Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30294X
         (562 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    25   0.52 
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   3.7  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   3.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   4.9  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    21   8.5  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +1

Query: 265 IISTINKFNQVN-KFQIIYWSFFLINKCKIFMKLILKNL 378
           ++   + F  ++ K+Q I+  +FL ++ K F+  I KNL
Sbjct: 105 VVKNDDNFRNISEKYQEIFNGYFLNSESKDFIDFIQKNL 143


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 158 RIYANNFYMRKTIGEFTHDIHRQHNISYL 244
           R Y    ++R+  G+F  DI+ + ++S L
Sbjct: 48  REYQLGQFLRERYGDFLGDIYTEESVSAL 76


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 158 RIYANNFYMRKTIGEFTHDIHRQHNISYL 244
           R Y    ++R+  G+F  DI+ + ++S L
Sbjct: 63  REYQLGQFLRERYGDFLGDIYTEESVSAL 91


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 243 RYDILCCLCISCVNSPI 193
           R+   CCLC+  +N+ I
Sbjct: 350 RHSDSCCLCLDSMNAVI 366


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 304 FQIIYWSFFLI 336
           F I+YWSF  I
Sbjct: 459 FNILYWSFIWI 469


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,022
Number of Sequences: 438
Number of extensions: 2432
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)