HN++   ++ KT +
Sbjct: 201 RQYSQSRGRHNQSRSKRQPKTGR 223


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,054
Number of Sequences: 336
Number of extensions: 1277
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8435920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)