Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30298
         (396 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X54559-1|CAB56793.1| 1390|Homo sapiens proto-oncogene protein.         29   7.4  
J02958-1|AAA59591.1| 1408|Homo sapiens MET protein.                    29   7.4  
BC130420-1|AAI30421.1| 1390|Homo sapiens met proto-oncogene (hep...    29   7.4  
AC002080-1|AAB54047.1|  754|Homo sapiens receptor protein tyrosi...    29   7.4  

>X54559-1|CAB56793.1| 1390|Homo sapiens proto-oncogene protein.
          Length = 1390

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -1

Query: 285 GTRHVRTCSSSLDRPVFVRPAFVSPAIVRA-ACVCGT 178
           G RH ++CS  L  P FV+  +     VR+  C+ GT
Sbjct: 519 GCRHFQSCSQCLSAPPFVQCGWCHDKCVRSEECLSGT 555


>J02958-1|AAA59591.1| 1408|Homo sapiens MET protein.
          Length = 1408

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -1

Query: 285 GTRHVRTCSSSLDRPVFVRPAFVSPAIVRA-ACVCGT 178
           G RH ++CS  L  P FV+  +     VR+  C+ GT
Sbjct: 519 GCRHFQSCSQCLSAPPFVQCGWCHDKCVRSEECLSGT 555


>BC130420-1|AAI30421.1| 1390|Homo sapiens met proto-oncogene
           (hepatocyte growth factor receptor) protein.
          Length = 1390

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -1

Query: 285 GTRHVRTCSSSLDRPVFVRPAFVSPAIVRA-ACVCGT 178
           G RH ++CS  L  P FV+  +     VR+  C+ GT
Sbjct: 519 GCRHFQSCSQCLSAPPFVQCGWCHDKCVRSEECLSGT 555


>AC002080-1|AAB54047.1|  754|Homo sapiens receptor protein tyrosine
           kinase protein.
          Length = 754

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -1

Query: 285 GTRHVRTCSSSLDRPVFVRPAFVSPAIVRA-ACVCGT 178
           G RH ++CS  L  P FV+  +     VR+  C+ GT
Sbjct: 519 GCRHFQSCSQCLSAPPFVQCGWCHDKCVRSEECLSGT 555


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,287,148
Number of Sequences: 237096
Number of extensions: 814047
Number of successful extensions: 2414
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2412
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)