Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30293X
         (585 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   1.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.3  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   7.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   7.7  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   7.7  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1

Query: 24  FDLNIWCW 1
           F LNIWCW
Sbjct: 129 FVLNIWCW 136


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 127 LQLSCIYHPYCNFL 86
           L L CIYH +C F+
Sbjct: 161 LFLLCIYHFFCAFI 174



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 121 LSCIYHPYCNFL 86
           L CIY+ YC F+
Sbjct: 143 LLCIYYFYCAFI 154


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/39 (23%), Positives = 21/39 (53%)
 Frame = -1

Query: 171 MYSEENKTFFVFRHLYNFPASIILTVTFYVQKAVEIFNL 55
           ++   N  F+ ++   ++  + I+ + FY Q A+E F +
Sbjct: 117 LFVASNCFFWSYQSYMSYIFANIMGLEFYKQFAIEYFQM 155


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/39 (23%), Positives = 21/39 (53%)
 Frame = -1

Query: 171 MYSEENKTFFVFRHLYNFPASIILTVTFYVQKAVEIFNL 55
           ++   N  F+ ++   ++  + I+ + FY Q A+E F +
Sbjct: 117 LFVASNCFFWSYQSYMSYIFANIMGLEFYKQFAIEYFQM 155


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = +1

Query: 166 VHFGD--CGLVHVNGLASFVLVMQTHLKLVTSPQKHSTSNAYTKLVNKT*LLHSMCPC*Q 339
           VH G+   G  H +   S    ++ H+ + T+ +         +   +  L+H  C   +
Sbjct: 212 VHTGERPYGCEHCSMKFSDSNQLKAHVLIHTNEKPFECDKCRGRFRRRHHLVHHKCGGEE 271

Query: 340 QQAQSPIPALR 372
           +  ++P PA+R
Sbjct: 272 EAERAPAPAVR 282


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,262
Number of Sequences: 336
Number of extensions: 2925
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)