Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30298
         (396 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    25   1.3  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    24   1.8  
Z49832-1|CAA89993.1|  155|Anopheles gambiae serine proteinase pr...    24   2.3  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   2.3  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    22   7.1  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    22   7.1  

>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 300 SHSDRGTRHVRTCSSSLDRPVFVRP 226
           + +D+ TRH+ T   S D PV  +P
Sbjct: 102 TENDKLTRHLNTVKFSFDEPVPQKP 126


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 150 LPERALSRQMYHKHRPREQWPG*QKPGEQR 239
           LP+++  RQ    HR  +QWP  Q+ G+Q+
Sbjct: 259 LPQQSAQRQP--AHRQHQQWPH-QQNGQQQ 285


>Z49832-1|CAA89993.1|  155|Anopheles gambiae serine proteinase
           protein.
          Length = 155

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 3   GAITTGQRKSTTKQKLRKETKQINTCRKPL 92
           GA+  G+R S+T QK++ +      C K L
Sbjct: 95  GALGFGERLSSTLQKIQLQALDETICAKRL 124


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 153 PERALSRQMYHKHRPREQWPG*QKPGEQRP 242
           P+    RQ     + ++Q P  Q+P +QRP
Sbjct: 454 PQLRQQRQQQQPQQQQQQRPQQQRPQQQRP 483



 Score = 23.8 bits (49), Expect = 2.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 174 QMYHKHRPREQWPG*QKPGEQRPGDR 251
           Q   + RP++Q P  Q+P +QR   R
Sbjct: 466 QQQQQQRPQQQRPQQQRPQQQRSQQR 491


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 297 HSDRGTRHVRTCSSSLDRPVFV 232
           H  RG+RH R  S +   P F+
Sbjct: 834 HPPRGSRHTRQGSEASSPPPFL 855


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 196  RANNGRANKSRANKDRAIE 252
            R+N GRA ++R  + RA E
Sbjct: 1063 RSNRGRARRTRRGRRRAEE 1081


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 338,931
Number of Sequences: 2352
Number of extensions: 5677
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31212099
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)