Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30297
         (378 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   0.77 
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   1.8  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    20   9.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   9.5  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    20   9.5  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    20   9.5  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    20   9.5  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    20   9.5  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    20   9.5  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 0.77
 Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = -2

Query: 377 FFFFFLTLIEV--YFTYCETRHIN 312
           F F F+TL+ +  YF  CE   +N
Sbjct: 447 FIFTFITLLTIGLYFQLCEFSRLN 470


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 65  PLEPWTAMDASSRPSFTST 9
           P E W  M A+  P+FTS+
Sbjct: 80  PGEKWKEMRATLSPAFTSS 98


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 49  RRWMHPHGPRLRAL 8
           R W  P G R RAL
Sbjct: 345 RHWQIPLGRRFRAL 358


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 377 FFFFFLTLIEVYFTYC 330
           F FF + LI +   YC
Sbjct: 243 FLFFIIPLIILLILYC 258


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 10/41 (24%), Positives = 17/41 (41%)
 Frame = +1

Query: 61  SGYTAPDGTPIQITYTADANGYQPSGAHLPTTPAPLPIPDY 183
           SG   PD     +   +   G++ + +   TTP P  I  +
Sbjct: 2   SGAPIPDVGQSWLKSNSSLAGFEVNSSEQLTTPTPTDINSF 42


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -1

Query: 243 TLADLWLGW 217
           T  DLWL W
Sbjct: 379 TRGDLWLSW 387


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 201 VHQNSPTQARGRPTYLS 251
           +HQ S T  RGR   L+
Sbjct: 319 IHQGSVTDERGRSITLT 335


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = +2

Query: 38  HPSPSKVQAATLPLMV 85
           HP P  +Q    P+M+
Sbjct: 138 HPDPGSLQVPGAPMMM 153


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 10/30 (33%), Positives = 12/30 (40%)
 Frame = +1

Query: 52  QGSSGYTAPDGTPIQITYTADANGYQPSGA 141
           Q S GY+          Y A + GY P  A
Sbjct: 327 QDSMGYSMGSAYDQSSAYDASSCGYDPMHA 356


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,997
Number of Sequences: 336
Number of extensions: 1673
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7803226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)