Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30298
(396 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin pr... 22 2.9
AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein. 22 2.9
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 5.1
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 5.1
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 5.1
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 5.1
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 5.1
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 5.1
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 5.1
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 20 9.0
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 20 9.0
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 20 9.0
>AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin
precursor protein.
Length = 95
Score = 21.8 bits (44), Expect = 2.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 211 GHCSRGLCLWYICR 170
GHC +G+C ICR
Sbjct: 72 GHCEKGVC---ICR 82
>AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein.
Length = 57
Score = 21.8 bits (44), Expect = 2.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 211 GHCSRGLCLWYICR 170
GHC +G+C ICR
Sbjct: 47 GHCEKGVC---ICR 57
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 5.1
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +1
Query: 16 QDKEKAQQNRNYEKKQNK 69
+++E ++NR YEK N+
Sbjct: 8 RNREYREKNRRYEKLHNE 25
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 5.1
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +1
Query: 16 QDKEKAQQNRNYEKKQNK 69
+++E ++NR YEK N+
Sbjct: 8 RNREYREKNRRYEKLHNE 25
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 5.1
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +1
Query: 16 QDKEKAQQNRNYEKKQNK 69
+++E ++NR YEK N+
Sbjct: 8 RNREYREKNRRYEKLHNE 25
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 5.1
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +1
Query: 16 QDKEKAQQNRNYEKKQNK 69
+++E ++NR YEK N+
Sbjct: 8 RNREYREKNRRYEKLHNE 25
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 5.1
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +1
Query: 16 QDKEKAQQNRNYEKKQNK 69
+++E ++NR YEK N+
Sbjct: 8 RNREYREKNRRYEKLHNE 25
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 5.1
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +1
Query: 16 QDKEKAQQNRNYEKKQNK 69
+++E ++NR YEK N+
Sbjct: 8 RNREYREKNRRYEKLHNE 25
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 5.1
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +1
Query: 16 QDKEKAQQNRNYEKKQNK 69
+++E ++NR YEK N+
Sbjct: 8 RNREYREKNRRYEKLHNE 25
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 20.2 bits (40), Expect = 9.0
Identities = 11/34 (32%), Positives = 12/34 (35%)
Frame = +3
Query: 15 TGQRKSTTKQKLRKETKQINTCRKPLCRQMYHEH 116
T + K TKQ L Q P Q H H
Sbjct: 537 TEEEKKKTKQSLSPSENQSKMEILPKTTQRQHHH 570
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 20.2 bits (40), Expect = 9.0
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = -2
Query: 329 YTADHLETSDLIPIEAPVTCG 267
Y +++ + IP+ P+ CG
Sbjct: 105 YYKNYIINIEQIPVPVPIYCG 125
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 20.2 bits (40), Expect = 9.0
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = -2
Query: 329 YTADHLETSDLIPIEAPVTCG 267
Y +++ + IP+ P+ CG
Sbjct: 346 YYKNYIINIEQIPVPVPIYCG 366
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,579
Number of Sequences: 438
Number of extensions: 1618
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9761793
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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