Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30291
(471 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62888 Cluster: 60S ribosomal protein L30; n=127; Eukar... 117 1e-25
UniRef50_UPI0000E81F40 Cluster: PREDICTED: similar to ribosomal ... 115 6e-25
UniRef50_P58374 Cluster: 60S ribosomal protein L30; n=20; Eukary... 113 2e-24
UniRef50_Q8VZ19 Cluster: 60S ribosomal protein L30-2; n=34; Euka... 99 2e-20
UniRef50_P49153 Cluster: 60S ribosomal protein L30; n=15; Eukary... 91 9e-18
UniRef50_P14120 Cluster: 60S ribosomal protein L30; n=6; Eukaryo... 72 6e-12
UniRef50_Q9XG43 Cluster: 60S ribosomal protein L30; n=1; Guillar... 64 1e-09
UniRef50_A2DH05 Cluster: 60S ribosomal protein L30, putative; n=... 62 5e-09
UniRef50_A0BYD7 Cluster: Chromosome undetermined scaffold_137, w... 58 1e-07
UniRef50_Q7QQS4 Cluster: GLP_24_9208_8879; n=1; Giardia lamblia ... 56 3e-07
UniRef50_O27127 Cluster: 50S ribosomal protein L30e; n=4; Euryar... 55 7e-07
UniRef50_Q8TXJ0 Cluster: 50S ribosomal protein L30e; n=6; Archae... 55 7e-07
UniRef50_A7Q291 Cluster: Chromosome chr13 scaffold_45, whole gen... 54 2e-06
UniRef50_Q8U0M6 Cluster: 50S ribosomal protein L30e; n=3; Pyroco... 53 3e-06
UniRef50_Q980R3 Cluster: 50S ribosomal protein L30e; n=4; Sulfol... 51 1e-05
UniRef50_A4WNA1 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 49 6e-05
UniRef50_Q9YAU3 Cluster: 50S ribosomal protein L30e; n=1; Aeropy... 47 2e-04
UniRef50_Q00T87 Cluster: Chromosome 17 contig 1, DNA sequence; n... 47 2e-04
UniRef50_A7I9N4 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 47 2e-04
UniRef50_Q8ZYQ6 Cluster: 50S ribosomal protein L30e; n=4; Thermo... 45 0.001
UniRef50_O28389 Cluster: 50S ribosomal protein L30e; n=1; Archae... 45 0.001
UniRef50_Q2FPJ8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 44 0.001
UniRef50_A0B560 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 43 0.004
UniRef50_Q8SRU1 Cluster: 60S RIBOSOMAL PROTEIN L30; n=1; Encepha... 42 0.007
UniRef50_Q8PUR3 Cluster: 50S ribosomal protein L30e; n=4; Methan... 41 0.012
UniRef50_P54061 Cluster: 50S ribosomal protein L30e; n=8; Archae... 41 0.016
UniRef50_Q7XYC7 Cluster: Ribosomal protein L30; n=1; Triticum ae... 40 0.036
UniRef50_Q0W8G7 Cluster: 50S ribosomal protein L30E; n=1; uncult... 40 0.036
UniRef50_A4GI98 Cluster: Ribosomal protein L30e; n=1; uncultured... 39 0.064
UniRef50_A2SQE2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 38 0.11
UniRef50_Q835U9 Cluster: Ribosomal protein L7A family; n=2; Lact... 35 0.78
UniRef50_Q97S58 Cluster: Ribosomal protein L7A family; n=43; Lac... 35 1.0
UniRef50_A3DE45 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 35 1.0
UniRef50_Q2RJM6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 34 1.8
UniRef50_Q18BH0 Cluster: Putative ribosomal protein precursor; n... 34 1.8
UniRef50_Q3LWG3 Cluster: Ribosomal protein L30; n=1; Bigelowiell... 33 2.4
UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor... 33 2.4
UniRef50_Q190U6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 33 3.2
UniRef50_A6W8L6 Cluster: Type III secretion exporter; n=1; Kineo... 33 3.2
UniRef50_Q41A26 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 33 4.2
UniRef50_P55858 Cluster: 50S ribosomal protein L7Ae; n=44; Archa... 33 4.2
UniRef50_Q1FIZ9 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 32 7.3
UniRef50_O30426 Cluster: Xylanase; n=2; Caldicellulosiruptor sac... 32 7.3
UniRef50_P34667 Cluster: Uncharacterized protein ZK686.1; n=1; C... 32 7.3
UniRef50_Q8ZTA5 Cluster: 50S ribosomal protein L7Ae; n=7; Archae... 32 7.3
UniRef50_P80341 Cluster: 50S ribosomal protein L35; n=5; Deinoco... 32 7.3
UniRef50_UPI0000DB701B Cluster: PREDICTED: similar to CG11847-PA... 31 9.7
UniRef50_A5ISF2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 31 9.7
UniRef50_Q6CN40 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 31 9.7
UniRef50_Q5KA50 Cluster: Expressed protein; n=1; Filobasidiella ... 31 9.7
UniRef50_Q74MP1 Cluster: NEQ179; n=1; Nanoarchaeum equitans|Rep:... 31 9.7
>UniRef50_P62888 Cluster: 60S ribosomal protein L30; n=127;
Eukaryota|Rep: 60S ribosomal protein L30 - Homo sapiens
(Human)
Length = 115
Score = 117 bits (282), Expect = 1e-25
Identities = 51/59 (86%), Positives = 55/59 (93%)
Frame = +2
Query: 242 CSSARKSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 418
C + RKSEIEYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 52 CPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 110
Score = 90.6 bits (215), Expect = 1e-17
Identities = 44/55 (80%), Positives = 48/55 (87%)
Frame = +3
Query: 90 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPL 254
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P L
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPAL 55
>UniRef50_UPI0000E81F40 Cluster: PREDICTED: similar to ribosomal
protein L30; n=1; Gallus gallus|Rep: PREDICTED: similar
to ribosomal protein L30 - Gallus gallus
Length = 131
Score = 115 bits (276), Expect = 6e-25
Identities = 52/69 (75%), Positives = 58/69 (84%)
Frame = +2
Query: 212 QSKAGYHR*KCSSARKSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGD 391
+S Y + + RKSEIEYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGD
Sbjct: 58 RSNCQYFNTQFLNLRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGD 117
Query: 392 SDIITTLPE 418
SDII ++PE
Sbjct: 118 SDIIRSMPE 126
>UniRef50_P58374 Cluster: 60S ribosomal protein L30; n=20;
Eukaryota|Rep: 60S ribosomal protein L30 - Branchiostoma
belcheri (Amphioxus)
Length = 114
Score = 113 bits (271), Expect = 2e-24
Identities = 49/54 (90%), Positives = 53/54 (98%)
Frame = +2
Query: 254 RKSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLP 415
RKSEIEYYA+LAKTGVHHYSGNNIELGTACGKY+RVCTLAITDPGDSDII ++P
Sbjct: 53 RKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYFRVCTLAITDPGDSDIIRSMP 106
Score = 80.2 bits (189), Expect = 2e-14
Identities = 38/51 (74%), Positives = 44/51 (86%)
Frame = +3
Query: 102 KKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPL 254
K+++KT+ESINSRL LVMKSGKY LG K+TLK LRQGKAKL+IIA N P L
Sbjct: 2 KQKRKTMESINSRLQLVMKSGKYVLGLKETLKVLRQGKAKLIIIANNTPAL 52
>UniRef50_Q8VZ19 Cluster: 60S ribosomal protein L30-2; n=34;
Eukaryota|Rep: 60S ribosomal protein L30-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 112
Score = 99 bits (238), Expect = 2e-20
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = +2
Query: 242 CSSARKSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLP 415
C R+SEIEYYA+LAK GVHHY+GNN++LGTACGKY+RV L+I DPGDSDII ++P
Sbjct: 52 CPPLRRSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIP 109
Score = 77.4 bits (182), Expect = 1e-13
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = +3
Query: 90 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPL 254
MV KK KK+ E INSRLALVMKSGKY LGYK LK+LR K KL++I+ N PPL
Sbjct: 1 MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPL 55
>UniRef50_P49153 Cluster: 60S ribosomal protein L30; n=15;
Eukaryota|Rep: 60S ribosomal protein L30 - Trypanosoma
brucei brucei
Length = 105
Score = 91.5 bits (217), Expect = 9e-18
Identities = 41/80 (51%), Positives = 54/80 (67%)
Frame = +2
Query: 161 GKILLRIQANFENSSTRQSKAGYHR*KCSSARKSEIEYYALLAKTGVHHYSGNNIELGTA 340
GK +L Q + + +SK C RK+EIEYY L+KT +HHYSGNN++LGTA
Sbjct: 23 GKYVLGTQQSLKTLRQGRSKLVVISANCPPIRKAEIEYYCTLSKTPIHHYSGNNLDLGTA 82
Query: 341 CGKYYRVCTLAITDPGDSDI 400
CG+++R C L+ITD GDSDI
Sbjct: 83 CGRHFRACVLSITDVGDSDI 102
Score = 72.1 bits (169), Expect = 6e-12
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = +3
Query: 99 AKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPL 254
AKK K +++IN+++ LVMKSGKY LG +Q+LKTLRQG++KLV+I+ N PP+
Sbjct: 2 AKKVKSKVDTINTKIQLVMKSGKYVLGTQQSLKTLRQGRSKLVVISANCPPI 53
>UniRef50_P14120 Cluster: 60S ribosomal protein L30; n=6;
Eukaryota|Rep: 60S ribosomal protein L30 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 105
Score = 72.1 bits (169), Expect = 6e-12
Identities = 32/53 (60%), Positives = 43/53 (81%)
Frame = +2
Query: 254 RKSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTL 412
RKSE+EYYA+L+KT V+++ G N ELGTA GK +RV ++I + GDSDI+TTL
Sbjct: 52 RKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRVGVVSILEAGDSDILTTL 104
Score = 70.5 bits (165), Expect = 2e-11
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +3
Query: 114 KTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPL 254
K+ ESIN +LALV+KSGKY LGYK T+K+LRQGK+KL+IIA N P L
Sbjct: 5 KSQESINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANTPVL 51
>UniRef50_Q9XG43 Cluster: 60S ribosomal protein L30; n=1; Guillardia
theta|Rep: 60S ribosomal protein L30 - Guillardia theta
(Cryptomonas phi)
Length = 107
Score = 64.1 bits (149), Expect = 1e-09
Identities = 31/77 (40%), Positives = 43/77 (55%)
Frame = +2
Query: 161 GKILLRIQANFENSSTRQSKAGYHR*KCSSARKSEIEYYALLAKTGVHHYSGNNIELGTA 340
GK +A +N + + K C RK E+EYYA+L K VHH+ GNN++LG +
Sbjct: 24 GKFSYGYKATLKNLRSGKCKMIIITDNCIPLRKLELEYYAMLNKCHVHHFYGNNVDLGLS 83
Query: 341 CGKYYRVCTLAITDPGD 391
CGK Y L IT+ G+
Sbjct: 84 CGKSYGCSCLGITESGE 100
Score = 60.5 bits (140), Expect = 2e-08
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +3
Query: 105 KQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLGNLRL 269
K K T E ++S+L +++K+GK+ GYK TLK LR GK K++II N PL L L
Sbjct: 5 KNKSTSELLSSKLKIIIKTGKFSYGYKATLKNLRSGKCKMIIITDNCIPLRKLEL 59
>UniRef50_A2DH05 Cluster: 60S ribosomal protein L30, putative; n=5;
Eukaryota|Rep: 60S ribosomal protein L30, putative -
Trichomonas vaginalis G3
Length = 112
Score = 62.5 bits (145), Expect = 5e-09
Identities = 29/86 (33%), Positives = 50/86 (58%)
Frame = +2
Query: 161 GKILLRIQANFENSSTRQSKAGYHR*KCSSARKSEIEYYALLAKTGVHHYSGNNIELGTA 340
GK L I ++ ++K + A +S IEYYA+L+ + + G+N++LGTA
Sbjct: 24 GKYSLGISQTLKSLRNGEAKLVIFASNVAPAHRSLIEYYAMLSGCDILPFDGDNVDLGTA 83
Query: 341 CGKYYRVCTLAITDPGDSDIITTLPE 418
CGKY+R ++I D G+S+I+ + +
Sbjct: 84 CGKYFRSSVISIIDAGESEILKMIKQ 109
Score = 59.3 bits (137), Expect = 4e-08
Identities = 30/50 (60%), Positives = 35/50 (70%)
Frame = +3
Query: 102 KKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPP 251
KK + ESI + L+LV KSGKY LG QTLK+LR G+AKLVI A N P
Sbjct: 4 KKLSRARESIINSLSLVTKSGKYSLGISQTLKSLRNGEAKLVIFASNVAP 53
>UniRef50_A0BYD7 Cluster: Chromosome undetermined scaffold_137,
whole genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_137,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 201
Score = 58.0 bits (134), Expect = 1e-07
Identities = 25/44 (56%), Positives = 33/44 (75%)
Frame = +3
Query: 123 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPL 254
ES+N +L LV++SGK +GYKQTLK +R G AKLV I+ N P +
Sbjct: 8 ESVNQKLQLVVRSGKITMGYKQTLKAIRNGTAKLVFISNNCPTI 51
Score = 45.6 bits (103), Expect = 6e-04
Identities = 27/81 (33%), Positives = 41/81 (50%)
Frame = +2
Query: 161 GKILLRIQANFENSSTRQSKAGYHR*KCSSARKSEIEYYALLAKTGVHHYSGNNIELGTA 340
GKI + + + +K + C + RK++IEYYA+LA+ + Y GNN++LGT
Sbjct: 21 GKITMGYKQTLKAIRNGTAKLVFISNNCPTIRKTQIEYYAMLAQITIVLYQGNNVDLGT- 79
Query: 341 CGKYYRVCTLAITDPGDSDII 403
G + I G SD I
Sbjct: 80 -GVIWEAQLFLIEFMGMSDFI 99
>UniRef50_Q7QQS4 Cluster: GLP_24_9208_8879; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_24_9208_8879 - Giardia lamblia ATCC
50803
Length = 109
Score = 56.4 bits (130), Expect = 3e-07
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +3
Query: 111 KKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPL 254
KK +SI+ L LV+KSGKY LG Q ++ +R GKA+LV +A N PPL
Sbjct: 8 KKAQDSISLTLTLVVKSGKYTLGTDQAIRNIRDGKAQLVFMANNCPPL 55
Score = 46.8 bits (106), Expect = 2e-04
Identities = 24/84 (28%), Positives = 43/84 (51%)
Frame = +2
Query: 161 GKILLRIQANFENSSTRQSKAGYHR*KCSSARKSEIEYYALLAKTGVHHYSGNNIELGTA 340
GK L N +++ + C KS+++Y L+KT V ++G++ ELG A
Sbjct: 25 GKYTLGTDQAIRNIRDGKAQLVFMANNCPPLVKSQVDYLCHLSKTPVRVFAGSSRELGIA 84
Query: 341 CGKYYRVCTLAITDPGDSDIITTL 412
G+ + V + I + GD+D+ + L
Sbjct: 85 VGRQFNVSIMTILEAGDADLTSIL 108
>UniRef50_O27127 Cluster: 50S ribosomal protein L30e; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L30e -
Methanobacterium thermoautotrophicum
Length = 98
Score = 55.2 bits (127), Expect = 7e-07
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +2
Query: 257 KSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 403
K +IEYYA L++ V+ + G ++ELG+ CGK + V L I DPGDS I+
Sbjct: 46 KEDIEYYAKLSEIPVYTHEGTSVELGSVCGKPFTVGALLIQDPGDSTIL 94
Score = 36.3 bits (80), Expect = 0.34
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +3
Query: 129 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
I+ + + + +G LG K+T+++L+ GK KLV++A N P
Sbjct: 3 IDRGIRVAVDTGNVILGSKRTIQSLKLGKGKLVVMASNIP 42
>UniRef50_Q8TXJ0 Cluster: 50S ribosomal protein L30e; n=6;
Archaea|Rep: 50S ribosomal protein L30e - Methanopyrus
kandleri
Length = 109
Score = 55.2 bits (127), Expect = 7e-07
Identities = 24/60 (40%), Positives = 39/60 (65%)
Frame = +2
Query: 242 CSSARKSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEA 421
C + + +IEYYA LA V Y G +++LG CG+ + V ++A+ D G+SD+I T+ +A
Sbjct: 42 CPAEIREDIEYYAELADVPVFVYPGTSMDLGDVCGRPHVVASMAVLDDGESDLIATVRKA 101
Score = 40.3 bits (90), Expect = 0.021
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +3
Query: 120 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
++ I ++ + +++G LG QT+K L+ GK KLVI+A N P
Sbjct: 1 MQEIERQIRMAVETGDVVLGSNQTIKLLKLGKPKLVIVAANCP 43
>UniRef50_A7Q291 Cluster: Chromosome chr13 scaffold_45, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_45, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 49
Score = 53.6 bits (123), Expect = 2e-06
Identities = 21/33 (63%), Positives = 28/33 (84%)
Frame = +2
Query: 317 NNIELGTACGKYYRVCTLAITDPGDSDIITTLP 415
+N++LGTACGKY++V L+I DPGDSDII +P
Sbjct: 14 DNVDLGTACGKYFQVSCLSIVDPGDSDIIKQMP 46
>UniRef50_Q8U0M6 Cluster: 50S ribosomal protein L30e; n=3;
Pyrococcus|Rep: 50S ribosomal protein L30e - Pyrococcus
furiosus
Length = 99
Score = 53.2 bits (122), Expect = 3e-06
Identities = 29/83 (34%), Positives = 43/83 (51%)
Frame = +2
Query: 155 EIGKILLRIQANFENSSTRQSKAGYHR*KCSSARKSEIEYYALLAKTGVHHYSGNNIELG 334
E GK++L + T +K K +I YYA L+ V+ + G ++ELG
Sbjct: 12 ETGKVVLGSNETIRLAKTGGAKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEFEGTSVELG 71
Query: 335 TACGKYYRVCTLAITDPGDSDII 403
T GK + V +LAI DPG+S I+
Sbjct: 72 TLLGKPFVVASLAIVDPGESKIL 94
Score = 39.5 bits (88), Expect = 0.036
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +3
Query: 141 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
L M++GK LG +T++ + G AKL+I+AKNAP
Sbjct: 7 LRKAMETGKVVLGSNETIRLAKTGGAKLIIVAKNAP 42
>UniRef50_Q980R3 Cluster: 50S ribosomal protein L30e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L30e -
Sulfolobus solfataricus
Length = 108
Score = 51.2 bits (117), Expect = 1e-05
Identities = 22/54 (40%), Positives = 34/54 (62%)
Frame = +2
Query: 257 KSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 418
K +I +YA L+ V+ Y G+ +LGT CGK + + T++I D GDS I+ + E
Sbjct: 54 KQDIMHYAKLSNIPVYEYKGSGWDLGTLCGKPFMISTISIIDEGDSKILDIIKE 107
>UniRef50_A4WNA1 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Pyrobaculum arsenaticum DSM 13514|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Pyrobaculum arsenaticum
(strain DSM 13514 / JCM 11321)
Length = 104
Score = 48.8 bits (111), Expect = 6e-05
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = +2
Query: 257 KSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 403
K +IEYYA LA + + G++IELG A + +++ LA+ DPG S+I+
Sbjct: 50 KDDIEYYAKLAGIPIFVFPGSSIELGAAAKRPHKIMALAVIDPGQSEIL 98
Score = 35.5 bits (78), Expect = 0.59
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 129 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
I L + + +G +G+++T + L G KLVIIA NAP
Sbjct: 7 IGRELQVAINTGSVVIGFEETRRALLAGTPKLVIIAANAP 46
>UniRef50_Q9YAU3 Cluster: 50S ribosomal protein L30e; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L30e - Aeropyrum
pernix
Length = 100
Score = 47.2 bits (107), Expect = 2e-04
Identities = 18/42 (42%), Positives = 31/42 (73%)
Frame = +3
Query: 126 SINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPP 251
S+ L ++K+G Y +G+KQ+LK ++ G+AK ++IA+N PP
Sbjct: 2 SVEKALKDLVKTGVYAMGFKQSLKAVKAGEAKAIVIAENTPP 43
Score = 39.9 bits (89), Expect = 0.028
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 257 KSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEA 421
+ ++EYYA LA + Y G +++G G+ + V LA+ D G S I+ EA
Sbjct: 46 RRKLEYYAKLAGIPIIVYRGTRMDMGLVMGRRHGVSVLAVIDEGSSRILEQAEEA 100
>UniRef50_Q00T87 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 170
Score = 46.8 bits (106), Expect = 2e-04
Identities = 42/126 (33%), Positives = 55/126 (43%), Gaps = 21/126 (16%)
Frame = -3
Query: 400 NVRVTRVCDGECAHSVVFSACCS*FNVV-------------------PAVVVNTCLS*EG 278
++ VTRV DG+ H+VV +A S +VV P + G
Sbjct: 40 DIGVTRVRDGQARHAVVSTARRSQVDVVCERNNTKHPSGFHPTPDASPRAFSASSTRTSG 99
Query: 277 VVFNLRFPSGGAFLAMITSFALPCRRVFKVCLYPKQYFPDFITKARRELIDSMVFF--CF 104
VV + R A+ T+ P R+VF V LYP Y PD +T REL+ S FF CF
Sbjct: 100 VVMHPRLGQHRVLFAINTNLLAPLRKVFSVDLYPSVYRPDRMTIVSRELMPSAAFFEPCF 159
Query: 103 FAATIL 86
A L
Sbjct: 160 GAIFFL 165
>UniRef50_A7I9N4 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Candidatus Methanoregula boonei 6A8|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanoregula boonei
(strain 6A8)
Length = 97
Score = 46.8 bits (106), Expect = 2e-04
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +2
Query: 299 VHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIIT 406
+H + G+++ LG ACGK + V TLAI PG+SDI++
Sbjct: 57 IHTFEGSSVALGKACGKPFMVSTLAIVSPGESDILS 92
Score = 37.5 bits (83), Expect = 0.15
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 132 NSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
N+ L +K+G LG T K +++GKA++V+IA N P
Sbjct: 4 NASLRRAIKTGDVILGQNNTEKCIKEGKAQMVVIAANCP 42
>UniRef50_Q8ZYQ6 Cluster: 50S ribosomal protein L30e; n=4;
Thermoproteaceae|Rep: 50S ribosomal protein L30e -
Pyrobaculum aerophilum
Length = 102
Score = 44.8 bits (101), Expect = 0.001
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +2
Query: 257 KSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 403
+ +IEYYA LA + + G++IELG A + +++ LA+ D G S+I+
Sbjct: 47 RDDIEYYAKLAGVPIFVFPGSSIELGAAAKRPHKIMALAVIDAGQSEIL 95
Score = 37.9 bits (84), Expect = 0.11
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 129 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
I+ L + + +GK +G+++T K L G KL+I+A NAP
Sbjct: 4 ISRELQVAINTGKVVIGFEETKKALLTGAPKLIILAANAP 43
>UniRef50_O28389 Cluster: 50S ribosomal protein L30e; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L30e -
Archaeoglobus fulgidus
Length = 86
Score = 44.8 bits (101), Expect = 0.001
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +3
Query: 129 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
+ + + V+K+G Y LG K TLK+LR G+AK VI+A N P
Sbjct: 4 VETIIKTVLKTGGYRLGSKSTLKSLRNGEAKAVIVASNCP 43
Score = 34.3 bits (75), Expect = 1.4
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 308 YSGNNIELGTACGKYYRVCTLAITD 382
Y+G N+ELG CGK + V +AIT+
Sbjct: 60 YNGTNMELGALCGKPFSVAAMAITE 84
>UniRef50_Q2FPJ8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanospirillum hungatei JF-1|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanospirillum
hungatei (strain JF-1 / DSM 864)
Length = 95
Score = 44.4 bits (100), Expect = 0.001
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +2
Query: 281 LLAKTGV--HHYSGNNIELGTACGKYYRVCTLAITDPGDSDIIT 406
L K GV + Y G+ ++LG ACGK + V LAI + GDSDI+T
Sbjct: 49 LSGKDGVKTYTYEGSGVQLGRACGKPFIVSALAIEESGDSDILT 92
Score = 38.3 bits (85), Expect = 0.084
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 132 NSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
N+ L +K+GK LG +T ++ +G AKLV++A N P
Sbjct: 4 NTSLRRAIKTGKVILGQNETKDSIEKGSAKLVVVAANCP 42
>UniRef50_A0B560 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanosaeta thermophila PT|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Methanosaeta thermophila (strain
DSM 6194 / PT) (Methanothrixthermophila (strain DSM 6194
/ PT))
Length = 103
Score = 42.7 bits (96), Expect = 0.004
Identities = 24/86 (27%), Positives = 43/86 (50%)
Frame = +2
Query: 161 GKILLRIQANFENSSTRQSKAGYHR*KCSSARKSEIEYYALLAKTGVHHYSGNNIELGTA 340
GK++L ++ E+ +K + C + ++ + V+ Y + +LG A
Sbjct: 15 GKVVLGSNSSLEHGLRGDAKLIIYASDCPEHVRQKLRSL----EVPVYAYQSSGRDLGAA 70
Query: 341 CGKYYRVCTLAITDPGDSDIITTLPE 418
CGK + V LA+ +PGDS+I+ L E
Sbjct: 71 CGKPFPVAALAVIEPGDSEIMALLRE 96
>UniRef50_Q8SRU1 Cluster: 60S RIBOSOMAL PROTEIN L30; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L30
- Encephalitozoon cuniculi
Length = 108
Score = 41.9 bits (94), Expect = 0.007
Identities = 16/42 (38%), Positives = 30/42 (71%)
Frame = +3
Query: 123 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
+++ S L L M++GKY +G+K+ +K++ KAK ++I+ N P
Sbjct: 9 DNVTSSLLLAMRTGKYIVGFKRAIKSVIMKKAKCLVISSNFP 50
Score = 35.1 bits (77), Expect = 0.78
Identities = 17/53 (32%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +2
Query: 248 SARKSEIEYYALLAK-TGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 403
S ++ +EYY++LA + +S NN ELG+ + +R+ ++I D G++++I
Sbjct: 51 STKRKLLEYYSVLAGGLPIIFHSANNEELGSITERGHRLGCISIIDQGEAELI 103
>UniRef50_Q8PUR3 Cluster: 50S ribosomal protein L30e; n=4;
Methanosarcinaceae|Rep: 50S ribosomal protein L30e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 103
Score = 41.1 bits (92), Expect = 0.012
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 299 VHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 403
V Y G ++ELG CGK + + +AI D G+SDI+
Sbjct: 65 VLEYEGTSVELGPVCGKPFTIAAMAILDAGESDIL 99
Score = 34.3 bits (75), Expect = 1.4
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 126 SINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
+++ L +K+GK +G +T+ G AK+V++A N P
Sbjct: 11 NVDKSLIKAVKTGKVIIGANRTVDAAENGSAKMVVLASNCP 51
>UniRef50_P54061 Cluster: 50S ribosomal protein L30e; n=8;
Archaea|Rep: 50S ribosomal protein L30e - Methanococcus
jannaschii
Length = 110
Score = 40.7 bits (91), Expect = 0.016
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +2
Query: 257 KSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 403
+ +++YYA L+ V+ + ++ELG CGK + V L + D G S+I+
Sbjct: 52 EEDVKYYAKLSNIPVYQHKITSLELGAVCGKPFPVAALLVLDEGLSNIM 100
Score = 37.9 bits (84), Expect = 0.11
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +3
Query: 129 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
+N + + +GK LG K+T+K ++ G+ KLV++A N P
Sbjct: 9 VNKAIRTAVDTGKVILGSKRTIKFVKHGEGKLVVLAGNIP 48
>UniRef50_Q7XYC7 Cluster: Ribosomal protein L30; n=1; Triticum
aestivum|Rep: Ribosomal protein L30 - Triticum aestivum
(Wheat)
Length = 75
Score = 39.5 bits (88), Expect = 0.036
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +3
Query: 108 QKKTIESINSRLALVMKSGKYCLGYKQTLK 197
+++ +IN++L LVMKSGKY LGYK LK
Sbjct: 24 RRRARRNINNKLQLVMKSGKYTLGYKTVLK 53
>UniRef50_Q0W8G7 Cluster: 50S ribosomal protein L30E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L30E - Uncultured methanogenic archaeon RC-I
Length = 101
Score = 39.5 bits (88), Expect = 0.036
Identities = 23/81 (28%), Positives = 40/81 (49%)
Frame = +2
Query: 161 GKILLRIQANFENSSTRQSKAGYHR*KCSSARKSEIEYYALLAKTGVHHYSGNNIELGTA 340
GK+L+ + + S +K C K +I+ A ++ + G +++LG
Sbjct: 16 GKVLIGTKQAVKASQRGVAKLVIVATNCPGDVKKQIKE----ANIPMYEFPGMSVDLGPI 71
Query: 341 CGKYYRVCTLAITDPGDSDII 403
CGK Y V + + +PGDSDI+
Sbjct: 72 CGKPYVVSAVTVLEPGDSDIM 92
Score = 38.7 bits (86), Expect = 0.064
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +3
Query: 129 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
++ L V+++GK +G KQ +K ++G AKLVI+A N P
Sbjct: 5 LDKSLRSVVRTGKVLIGTKQAVKASQRGVAKLVIVATNCP 44
>UniRef50_A4GI98 Cluster: Ribosomal protein L30e; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein L30e
- uncultured marine bacterium HF10_29C11
Length = 99
Score = 38.7 bits (86), Expect = 0.064
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 299 VHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 403
VH N ELG ACGK + + T+ + D GDSD++
Sbjct: 58 VHQAPVVNRELGVACGKPFSISTICVLDAGDSDLL 92
Score = 31.5 bits (68), Expect = 9.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 129 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
++ +L + +G G +QTL +G A+LV++A N P
Sbjct: 3 LSRQLKTAIATGSLLFGQRQTLDACARGDARLVLLAANCP 42
>UniRef50_A2SQE2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanocorpusculum labreanum Z|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
Length = 96
Score = 37.9 bits (84), Expect = 0.11
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 132 NSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
N L MK+G+ LG K + + KA+LVIIAKNAP
Sbjct: 4 NLSLRRAMKTGEVTLGQNSVEKIVAENKAELVIIAKNAP 42
Score = 34.7 bits (76), Expect = 1.0
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = +2
Query: 299 VHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 418
++ + G++ +LG CG+ + + LAI + G+SDI++ E
Sbjct: 57 LYEFDGSSRQLGKECGRDHMISVLAIVNAGESDILSLKSE 96
>UniRef50_Q835U9 Cluster: Ribosomal protein L7A family; n=2;
Lactobacillales|Rep: Ribosomal protein L7A family -
Enterococcus faecalis (Streptococcus faecalis)
Length = 101
Score = 35.1 bits (77), Expect = 0.78
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +3
Query: 141 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNA 245
L L M++GK G + TLK +R KAK V +A++A
Sbjct: 11 LGLAMRAGKLVTGEELTLKDIRANKAKFVFVAQDA 45
>UniRef50_Q97S58 Cluster: Ribosomal protein L7A family; n=43;
Lactobacillales|Rep: Ribosomal protein L7A family -
Streptococcus pneumoniae
Length = 99
Score = 34.7 bits (76), Expect = 1.0
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +3
Query: 123 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPP 251
+ I++ L L ++G+ G + +K ++ GKAKLV +A +A P
Sbjct: 4 QKISNLLGLAQRAGRIISGEELVVKAIQDGKAKLVFLAHDAGP 46
>UniRef50_A3DE45 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=3; Clostridiales|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Clostridium thermocellum (strain
ATCC 27405 / DSM 1237)
Length = 117
Score = 34.7 bits (76), Expect = 1.0
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 129 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNA 245
I S L L K+ K GY+ + L+ GKA+LVI+A++A
Sbjct: 6 IYSFLGLARKANKLAAGYESCERLLKAGKAELVIVAEDA 44
>UniRef50_Q2RJM6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Moorella thermoacetica ATCC 39073|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Moorella thermoacetica
(strain ATCC 39073)
Length = 102
Score = 33.9 bits (74), Expect = 1.8
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 120 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPP 251
+ +I S L L ++GK GY+ + LR K +LV++A++ P
Sbjct: 1 MNNIYSLLGLAYRAGKIVWGYQAVVAALRSQKVELVLLARDGSP 44
>UniRef50_Q18BH0 Cluster: Putative ribosomal protein precursor; n=1;
Clostridium difficile 630|Rep: Putative ribosomal
protein precursor - Clostridium difficile (strain 630)
Length = 103
Score = 33.9 bits (74), Expect = 1.8
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 111 KKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNA 245
K E + S L L ++GK G TL L++GK L++IA++A
Sbjct: 2 KNNKEKVLSFLGLATRAGKIVSGDDSTLLDLKKGKVNLILIAEDA 46
>UniRef50_Q3LWG3 Cluster: Ribosomal protein L30; n=1; Bigelowiella
natans|Rep: Ribosomal protein L30 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 102
Score = 33.5 bits (73), Expect = 2.4
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2
Query: 242 CSSARKSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAI 376
C K I +Y LL K +SGN+ ELG C ++ C L I
Sbjct: 55 CLIDTKLHIFHYCLLYKVKFCFFSGNSKELGQLCDLKHKACILGI 99
>UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=137; Eukaryota|Rep: Eukaryotic peptide
chain release factor subunit 1 - Homo sapiens (Human)
Length = 437
Score = 33.5 bits (73), Expect = 2.4
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 159 SGKYCLGYKQTLKTLRQGKAKLVIIAKN 242
+GKYC G + TLK L G +++I+ +N
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYEN 325
>UniRef50_Q190U6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=2; Desulfitobacterium hafniense|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Desulfitobacterium hafniense
(strain DCB-2)
Length = 98
Score = 33.1 bits (72), Expect = 3.2
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 120 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
+E I S L L ++GK G Q L++GK L+I+A++AP
Sbjct: 2 LERIYSLLGLARRAGKITSGESQIEVMLKKGKGFLLILAEDAP 44
>UniRef50_A6W8L6 Cluster: Type III secretion exporter; n=1;
Kineococcus radiotolerans SRS30216|Rep: Type III
secretion exporter - Kineococcus radiotolerans SRS30216
Length = 360
Score = 33.1 bits (72), Expect = 3.2
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 120 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNA 245
I ++ L L++ +G Y + Y++T+K LR K + + KNA
Sbjct: 187 IVAVTVLLGLIIAAGDYAMSYRRTMKKLRMSKQDIKMEHKNA 228
>UniRef50_Q41A26 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Exiguobacterium sibiricum 255-15|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Exiguobacterium
sibiricum 255-15
Length = 96
Score = 32.7 bits (71), Expect = 4.2
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3
Query: 174 LGYKQTLKTLRQGKAKLVIIAKNA 245
+G KQTLK LR GKA VIIA +A
Sbjct: 27 VGQKQTLKALRSGKASEVIIADDA 50
>UniRef50_P55858 Cluster: 50S ribosomal protein L7Ae; n=44;
Archaea|Rep: 50S ribosomal protein L7Ae - Sulfolobus
solfataricus
Length = 127
Score = 32.7 bits (71), Expect = 4.2
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 156 KSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPP 251
+SGK G +T K + +G+AKLVIIA++ P
Sbjct: 28 ESGKIKKGTNETTKAVERGQAKLVIIAEDVQP 59
>UniRef50_Q1FIZ9 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=3; Clostridiales|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Clostridium phytofermentans ISDg
Length = 115
Score = 31.9 bits (69), Expect = 7.3
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 105 KQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNA 245
K T + + S L L K+G G T K++++GKA +VI+A++A
Sbjct: 8 KAAATKKRVMSLLGLATKAGYVASGEFSTEKSVKEGKACVVIVAEDA 54
>UniRef50_O30426 Cluster: Xylanase; n=2; Caldicellulosiruptor
saccharolyticus|Rep: Xylanase - Caldocellum
saccharolyticum (Caldicellulosiruptor saccharolyticus)
Length = 1347
Score = 31.9 bits (69), Expect = 7.3
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +2
Query: 140 PCFGDEIGKILLRI----QANFENSSTRQSKAGYHR*KCSSARKSEIEYYALLAKTGVHH 307
P FGDE GK+ L+ Q++FE + S Y S+ R+ E++ A + K V
Sbjct: 321 PVFGDEKGKVPLKFVKPGQSSFETEVVK-SDEFYQEKAESNPRRFEVKRNAEITK-DVEL 378
Query: 308 YSGNNIELGTACGKYYRVCTLAITDPGDSDII 403
NN GT K L + G+ +II
Sbjct: 379 VINNNFPRGTIGWKGREGAKLEVVSEGNKNII 410
>UniRef50_P34667 Cluster: Uncharacterized protein ZK686.1; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
ZK686.1 - Caenorhabditis elegans
Length = 44
Score = 31.9 bits (69), Expect = 7.3
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +3
Query: 147 LVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKN 242
+VMK+G+Y L Y+Q LK+L AKLVI K+
Sbjct: 1 MVMKTGQYVL-YEQKLKSLLNENAKLVINTKH 31
>UniRef50_Q8ZTA5 Cluster: 50S ribosomal protein L7Ae; n=7;
Archaea|Rep: 50S ribosomal protein L7Ae - Pyrobaculum
aerophilum
Length = 151
Score = 31.9 bits (69), Expect = 7.3
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 141 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPP 251
L++ ++GK G +T K + +G AKLV+IA++ P
Sbjct: 38 LSIARQTGKIKKGTNETTKAVERGLAKLVLIAEDVDP 74
>UniRef50_P80341 Cluster: 50S ribosomal protein L35; n=5;
Deinococci|Rep: 50S ribosomal protein L35 - Thermus
thermophilus
Length = 65
Score = 31.9 bits (69), Expect = 7.3
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 84 PKMVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAK 239
PKM K KK ++ S + MK+GK L ++++ K +RQ K + ++AK
Sbjct: 2 PKMKTHKGAKKRVKITASGKVVAMKTGKRHLNWQKSGKEIRQ-KGRKFVLAK 52
>UniRef50_UPI0000DB701B Cluster: PREDICTED: similar to CG11847-PA
isoform 1; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG11847-PA isoform 1 - Apis mellifera
Length = 929
Score = 31.5 bits (68), Expect = 9.7
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +3
Query: 78 YAPKMVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQ 209
Y K AAKKQ+KTIES + L K K L QT+ ++ +
Sbjct: 422 YNQKRSAAKKQQKTIESQDKALKSAEKKTKQTLKEVQTIHSINK 465
>UniRef50_A5ISF2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=16; Staphylococcus|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Staphylococcus aureus subsp.
aureus JH9
Length = 105
Score = 31.5 bits (68), Expect = 9.7
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +3
Query: 117 TIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNA 245
+I+ I + L L M++GK G + +++G KLVI+A +A
Sbjct: 2 SIDQILNFLGLAMRAGKVKTGESVIVNEIKKGNLKLVIVANDA 44
>UniRef50_Q6CN40 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome E of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 442
Score = 31.5 bits (68), Expect = 9.7
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 RQGKAKLVIIAKNAPPLGNLRLNTTPS*LRQVFTTTAGTTLN*EQHAE-NTTECAHSPSQ 380
RQ K + II +NA L L+ + QV + TTL E H E N E A + S
Sbjct: 270 RQIKIEDKIIKQNAEELQQLKKKVSRLVGNQVQGQNSNTTLPAESHGESNNAETADNKSS 329
Query: 381 TLVTRTLSPL 410
+L T+++S L
Sbjct: 330 SLWTKSVSLL 339
>UniRef50_Q5KA50 Cluster: Expressed protein; n=1; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 289
Score = 31.5 bits (68), Expect = 9.7
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = -3
Query: 250 GGAFLAMITSFALPCRRVFKVCLYPKQYF----PDFITKARRELIDSMVFF 110
GG F A++ S+ PC F +CL+P + D +++ RR +VFF
Sbjct: 130 GGMFEALLPSYIPPCHISFDLCLFPTEQVWSNRDDNLSRLRRLTNFLLVFF 180
>UniRef50_Q74MP1 Cluster: NEQ179; n=1; Nanoarchaeum equitans|Rep:
NEQ179 - Nanoarchaeum equitans
Length = 86
Score = 31.5 bits (68), Expect = 9.7
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 162 GKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
GK +G +TLK L+ G+ V++AKN P
Sbjct: 13 GKAVIGTNKTLKLLKLGQLSAVVLAKNVP 41
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 421,732,648
Number of Sequences: 1657284
Number of extensions: 7604431
Number of successful extensions: 18664
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 18233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18661
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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