Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30294X
(562 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5HW36 Cluster: Membrane protein, putative; n=12; Campy... 36 0.49
UniRef50_Q7RPX5 Cluster: Putative uncharacterized protein PY0132... 36 0.85
UniRef50_Q23FL2 Cluster: Hsp90 protein; n=1; Tetrahymena thermop... 35 1.1
UniRef50_UPI00006D0DE1 Cluster: Leucine Rich Repeat family prote... 34 2.0
UniRef50_Q057M6 Cluster: Putative transmembrane protein; n=1; Bu... 34 2.0
UniRef50_Q7RJ09 Cluster: Putative uncharacterized protein PY0345... 34 2.6
UniRef50_Q85G36 Cluster: ORF60; n=1; Cyanidioschyzon merolae|Rep... 33 3.4
UniRef50_A5K8A2 Cluster: Putative uncharacterized protein; n=1; ... 33 3.4
UniRef50_P21421 Cluster: DNA-directed RNA polymerase subunit bet... 33 3.4
UniRef50_Q8IDC8 Cluster: Putative uncharacterized protein PF13_0... 33 4.6
UniRef50_Q8ID18 Cluster: Putative uncharacterized protein MAL13P... 33 4.6
UniRef50_P0C262 Cluster: Putative membrane protein ycf1 C-termin... 33 4.6
UniRef50_Q18AI0 Cluster: Hypothetical phage protein; n=1; Clostr... 33 6.0
>UniRef50_Q5HW36 Cluster: Membrane protein, putative; n=12;
Campylobacter|Rep: Membrane protein, putative -
Campylobacter jejuni (strain RM1221)
Length = 408
Score = 36.3 bits (80), Expect = 0.49
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 98 YCFFLLITKSLMLFIFNNNSRIYANNFYMRKTI 196
+C+FL++ L+ + NN +R +ANN++ K +
Sbjct: 308 FCYFLIVANQLLYYFINNPNRHFANNYHFTKEL 340
>UniRef50_Q7RPX5 Cluster: Putative uncharacterized protein PY01329;
n=18; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY01329 - Plasmodium yoelii yoelii
Length = 5432
Score = 35.5 bits (78), Expect = 0.85
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 238 ISINRQQMDIISTIN-KFNQVNKFQIIYWSFFLINKCKIFMKLILKNLMIFM 390
+ +N + DI IN ++ Q+NKF +I W FL++K + L+ L I M
Sbjct: 5018 VYVNYKSPDIPLAINIQYMQINKFTLIVWCSFLLDKMHMLSDLLRIGLRILM 5069
>UniRef50_Q23FL2 Cluster: Hsp90 protein; n=1; Tetrahymena
thermophila SB210|Rep: Hsp90 protein - Tetrahymena
thermophila SB210
Length = 710
Score = 35.1 bits (77), Expect = 1.1
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +1
Query: 166 CKQFLYEEDNRGIHT*YTQATQYIISINRQQMDIISTI---NKFNQVNKFQIIYWSFFLI 336
C++F ED + I Y+ + IS+N ++ +++ I +KF+ + + +W +
Sbjct: 234 CQEFSKAEDVKKIIQKYSNFINFPISVNGERFNLVQAIWTRSKFSVTEEEYVKFWEYISN 293
Query: 337 NKCKIFMKL 363
K K F KL
Sbjct: 294 QKMKYFAKL 302
>UniRef50_UPI00006D0DE1 Cluster: Leucine Rich Repeat family protein;
n=1; Tetrahymena thermophila SB210|Rep: Leucine Rich
Repeat family protein - Tetrahymena thermophila SB210
Length = 4758
Score = 34.3 bits (75), Expect = 2.0
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +2
Query: 116 ITKSLMLFIFNNNSRIYANNF--YMRKT-IGEFTHDIHRQHNISYL*IDNKWTSF 271
I K+ FIF N + +Y NNF +++K IG F ++++Q+ S I+ K T+F
Sbjct: 1479 IQKNYKNFIFGNEADLYGNNFATFLQKAIIGVFQEELNKQNGDSENIIEYKITAF 1533
>UniRef50_Q057M6 Cluster: Putative transmembrane protein; n=1;
Buchnera aphidicola str. Cc (Cinara cedri)|Rep: Putative
transmembrane protein - Buchnera aphidicola subsp.
Cinara cedri
Length = 529
Score = 34.3 bits (75), Expect = 2.0
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = -2
Query: 354 KYLAFIN*KKTPVNYLKFIYLIKLIYSRNDVHLLSIYRYDILCCLCISCVNSPIV--FLI 181
K + IN K NY+++ LI + S N ++++ I RY + I+ +V I
Sbjct: 361 KLINLINKNKNINNYIEYNSLIFVPDSLNIINIIKILRYSYNNIILINNRYGKVVGILTI 420
Query: 180 *KLFA*IRELLLKINNIKDFVINKKK 103
LF + L INN ++NKKK
Sbjct: 421 KNLFQTVFGNFLDINNTPKIILNKKK 446
>UniRef50_Q7RJ09 Cluster: Putative uncharacterized protein PY03457;
n=1; Plasmodium yoelii yoelii|Rep: Putative
uncharacterized protein PY03457 - Plasmodium yoelii
yoelii
Length = 1249
Score = 33.9 bits (74), Expect = 2.6
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +1
Query: 268 ISTINKFNQVNKFQIIYWSFFLINKCKIFMKLILKNLMIFMRFL 399
I+ +N F N F I F++INK +F LI KNL+I++ L
Sbjct: 786 INNLNYFLYKNIFIPINNHFYMINKILVFSYLINKNLLIYLSLL 829
>UniRef50_Q85G36 Cluster: ORF60; n=1; Cyanidioschyzon merolae|Rep:
ORF60 - Cyanidioschyzon merolae (Red alga)
Length = 60
Score = 33.5 bits (73), Expect = 3.4
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -2
Query: 426 LFLILLNLSKKSHKNHKVF*YQFHKYLAFIN*KKTPVNYLKFIYLI 289
L+ ILL+LS KS KN F Y F K ++ I + N+L +L+
Sbjct: 3 LYKILLHLSLKSFKNQMAFSYCFSKIISPIRFNQIQFNFLPLSFLL 48
>UniRef50_A5K8A2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 5553
Score = 33.5 bits (73), Expect = 3.4
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 238 ISINRQQMDIISTIN-KFNQVNKFQIIYWSFFLINKCKIFMKLILKNLMIFM 390
+ +N + DI IN ++ Q++KF +I W FL++K + L+ L I M
Sbjct: 5143 VYVNYKSPDIPLAINIQYMQIDKFTLIVWCSFLLDKMHMMSDLLRIGLRILM 5194
>UniRef50_P21421 Cluster: DNA-directed RNA polymerase subunit beta;
n=5; Plasmodium|Rep: DNA-directed RNA polymerase subunit
beta - Plasmodium falciparum
Length = 1024
Score = 33.5 bits (73), Expect = 3.4
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 23 LTVVLKFY*LKNITVLLKYT-I*SYKYCFFLLITKSLMLFIFNNN-SRIYANNFYMRKTI 196
LT L Y NI + LKY + YK+ F+ L+L IFN N I NN Y++K I
Sbjct: 379 LTCGLVNYLTTNIFLNLKYLFVIYYKHIFYNRYNFKLLLNIFNKNFYNISFNNIYLKKNI 438
>UniRef50_Q8IDC8 Cluster: Putative uncharacterized protein
PF13_0309; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF13_0309 - Plasmodium
falciparum (isolate 3D7)
Length = 1218
Score = 33.1 bits (72), Expect = 4.6
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = -2
Query: 309 LKFIYLIKLIYSRN--DVHLLSIYRYDILCCLCIS 211
L ++Y IK Y+ + D+H++S Y Y+IL +C+S
Sbjct: 766 LIYVYNIKNEYTNSVEDIHIVSFYHYNILTAVCLS 800
>UniRef50_Q8ID18 Cluster: Putative uncharacterized protein
MAL13P1.349; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL13P1.349 - Plasmodium
falciparum (isolate 3D7)
Length = 2170
Score = 33.1 bits (72), Expect = 4.6
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 89 SYKY-CFFLLITKSLMLFIFNNNSRIYANN-FYMRKTIGEFTHDIHRQHNISYL 244
SYK C+ + SL+ F FN I+ N F++++ I E HD + S+L
Sbjct: 1238 SYKENCYIYIYMLSLLNFFFNKEMNIFEENCFFLKRKIWELLHDQTNLKSNSFL 1291
>UniRef50_P0C262 Cluster: Putative membrane protein ycf1 C-terminal
part; n=1; Piper cenocladum|Rep: Putative membrane
protein ycf1 C-terminal part - Piper cenocladum (Ant
piper)
Length = 1535
Score = 33.1 bits (72), Expect = 4.6
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +1
Query: 184 EEDNRGIHT*YTQATQYIISINRQQMDIISTINKFNQVNKFQIIYWSFFLINKCKIFMKL 363
E+D R I ++I +INR +I N FN NK + Y+ F +++ +F+KL
Sbjct: 821 EKDKRVIDEINQNTIEFISTINRSFSNIT---NIFNNSNKNSLTYFELFSLSQAYVFLKL 877
>UniRef50_Q18AI0 Cluster: Hypothetical phage protein; n=1;
Clostridium difficile 630|Rep: Hypothetical phage
protein - Clostridium difficile (strain 630)
Length = 69
Score = 32.7 bits (71), Expect = 6.0
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = -2
Query: 321 PVNYLKFI--YLIKLIYSRNDVHLLSIYRYDILCCLCISCVNSPIVFLI 181
P Y++F+ ++I +IY + +++ + I RY I C CI + I +LI
Sbjct: 2 PTLYIQFLDYFVIHIIYIKCNIYYMKITRYIITCKKCIKLIMIIIYWLI 50
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,052,572
Number of Sequences: 1657284
Number of extensions: 7365726
Number of successful extensions: 17945
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17918
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37488397230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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