Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30297
(378 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0795 - 31792231-31794780 32 0.13
03_02_0400 - 8135283-8135490,8136047-8136213,8136289-8136477,813... 31 0.23
07_01_0526 - 3913713-3913881,3914505-3914677 31 0.30
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 31 0.40
04_01_0146 + 1701744-1701860,1702036-1702112,1702247-1702344,170... 29 0.92
04_03_0904 + 20717005-20718087 29 1.2
12_02_0434 + 19025539-19026027,19026474-19027553 29 1.6
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 28 2.1
03_06_0338 + 33240111-33240860,33241248-33241536,33242494-33242621 28 2.1
05_05_0173 + 22956927-22958615 28 2.8
11_06_0330 - 22401751-22402221 27 3.7
02_02_0012 - 6092081-6092170,6092282-6092369,6093659-6094608 27 3.7
11_06_0667 + 26071774-26072070,26072352-26073153,26073209-260734... 27 4.9
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 27 4.9
04_04_0673 - 27168305-27168874,27168977-27169099,27169180-271694... 27 4.9
04_03_1022 - 21778315-21779007 27 4.9
01_01_1059 - 8356328-8356645,8357567-8357865,8358119-8358124,835... 27 4.9
10_01_0185 + 2069800-2070672 27 6.5
08_01_0914 + 9010613-9013316,9013537-9013748 27 6.5
06_03_1390 - 29831098-29831514,29831613-29831735,29832238-298325... 27 6.5
06_03_0834 - 25206825-25207075,25207326-25207424,25207531-252082... 27 6.5
06_01_0486 - 3455030-3455770 27 6.5
05_06_0167 - 26104527-26104567,26105130-26105226,26105377-261054... 27 6.5
05_06_0124 - 25822176-25822633,25822738-25825420 27 6.5
05_05_0091 + 22319411-22320901 27 6.5
12_02_0058 + 13015401-13016654 26 8.6
03_05_1101 - 30408944-30410410 26 8.6
>02_05_0795 - 31792231-31794780
Length = 849
Score = 32.3 bits (70), Expect = 0.13
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 22 EGREDASIAVQGSSGYTAPDGTPIQITYTADANGYQPSGAHLPTTPAP 165
EG A+ ++G +GY A D P++ +A +P PT+ AP
Sbjct: 47 EGAAAAAGTIEGEAGYAAADADPMEDEAADEAGAAEPMEDDPPTSSAP 94
>03_02_0400 -
8135283-8135490,8136047-8136213,8136289-8136477,
8136560-8136655,8136746-8136874,8136947-8137123,
8137256-8137366,8138592-8138792,8139022-8139186,
8139293-8139527,8139618-8139745,8139833-8139928,
8140017-8140112,8140252-8140325,8140393-8140462,
8140556-8140665,8140753-8140906,8141040-8141155,
8141259-8141379,8141464-8141641,8142331-8142489,
8142619-8142732,8142821-8143000,8143098-8143177
Length = 1117
Score = 31.5 bits (68), Expect = 0.23
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 121 GYQPSGAHLPTTPAPLPIP 177
G+ P GAH P PAP P+P
Sbjct: 229 GFPPLGAHAPFQPAPTPVP 247
>07_01_0526 - 3913713-3913881,3914505-3914677
Length = 113
Score = 31.1 bits (67), Expect = 0.30
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 13 LVNEGREDASIAVQGSSGYTAPDGTPIQITYTADANGYQPSGAHLPTTPAPLPIPDYIAR 192
L EG +DA + Q S+ + G I + TA +GAH P IP Y R
Sbjct: 44 LAGEGWDDA-VEPQSSTSHIVLSGLRINLNLTAATADPAKTGAHDVRLAPPPYIPQYNER 102
Query: 193 AI-EYIRTH 216
+ EY R H
Sbjct: 103 SYHEYWREH 111
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 30.7 bits (66), Expect = 0.40
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 103 YTADANGYQPSGAHLPTTPAPLPIPDYIARAIEYIRTHPPKP 228
++A ++ P + +T APLP P + E++ HPP P
Sbjct: 46 HSASSSSSSPPPSSSASTAAPLPAPPTPSPVPEHLHHHPPPP 87
>04_01_0146 +
1701744-1701860,1702036-1702112,1702247-1702344,
1704073-1704228,1704671-1705290,1705397-1705458,
1705551-1705941,1706404-1706575,1706686-1707212
Length = 739
Score = 29.5 bits (63), Expect = 0.92
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 121 RWRQQCK*SEWEYHQGQCSRLNLGRRWMHPH 29
+W+ QC+ E + QC+R +G RW H
Sbjct: 169 KWKGQCQAGE-AFRSNQCNRKIIGARWYDKH 198
>04_03_0904 + 20717005-20718087
Length = 360
Score = 29.1 bits (62), Expect = 1.2
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +1
Query: 67 YTAPDGTPIQITYTADANGYQPSGAHLPTTPAPLPIP 177
YT P TP TYT P PT PA P P
Sbjct: 73 YTPPKPTPTPPTYTPTPKPTPPPYTPKPTPPAHTPTP 109
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +1
Query: 109 ADANGYQPSGAHLPTTPAPLPIPDYIARAIEYIRTHPPKPE 231
ADA GY PT P P P+ + + H PKPE
Sbjct: 22 ADAGGYGGGYTPTPTPVKPAPKPEKPPKEHKPPHHHEPKPE 62
>12_02_0434 + 19025539-19026027,19026474-19027553
Length = 522
Score = 28.7 bits (61), Expect = 1.6
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 184 IARAIEYIRTHPPKPEVGQRI 246
++RAIEY+ THP +P + + I
Sbjct: 334 VSRAIEYLHTHPTRPVIHRDI 354
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 28.3 bits (60), Expect = 2.1
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +1
Query: 70 TAPDGTPIQITYTADANGYQPSGAHLPTTPAPLPI----PDYIARAIEYIRTHP 219
T+P+ +P +Y + Y PS A+ P++P P P+Y + Y T P
Sbjct: 1735 TSPNYSPTSPSYNPSSAKYSPSHAYSPSSPRLSPYSQTSPNYSPTSPTYSPTSP 1788
>03_06_0338 + 33240111-33240860,33241248-33241536,33242494-33242621
Length = 388
Score = 28.3 bits (60), Expect = 2.1
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +1
Query: 109 ADANGYQPSGAHLPTTPAPLPIPDYIARAIEYIRTHPPKP 228
A + PS AH P P P P+ R + HPP P
Sbjct: 160 APTSAAPPSPAHAPELKKPPPPPEAHHRPTKSYTGHPPPP 199
>05_05_0173 + 22956927-22958615
Length = 562
Score = 27.9 bits (59), Expect = 2.8
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Frame = +1
Query: 124 YQPSG--AHLPTTPAPLPIPDYI---ARAIEYIRTHPP 222
Y PS AH P P P+P P+ I A +E+ +HPP
Sbjct: 86 YDPSAPEAHPPYVPPPVPPPEAIPELADDLEFGFSHPP 123
>11_06_0330 - 22401751-22402221
Length = 156
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 148 PTTPAPLPIPDYIARAIEYIRTHPPKPE 231
P P+P DYIA + R PPKPE
Sbjct: 39 PAGKVPMP-DDYIATILSLKREPPPKPE 65
>02_02_0012 - 6092081-6092170,6092282-6092369,6093659-6094608
Length = 375
Score = 27.5 bits (58), Expect = 3.7
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -2
Query: 236 PTSGLGG*VLMYSMAR-AM*SGIGRGAGVVGRWAPEGWYP 120
P G GG L +A A G R VVG W PE W P
Sbjct: 48 PLPGAGGLPLFCQLAAVAACGGERRRLVVVGGWDPETWAP 87
>11_06_0667 +
26071774-26072070,26072352-26073153,26073209-26073411,
26075078-26075521,26075703-26075758,26076323-26076402,
26077098-26077174,26077279-26078301
Length = 993
Score = 27.1 bits (57), Expect = 4.9
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 184 IARAIEYIRTHPPKPEVGQRI 246
+ RAI+Y+ THP +P + + I
Sbjct: 283 VCRAIDYLHTHPTRPVIHRDI 303
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +1
Query: 70 TAPDGTPIQITYTADANGYQPSGAHLPTTP-APLPIPDYIARAIEYIRTHPPKP 228
T P +P+ + A A+ P+ TTP +P P + A + PP P
Sbjct: 27 TTPTTSPLPLAPAAAASSSNPNATPADTTPTSPPPASPPLPSATPPLAASPPPP 80
>04_04_0673 -
27168305-27168874,27168977-27169099,27169180-27169440,
27169723-27169970,27170403-27170483,27171530-27171902
Length = 551
Score = 27.1 bits (57), Expect = 4.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 19 NEGREDASIAVQGSSGYTAPD 81
+EG+ S AV G+ GY APD
Sbjct: 353 SEGQTHVSTAVMGTYGYAAPD 373
>04_03_1022 - 21778315-21779007
Length = 230
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 130 PSGAHLPTTPAPLPIPDYIARAIEYIRTHPPKP 228
P H P TPAP P P HPP P
Sbjct: 66 PPNYHPPHTPAPAPAPGPYIPPHHPHHHHPPTP 98
>01_01_1059 -
8356328-8356645,8357567-8357865,8358119-8358124,
8358276-8358720,8359722-8360036
Length = 460
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 139 AHLPTTPAPLPIPDYIARAIEYIRTHPPKPEVGQRI*VIDS 261
AH PT+ A PDY RA ++ T PP + + DS
Sbjct: 393 AH-PTSYAQTSYPDYDQRATQFAATGPPNDSKSEYPYITDS 432
>10_01_0185 + 2069800-2070672
Length = 290
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 176 GIGRGAGVVGRWAPEG 129
G+GR GVVGRW G
Sbjct: 214 GLGRSLGVVGRWERAG 229
>08_01_0914 + 9010613-9013316,9013537-9013748
Length = 971
Score = 26.6 bits (56), Expect = 6.5
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 28 REDASIAVQGSSGYTAPD-GTPIQITYTADANGY 126
+E +S ++G+ GY AP+ G+ Q++ D Y
Sbjct: 885 KESSSFVIKGTIGYVAPEYGSGSQVSMDGDIYSY 918
>06_03_1390 -
29831098-29831514,29831613-29831735,29832238-29832501,
29833313-29833654
Length = 381
Score = 26.6 bits (56), Expect = 6.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 22 EGREDASIAVQGSSGYTAPD 81
EG+ S AV G+ GY APD
Sbjct: 235 EGKTHVSTAVVGTHGYAAPD 254
>06_03_0834 -
25206825-25207075,25207326-25207424,25207531-25208285,
25209073-25209388,25210472-25210514
Length = 487
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 82 GTPIQITYTADANGYQPSGAHLPTTPAP 165
GTP +I Y + G P+G+H P T P
Sbjct: 129 GTPAKIYYKYE--GTSPAGSHKPNTAVP 154
>06_01_0486 - 3455030-3455770
Length = 246
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +1
Query: 142 HLPTTPAPLPIPDYIARAIEYIRTHPPKP 228
+ P TP P P P Y+ Y+ + P P
Sbjct: 79 YTPPTPRPPPTPPYVPSPPPYVPPYIPPP 107
>05_06_0167 -
26104527-26104567,26105130-26105226,26105377-26105415,
26105628-26105678,26105978-26106059,26106222-26106282,
26106380-26106509,26106630-26106758,26107057-26107314
Length = 295
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 160 APLPIPDYIARAIEYIRTHPPKPEV 234
APLP P +A ++ +RT P P +
Sbjct: 2 APLPSPPLLAESLATLRTASPSPPI 26
>05_06_0124 - 25822176-25822633,25822738-25825420
Length = 1046
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 10 VLVNEGREDASIAVQGSSGYTAPD 81
+LV G D AV GS GY AP+
Sbjct: 872 MLVQAGTPDTMTAVAGSFGYMAPE 895
>05_05_0091 + 22319411-22320901
Length = 496
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 136 GAHLPTTPAPLPIPDYIARAIEYIRTHP 219
GAH+P P PLP + + + + HP
Sbjct: 241 GAHVPGLPPPLPPAEAVHSRLSKLLLHP 268
>12_02_0058 + 13015401-13016654
Length = 417
Score = 26.2 bits (55), Expect = 8.6
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +1
Query: 112 DANGYQPSGAHLPTTPAPLPIPDYIA--RAIEYIRTHPPKP 228
D+ +Q S P PAPLP+P A R + + P P
Sbjct: 160 DSVAHQESAVLQPQEPAPLPVPAAPAPPRQVPVVTQQAPPP 200
>03_05_1101 - 30408944-30410410
Length = 488
Score = 26.2 bits (55), Expect = 8.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 149 GRWAPEGW 126
GRWAPEGW
Sbjct: 325 GRWAPEGW 332
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,831,621
Number of Sequences: 37544
Number of extensions: 210242
Number of successful extensions: 867
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 612769692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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