BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30295 (592 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_03_1667 + 28484069-28484071,28484151-28484240,28484339-284844... 131 4e-31 05_01_0401 + 3169979-3169981,3170071-3170160,3170556-3170684,317... 130 1e-30 03_02_0954 - 12687373-12687582,12688885-12689067,12689160-126892... 111 3e-25 04_01_0249 - 3284107-3286377 29 2.1 06_01_1101 - 9044679-9045320,9045484-9045890,9046020-9046274,904... 29 2.8 03_06_0569 + 34789286-34790052,34791216-34791512,34791604-347918... 29 2.8 11_01_0572 + 4565353-4565535,4566856-4567095,4567922-4568086,456... 28 6.4 09_04_0365 - 16962608-16963174,16963301-16963486,16963824-169638... 27 8.5 03_06_0500 - 34361139-34362006,34362295-34362818,34362908-343631... 27 8.5 03_05_0379 + 23628200-23628366,23629074-23629133,23630177-236302... 27 8.5 02_05_0598 + 30250535-30251218 27 8.5 >07_03_1667 + 28484069-28484071,28484151-28484240,28484339-28484491, 28484575-28484757,28486137-28486295 Length = 195 Score = 131 bits (317), Expect = 4e-31 Identities = 61/90 (67%), Positives = 73/90 (81%) Frame = +1 Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 426 G T+D R+Y++P M VAAL TE ARARI+ AGGE LTFDQLALRAP G+ TVL++G + Sbjct: 91 GTVTDDKRIYEVPAMKVAALRFTETARARIINAGGECLTFDQLALRAPLGQNTVLLRGPK 150 Query: 427 NAREAVRHFGPAPGAPRSHTKPYVRTKDMK 516 NAREAV+HFGPAPG P S+TKPYVR+K K Sbjct: 151 NAREAVKHFGPAPGVPHSNTKPYVRSKGRK 180 Score = 60.1 bits (139), Expect = 1e-09 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 7/91 (7%) Frame = +2 Query: 2 GID-INHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 178 GID + ++K +RT +S+D+ T + FN ++L+RLFMS+ NRPP Sbjct: 2 GIDLVAGGRNKKTKRTAPRSEDVYLKLIVKLYRFLVRRTKSHFNAVILKRLFMSKTNRPP 61 Query: 179 ISVSRLARHM--KKPTREGL----IAVVVGT 253 +S+ RL R M K P R + IAV+VGT Sbjct: 62 LSMRRLVRFMEGKVPDRHAISGDQIAVIVGT 92 >05_01_0401 + 3169979-3169981,3170071-3170160,3170556-3170684, 3170814-3170999,3172001-3172159 Length = 188 Score = 130 bits (313), Expect = 1e-30 Identities = 62/90 (68%), Positives = 71/90 (78%) Frame = +1 Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 426 G T+D R+ +IPKM V AL TE ARARI+ AGGE LTFDQLALRAP G+ TVL++G + Sbjct: 84 GTVTDDKRIQEIPKMKVTALRFTETARARIVNAGGECLTFDQLALRAPLGENTVLLRGPK 143 Query: 427 NAREAVRHFGPAPGAPRSHTKPYVRTKDMK 516 NAREAVRHFG APG P SHTKPYVR+K K Sbjct: 144 NAREAVRHFGKAPGVPHSHTKPYVRSKGRK 173 Score = 61.3 bits (142), Expect = 6e-10 Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 1/85 (1%) Frame = +2 Query: 2 GID-INHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 178 GID + ++K +RT +S D+ T + FN ++L+RLFMS+ NRPP Sbjct: 2 GIDLVAGGRNKKTKRTAPRSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPP 61 Query: 179 ISVSRLARHMKKPTREGLIAVVVGT 253 +S+ RLA+ M + E IAV+VGT Sbjct: 62 LSLRRLAKFM-EGKEENNIAVIVGT 85 >03_02_0954 - 12687373-12687582,12688885-12689067,12689160-12689288, 12689375-12689464,12689548-12689550 Length = 204 Score = 111 bits (268), Expect = 3e-25 Identities = 60/107 (56%), Positives = 72/107 (67%), Gaps = 17/107 (15%) Frame = +1 Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKT------- 405 G T+D R+Y++P M VAAL TE ARARI+ GGE LTFDQLALRAP G+ T Sbjct: 83 GTVTDDKRVYEVPAMKVAALRFTETARARIVNTGGECLTFDQLALRAPLGQNTYIAMPEI 142 Query: 406 ----------VLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKDMK 516 VL++G +NAREAV+HFGPAPG P S+TKPYVR+K K Sbjct: 143 LTIDNFALLQVLLRGPKNAREAVKHFGPAPGVPHSNTKPYVRSKGRK 189 Score = 63.7 bits (148), Expect = 1e-10 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 1/85 (1%) Frame = +2 Query: 2 GID-INHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 178 GID + ++K +RT KS D+ T + FN ++LRRLFMS+ NRPP Sbjct: 2 GIDLVAGGRNKKTKRTAPKSDDVYLKLIVKLYRFLVRRTKSPFNAVILRRLFMSKTNRPP 61 Query: 179 ISVSRLARHMKKPTREGLIAVVVGT 253 +S+ RL R M+ +E IAV+VGT Sbjct: 62 LSLRRLVRFME--GKENQIAVIVGT 84 >04_01_0249 - 3284107-3286377 Length = 756 Score = 29.5 bits (63), Expect = 2.1 Identities = 16/49 (32%), Positives = 28/49 (57%) Frame = +2 Query: 137 VLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTAQMT*DCTRY 283 ++RRL +S +N + R+ + KKPTR + + +G + +CTRY Sbjct: 359 LIRRLIVSDLN-----LFRILDNNKKPTRYRMWSQTIGQYNLLHECTRY 402 >06_01_1101 - 9044679-9045320,9045484-9045890,9046020-9046274, 9046375-9046498,9047237-9047289,9047388-9047648, 9047795-9047848,9047975-9048458,9048554-9048592 Length = 772 Score = 29.1 bits (62), Expect = 2.8 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Frame = -2 Query: 249 PTTTAIKPSRVGFFMWR-AKRDTEIGGRLIRLIKSR 145 P TTA KP RV F + + K D E+ G L L+++R Sbjct: 676 PNTTAPKPKRVRFALPKDTKIDREVRGELQELMEAR 711 >03_06_0569 + 34789286-34790052,34791216-34791512,34791604-34791835, 34792334-34792391,34792800-34792931,34793108-34793246, 34793460-34793622,34793693-34793734 Length = 609 Score = 29.1 bits (62), Expect = 2.8 Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 8/71 (11%) Frame = -1 Query: 334 CVHELFR*HEEQPPSSSVSCTVSRHLCCPH-----YHGNQTLTSWLLHVARQTRHRDW-- 176 C+HE + E+ S C ++ CC H ++ N+T S L W Sbjct: 458 CLHERYNQAHEKEYGKSNLCGLALATCCHHLCQWNHYANKTFLSGLGITEEDFHTMTWFS 517 Query: 175 -WPVDTAHKEP 146 W VD H P Sbjct: 518 SWAVDGDHSSP 528 >11_01_0572 + 4565353-4565535,4566856-4567095,4567922-4568086, 4568612-4568887 Length = 287 Score = 27.9 bits (59), Expect = 6.4 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = +2 Query: 359 LLLISWLFVLRLARRQYWYKVSEML 433 LL+++WLFV+ RR W +V E+L Sbjct: 143 LLVLAWLFVIDFGRR-VWGEVDELL 166 >09_04_0365 - 16962608-16963174,16963301-16963486,16963824-16963896, 16964307-16964497,16964982-16965198,16965394-16965797, 16966593-16966658,16966668-16966721,16966945-16967079, 16967194-16967391,16967734-16967918,16968990-16969527 Length = 937 Score = 27.5 bits (58), Expect = 8.5 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = -2 Query: 303 SSHRHLRYLVQSHVICAVPTTTAIKPSRVGFFMWRAKRDTEIG 175 +S L ++ + C +PS+V FFMW A+R+ G Sbjct: 875 ASAYELFFMANTEARCGSLIWHTREPSKVKFFMWLAEREVSHG 917 >03_06_0500 - 34361139-34362006,34362295-34362818,34362908-34363125, 34363259-34363406 Length = 585 Score = 27.5 bits (58), Expect = 8.5 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%) Frame = -2 Query: 516 FHVLGANIGFSVRARCSWSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQ 337 F ++G GF++ + +V + S+ + LY + A SQLI + + +S Sbjct: 455 FLLMGIGDGFALVGLQEYFYDQVPDSMRSLGIGLYLSVIGAGSFLSSQLITAVDRVTSHG 514 Query: 336 NACTSFFG-NMKSSHRHLRY 280 A +FG ++ SS L Y Sbjct: 515 GAAAGWFGKDLNSSRLDLFY 534 >03_05_0379 + 23628200-23628366,23629074-23629133,23630177-23630209, 23630253-23630665,23631522-23632008,23632623-23633334 Length = 623 Score = 27.5 bits (58), Expect = 8.5 Identities = 14/43 (32%), Positives = 18/43 (41%) Frame = +3 Query: 384 CSDWQEDSTGTRSAKCS*GSASLWPCSRSTALSH*TLCSHQGH 512 CS E + G +C G W C +T L+H S GH Sbjct: 365 CSKPIEKNGGCNHVRCKCGQCLCWLCGAATGLAH-NWTSIDGH 406 >02_05_0598 + 30250535-30251218 Length = 227 Score = 27.5 bits (58), Expect = 8.5 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Frame = -3 Query: 359 RISP-PAAKMRARAFSVT*RAATVIFGILYSLTSFVLSPLPRQSNPHELASSCGAPNETQ 183 R +P PA + +AR + A G+ ++ + + +P PR SNP+ + GA Sbjct: 18 RAAPVPALRSQARHPLLLGHAGETALGV-WATRARLPAPPPRASNPNNDNDNSGAVEAPD 76 Query: 182 RLVA 171 RLVA Sbjct: 77 RLVA 80 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,108,500 Number of Sequences: 37544 Number of extensions: 385822 Number of successful extensions: 1118 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1068 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1117 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1400060088 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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