Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30292X
         (576 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC101820-1|AAI01821.1|  275|Homo sapiens chromosome 12 open read...    29   8.9  
BC047715-1|AAH47715.1|  338|Homo sapiens C10orf6 protein protein.      29   8.9  
AL138762-3|CAH70950.1| 1173|Homo sapiens chromosome 10 open read...    29   8.9  
AL138762-2|CAH70949.1| 1186|Homo sapiens chromosome 10 open read...    29   8.9  
AL138762-1|CAH70948.1|  758|Homo sapiens chromosome 10 open read...    29   8.9  
AL133215-19|CAI10933.1| 1173|Homo sapiens chromosome 10 open rea...    29   8.9  
AL133215-18|CAI10932.1| 1186|Homo sapiens chromosome 10 open rea...    29   8.9  
AL133215-17|CAI10931.1|  758|Homo sapiens chromosome 10 open rea...    29   8.9  
AK057785-1|BAB71571.1|  275|Homo sapiens protein ( Homo sapiens ...    29   8.9  
AF460991-1|AAN84475.1| 1173|Homo sapiens C10ORF6 protein.              29   8.9  

>BC101820-1|AAI01821.1|  275|Homo sapiens chromosome 12 open reading
           frame 28 protein.
          Length = 275

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +1

Query: 295 IYLLSLKPQTFTAGHRPPPSLAITSGPALL--ACSGSPRT 408
           +Y+LSLK Q     + PP ++  +  PALL  A S +P T
Sbjct: 11  LYILSLKDQDRRVPNLPPSNITSSQEPALLPTASSSAPNT 50


>BC047715-1|AAH47715.1|  338|Homo sapiens C10orf6 protein protein.
          Length = 338

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 517 RTDVAEAETFYSSNRVLEDVGSLGRPHP 434
           +T VAEA+ F +S+R L    SL R HP
Sbjct: 200 QTTVAEADIFNNSSRSLSSRSSLSRHHP 227


>AL138762-3|CAH70950.1| 1173|Homo sapiens chromosome 10 open reading
           frame 6 protein.
          Length = 1173

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 517 RTDVAEAETFYSSNRVLEDVGSLGRPHP 434
           +T VAEA+ F +S+R L    SL R HP
Sbjct: 200 QTTVAEADIFNNSSRSLSSRSSLSRHHP 227


>AL138762-2|CAH70949.1| 1186|Homo sapiens chromosome 10 open reading
           frame 6 protein.
          Length = 1186

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 517 RTDVAEAETFYSSNRVLEDVGSLGRPHP 434
           +T VAEA+ F +S+R L    SL R HP
Sbjct: 200 QTTVAEADIFNNSSRSLSSRSSLSRHHP 227


>AL138762-1|CAH70948.1|  758|Homo sapiens chromosome 10 open reading
           frame 6 protein.
          Length = 758

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 517 RTDVAEAETFYSSNRVLEDVGSLGRPHP 434
           +T VAEA+ F +S+R L    SL R HP
Sbjct: 200 QTTVAEADIFNNSSRSLSSRSSLSRHHP 227


>AL133215-19|CAI10933.1| 1173|Homo sapiens chromosome 10 open
           reading frame 6 protein.
          Length = 1173

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 517 RTDVAEAETFYSSNRVLEDVGSLGRPHP 434
           +T VAEA+ F +S+R L    SL R HP
Sbjct: 200 QTTVAEADIFNNSSRSLSSRSSLSRHHP 227


>AL133215-18|CAI10932.1| 1186|Homo sapiens chromosome 10 open
           reading frame 6 protein.
          Length = 1186

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 517 RTDVAEAETFYSSNRVLEDVGSLGRPHP 434
           +T VAEA+ F +S+R L    SL R HP
Sbjct: 200 QTTVAEADIFNNSSRSLSSRSSLSRHHP 227


>AL133215-17|CAI10931.1|  758|Homo sapiens chromosome 10 open
           reading frame 6 protein.
          Length = 758

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 517 RTDVAEAETFYSSNRVLEDVGSLGRPHP 434
           +T VAEA+ F +S+R L    SL R HP
Sbjct: 200 QTTVAEADIFNNSSRSLSSRSSLSRHHP 227


>AK057785-1|BAB71571.1|  275|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25056 fis, clone CBL04463. ).
          Length = 275

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +1

Query: 295 IYLLSLKPQTFTAGHRPPPSLAITSGPALL--ACSGSPRT 408
           +Y+LSLK Q     + PP ++  +  PALL  A S +P T
Sbjct: 11  LYILSLKDQDRRVPNLPPSNITSSQEPALLPTASSSAPNT 50


>AF460991-1|AAN84475.1| 1173|Homo sapiens C10ORF6 protein.
          Length = 1173

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 517 RTDVAEAETFYSSNRVLEDVGSLGRPHP 434
           +T VAEA+ F +S+R L    SL R HP
Sbjct: 200 QTTVAEADIFNNSSRSLSSRSSLSRHHP 227


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,769,373
Number of Sequences: 237096
Number of extensions: 1318711
Number of successful extensions: 2526
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2526
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)