Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30297
         (378 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    28   0.099
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    24   1.6  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   4.9  
L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     22   6.5  

>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 28.3 bits (60), Expect = 0.099
 Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +1

Query: 49  VQGSSGYTAPDGTPIQITYTADA-NGY 126
           VQGS     PDGT   + YTAD  NG+
Sbjct: 49  VQGSYSVVDPDGTKRTVDYTADPHNGF 75


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +1

Query: 67  YTAPDGTPIQITYTADANGYQPSGAHLPTTPAPL 168
           +T  DG   +   T   NG Q +   LPT  A L
Sbjct: 360 FTELDGVTFETKMTKSFNGMQTASVKLPTKLATL 393


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 52  QGSSGYTAPDGTP 90
           +G  GYT P+G P
Sbjct: 292 KGDKGYTGPEGPP 304


>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -2

Query: 320 HINDRQCYGLRCFNNSRPYQLS 255
           H N R  YG+  +   +PY+++
Sbjct: 317 HDNQRGDYGILTYKQPKPYKMA 338


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 372,597
Number of Sequences: 2352
Number of extensions: 7334
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 28646721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)