Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30290
(425 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 165 4e-40
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 153 1e-36
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 144 9e-34
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 142 2e-33
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 142 3e-33
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 138 3e-32
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 99 2e-20
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 60 2e-19
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 94 9e-19
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 84 1e-15
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 83 2e-15
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 83 2e-15
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 81 9e-15
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 75 6e-13
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 73 2e-12
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 67 1e-10
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 57 1e-07
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 51 9e-06
UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa... 44 0.001
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 40 0.028
UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia j... 37 0.15
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 35 0.61
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 35 0.81
UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8; n... 34 1.1
UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole gen... 34 1.4
UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2; Sphingob... 33 2.5
UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular... 33 3.3
UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellula... 32 5.7
UniRef50_O67566 Cluster: 30S ribosomal protein S8; n=2; Aquifex|... 32 5.7
UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2; ... 31 7.5
UniRef50_Q7NEG6 Cluster: 30S ribosomal protein S8; n=165; Bacter... 31 7.5
UniRef50_P59031 Cluster: 30S ribosomal protein S8; n=8; Chlorobi... 31 7.5
UniRef50_A4GJ62 Cluster: Putative uncharacterized protein; n=1; ... 31 9.9
UniRef50_Q0P3I4 Cluster: Mitochondrion, complete genome; n=1; Os... 31 9.9
UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1; ... 31 9.9
UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26; Epsilon... 31 9.9
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 165 bits (400), Expect = 4e-40
Identities = 76/84 (90%), Positives = 82/84 (97%)
Frame = +3
Query: 3 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 182
MNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGKIVV
Sbjct: 4 MNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVV 63
Query: 183 NLTGRLNKCGVISPRFDVPINDIE 254
NLTGRLNKCGVISPRFDV + D+E
Sbjct: 64 NLTGRLNKCGVISPRFDVQLKDLE 87
Score = 80.6 bits (190), Expect = 1e-14
Identities = 36/43 (83%), Positives = 39/43 (90%), Gaps = 1/43 (2%)
Frame = +2
Query: 254 RW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 379
+W NLLPSRQFG++VLTTS GIMDHEEARRKH GGKILGFFF
Sbjct: 88 KWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 153 bits (371), Expect = 1e-36
Identities = 72/84 (85%), Positives = 78/84 (92%)
Frame = +3
Query: 3 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 182
MNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV FLTVMMKHGY GEFEI+DDHR GKIVV
Sbjct: 127 MNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGKIVV 186
Query: 183 NLTGRLNKCGVISPRFDVPINDIE 254
NLTGRLNKCGVIS RFDV + D++
Sbjct: 187 NLTGRLNKCGVISLRFDVQLKDLD 210
Score = 74.1 bits (174), Expect = 1e-12
Identities = 33/43 (76%), Positives = 37/43 (86%), Gaps = 1/43 (2%)
Frame = +2
Query: 254 RW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 379
+W NLLP RQFG++VLTT GI+DHEEARRKH GGKILGFFF
Sbjct: 211 KWQNNLLPLRQFGFIVLTTLAGIIDHEEARRKHTGGKILGFFF 253
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 144 bits (348), Expect = 9e-34
Identities = 68/80 (85%), Positives = 74/80 (92%)
Frame = +3
Query: 15 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTG 194
SDALKSI+NAEKRGKRQVLIR CSKVIV+FL+VMMKHGYIGEFEI+DDH AGKIVVNLTG
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTG 233
Query: 195 RLNKCGVISPRFDVPINDIE 254
RLNKCGVI+ RFDV D+E
Sbjct: 234 RLNKCGVINTRFDVQPKDLE 253
Score = 57.6 bits (133), Expect = 1e-07
Identities = 25/37 (67%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Frame = +2
Query: 254 RW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGK 361
+W NL PS QFG++VLTTS GIMDHEEAR+KH G +
Sbjct: 254 KWRNNLFPSCQFGFIVLTTSAGIMDHEEARQKHTGSR 290
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 142 bits (345), Expect = 2e-33
Identities = 67/84 (79%), Positives = 74/84 (88%)
Frame = +3
Query: 3 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 182
MNVL DALKS ++AEK GKRQ IR CSK IV+FLTVMMKHGYI EFEI+DDHRAGK+VV
Sbjct: 102 MNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRAGKMVV 161
Query: 183 NLTGRLNKCGVISPRFDVPINDIE 254
NLTGRLNKCGVISPRFDV + D+E
Sbjct: 162 NLTGRLNKCGVISPRFDVQLKDLE 185
Score = 66.5 bits (155), Expect = 2e-10
Identities = 29/42 (69%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
Frame = +2
Query: 254 RW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFF 376
+W NLLP+RQFG++VLTT GIMD EE R+KH GG+ILGFF
Sbjct: 186 KWQNNLLPARQFGFIVLTTLAGIMDREEGRQKHTGGEILGFF 227
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 142 bits (344), Expect = 3e-33
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = +3
Query: 3 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 182
++VL+D LKS++NAEKRGKRQV+IRP SKVI+KFL VM KHGYIGEFE VDDHR+GKIVV
Sbjct: 4 ISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVV 63
Query: 183 NLTGRLNKCGVISPRFDVPINDIE 254
L GRLNKCGVISPRFDV + +IE
Sbjct: 64 ELNGRLNKCGVISPRFDVGVKEIE 87
Score = 75.8 bits (178), Expect = 4e-13
Identities = 33/42 (78%), Positives = 39/42 (92%), Gaps = 1/42 (2%)
Frame = +2
Query: 257 WT-NLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 379
WT LLPSRQFG++VLTTS GIMDHEEARRK++GGK+LGFF+
Sbjct: 89 WTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 138 bits (335), Expect = 3e-32
Identities = 65/83 (78%), Positives = 75/83 (90%)
Frame = +3
Query: 6 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 185
NVL+DALK I+NA+KRGKRQVL+RPCS+VI++FLTVM KHGYIGEFEI DDHRAGK+VV
Sbjct: 5 NVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTVM-KHGYIGEFEITDDHRAGKMVVY 63
Query: 186 LTGRLNKCGVISPRFDVPINDIE 254
LT RLNKCGVISPRF V + D+E
Sbjct: 64 LTDRLNKCGVISPRFHVQLKDLE 86
Score = 71.7 bits (168), Expect = 6e-12
Identities = 32/43 (74%), Positives = 36/43 (83%), Gaps = 1/43 (2%)
Frame = +2
Query: 254 RW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 379
+W NLLPS QFG+++LTTS GI D EEARRKH GGKILGFFF
Sbjct: 87 KWQNNLLPSYQFGFIILTTSAGITDREEARRKHTGGKILGFFF 129
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 99 bits (238), Expect = 2e-20
Identities = 45/83 (54%), Positives = 60/83 (72%)
Frame = +3
Query: 3 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 182
+N L++AL +++N E R +Q LI P SK+I+ L VM K GYIGEFE +DD RAGKI+V
Sbjct: 4 INPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGKIIV 63
Query: 183 NLTGRLNKCGVISPRFDVPINDI 251
L GR+NKCG ISPR+ + N +
Sbjct: 64 QLLGRINKCGPISPRYPLDYNGL 86
Score = 38.7 bits (86), Expect = 0.050
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 269 LPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 379
LPS++ G ++++T G+M H + R+ +GG LG+ +
Sbjct: 97 LPSKEIGIIIISTPKGVMSHRDGIREKIGGVTLGYVY 133
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 60.1 bits (139), Expect(2) = 2e-19
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +3
Query: 126 GYIGEFEIVDDHRAGKIVVNLTGRLNKCGVI 218
GYI EFE +DDHRAGKIVV L GR+NKCGVI
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRINKCGVI 137
Score = 56.8 bits (131), Expect(2) = 2e-19
Identities = 24/33 (72%), Positives = 30/33 (90%)
Frame = +3
Query: 27 KSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKH 125
+S++NAEKRGKRQVL+RP SKV++KFL VM KH
Sbjct: 44 ESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 94.3 bits (224), Expect = 9e-19
Identities = 44/84 (52%), Positives = 60/84 (71%)
Frame = +3
Query: 3 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 182
++ L++AL I N+E+ GKR+V I+P SK+I + L VM K+GYIGEFE +DD RAG V
Sbjct: 4 LDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGVYRV 63
Query: 183 NLTGRLNKCGVISPRFDVPINDIE 254
L GR+NK G I PRF V +++ E
Sbjct: 64 QLLGRINKAGAIKPRFPVKVSEFE 87
Score = 42.7 bits (96), Expect = 0.003
Identities = 16/43 (37%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +2
Query: 254 RWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 379
+W LP+ +FG L+++TS G+M H+EA K +GG+++ + +
Sbjct: 88 KWEKRFLPAFEFGILIVSTSQGVMSHKEAIEKGIGGRLIAYVY 130
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 83.8 bits (198), Expect = 1e-15
Identities = 38/82 (46%), Positives = 56/82 (68%)
Frame = +3
Query: 9 VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL 188
+L+DAL++I NAE+RGK V ++P S V+ FL +M + GYI F++ D HR G+I V+L
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64
Query: 189 TGRLNKCGVISPRFDVPINDIE 254
GR+N C ++ R DV +IE
Sbjct: 65 QGRVNDCKALTYRQDVRAKEIE 86
Score = 58.4 bits (135), Expect = 6e-08
Identities = 22/37 (59%), Positives = 34/37 (91%)
Frame = +2
Query: 269 LPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 379
LP+RQ+GY+V+TT GI+DHEEA ++++GG++LGFF+
Sbjct: 93 LPTRQWGYVVITTPDGILDHEEAIKRNVGGQVLGFFY 129
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 83.4 bits (197), Expect = 2e-15
Identities = 40/84 (47%), Positives = 52/84 (61%)
Frame = +3
Query: 3 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 182
++ L++AL +I NAE GK ++RP SK I L VM GYIG+FE +DD +AG V
Sbjct: 4 LDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGIYSV 63
Query: 183 NLTGRLNKCGVISPRFDVPINDIE 254
L GR+NKCG I PR+ V E
Sbjct: 64 TLVGRINKCGAIKPRYSVGTGSFE 87
Score = 47.2 bits (107), Expect = 1e-04
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +2
Query: 254 RWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 379
RW LP++ FG L+LTTS G+M EAR K +GG++L + +
Sbjct: 88 RWEKQFLPAKNFGALILTTSSGVMSQYEARDKKIGGQLLAYVY 130
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 83.0 bits (196), Expect = 2e-15
Identities = 37/82 (45%), Positives = 57/82 (69%)
Frame = +3
Query: 12 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 191
L++ K+I+NA + GKRQ+L+R ++ + FL M++HGYI F + D R+GK +++L
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSIIDLN 64
Query: 192 GRLNKCGVISPRFDVPINDIED 257
GRLN+CG ISP + V + IED
Sbjct: 65 GRLNRCGAISPNYIVKRDGIED 86
Score = 56.0 bits (129), Expect = 3e-07
Identities = 22/40 (55%), Positives = 33/40 (82%)
Frame = +2
Query: 260 TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 379
T LLP+RQFG+++ TS GI+DH+E +++GGKILG+F+
Sbjct: 89 TRLLPARQFGHVLFNTSKGILDHKECLTENVGGKILGYFY 128
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 81.0 bits (191), Expect = 9e-15
Identities = 37/84 (44%), Positives = 55/84 (65%)
Frame = +3
Query: 3 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 182
++ LS+A+ +I NAE G+++ I+P SK+I L VM +GYI FE V++HR GK +V
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIV 62
Query: 183 NLTGRLNKCGVISPRFDVPINDIE 254
L+G +N CG I PRF + + E
Sbjct: 63 ELSGNINDCGAIRPRFSSSVTEYE 86
Score = 42.3 bits (95), Expect = 0.004
Identities = 15/37 (40%), Positives = 28/37 (75%)
Frame = +2
Query: 269 LPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 379
LP+R FG L+++T+ G+M ++AR++ LGG +L + +
Sbjct: 93 LPARDFGILIVSTTKGVMSQKDARKQRLGGVLLAYVY 129
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 74.9 bits (176), Expect = 6e-13
Identities = 34/81 (41%), Positives = 51/81 (62%)
Frame = +3
Query: 12 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 191
L+D + +I NA + GK +V+I P S +I + L VM + YI FE++++ R GK V L+
Sbjct: 6 LNDVINTIKNASRIGKSEVIIGPASVMIGRILKVMQDYNYIKSFEVIEEERGGKFRVELS 65
Query: 192 GRLNKCGVISPRFDVPINDIE 254
+N CGVI PR V ++IE
Sbjct: 66 DTINNCGVIKPRLSVKNSNIE 86
Score = 46.0 bits (104), Expect = 3e-04
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +2
Query: 269 LPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 379
LP++ FG ++LTT+ GIM H EAR+ +GGK+L + +
Sbjct: 93 LPAQDFGIIILTTTKGIMSHIEARKLGIGGKLLAYVY 129
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 73.3 bits (172), Expect = 2e-12
Identities = 34/77 (44%), Positives = 49/77 (63%)
Frame = +3
Query: 6 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 185
N+L++ +++N E R + + P SK+ V+ L + K GYIGEFE V+D R GK V+
Sbjct: 5 NILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGKFSVH 64
Query: 186 LTGRLNKCGVISPRFDV 236
L ++ KCG ISPRF V
Sbjct: 65 LLAKITKCGAISPRFKV 81
Score = 39.9 bits (89), Expect = 0.021
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +2
Query: 269 LPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 379
LPS G LV+TT+ G+M H EA + +GG ++G+ +
Sbjct: 94 LPSYDRGMLVVTTNQGVMSHHEAAERGIGGFLIGYVY 130
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 67.3 bits (157), Expect = 1e-10
Identities = 30/80 (37%), Positives = 44/80 (55%)
Frame = +3
Query: 15 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTG 194
++AL + NAE G + P S +I L V+ GY+ FE VDD +AGK V L G
Sbjct: 25 TNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKAGKFEVELKG 84
Query: 195 RLNKCGVISPRFDVPINDIE 254
+N+CG + PR+ ++ E
Sbjct: 85 AINECGAVKPRYSAGADEFE 104
Score = 45.2 bits (102), Expect = 6e-04
Identities = 16/37 (43%), Positives = 28/37 (75%)
Frame = +2
Query: 269 LPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 379
LP+R +G L++TTS G+M H EAR + +GG+++ + +
Sbjct: 111 LPARDYGTLIVTTSHGVMSHYEAREEGIGGQVIAYVY 147
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 57.2 bits (132), Expect = 1e-07
Identities = 24/83 (28%), Positives = 46/83 (55%)
Frame = +3
Query: 6 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 185
++++D L + N ++G+ + P S +I+K + +M + GYI + +VD R I +
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSRGKIIEIE 63
Query: 186 LTGRLNKCGVISPRFDVPINDIE 254
L+ N+ I PRF V +++E
Sbjct: 64 LSEYFNEANAIKPRFPVEYSELE 86
Score = 36.3 bits (80), Expect = 0.26
Identities = 13/37 (35%), Positives = 26/37 (70%)
Frame = +2
Query: 269 LPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 379
LP+ FG L+L+TS G++ + EA+ + +GG ++ + +
Sbjct: 93 LPALNFGRLILSTSKGLITNREAKEQKIGGVLIAYVY 129
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 51.2 bits (117), Expect = 9e-06
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +3
Query: 102 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIE 254
F+TV MK G+FEIVD+ G+I V+L G LNK GVI FDV + D+E
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGSLNKYGVIGLGFDVQLGDLE 50
>UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa|Rep:
Os01g0153200 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1139
Score = 44.4 bits (100), Expect = 0.001
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +3
Query: 150 VDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIEDG 260
VDDH++G+I++ GRLNK GVIS R DV + + G
Sbjct: 912 VDDHKSGEIILEFDGRLNKWGVISFRSDVKVKKLSPG 948
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 39.5 bits (88), Expect = 0.028
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +3
Query: 132 IGEFEIVDDHRAGKIVVNLTGRLNK 206
IG+FE++DDHRAGKIV NL+ ++ +
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQ 33
>UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia
japonica|Rep: Ribosome protein S8 - Griffithsia japonica
(Red alga)
Length = 142
Score = 37.1 bits (82), Expect = 0.15
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 236 SHQRY*RWTNLLPSRQ-FGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 379
SH+ Y + T L +R G +L+T G+M EAR+K LGG+++G F
Sbjct: 94 SHRVYRKITQLPLARAGLGTWILSTPNGVMHCTEARQKRLGGEVIGEVF 142
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 35.1 bits (77), Expect = 0.61
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +3
Query: 6 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 149
+ +SD L I NA K+ VLI P +K+ +K ++ K GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 34.7 bits (76), Expect = 0.81
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 12 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEF 143
++D L + N + G +V+ PCSKV++ L ++++ GYI F
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESF 49
>UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8;
n=118; Viridiplantae|Rep: Chloroplast 30S ribosomal
protein S8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 134
Score = 34.3 bits (75), Expect = 1.1
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2
Query: 287 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 379
G ++L+TS GIM EAR K +GG+IL + +
Sbjct: 104 GIVILSTSQGIMTDREARLKRIGGEILCYIW 134
>UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_16, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 93
Score = 33.9 bits (74), Expect = 1.4
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 287 GYLVLTTSGGIMDHEEARRKHLGGKIL 367
G ++L+TS GIM EAR K +GG+IL
Sbjct: 2 GIVILSTSRGIMTDREARLKRIGGEIL 28
>UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2;
Sphingobacteriales|Rep: 30S ribosomal protein S8 -
Salinibacter ruber (strain DSM 13855)
Length = 133
Score = 33.1 bits (72), Expect = 2.5
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 287 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 379
G ++L+TS G+M +EARR +GG++L F
Sbjct: 103 GIVILSTSRGVMSDKEARRFGVGGEVLAKVF 133
>UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechocystis
sp. (strain PCC 6803)
Length = 133
Score = 32.7 bits (71), Expect = 3.3
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 287 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 379
G +++TS GIM EARR+ +GG+IL + +
Sbjct: 103 GIAIVSTSHGIMTDREARRQGIGGEILCYIW 133
>UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 136
Score = 31.9 bits (69), Expect = 5.7
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2
Query: 287 GYLVLTTSGGIMDHEEARRKHLGGKIL 367
G +++TS GIM EAR++ +GG++L
Sbjct: 106 GIAIISTSNGIMTDREARKQGIGGEVL 132
>UniRef50_O67566 Cluster: 30S ribosomal protein S8; n=2;
Aquifex|Rep: 30S ribosomal protein S8 - Aquifex aeolicus
Length = 168
Score = 31.9 bits (69), Expect = 5.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 278 RQFGYLVLTTSGGIMDHEEARRKHLGGKILGF 373
R G +++T G+M EARR GG+++ F
Sbjct: 135 RGLGIAIVSTDAGVMTDHEARRMRKGGEVIAF 166
>UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 186
Score = 31.5 bits (68), Expect = 7.5
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 284 FGYLVLTTSGGIMDHEEARRKHLGGKILGFF 376
+GY+V+TT G++DHEE G +LG+F
Sbjct: 162 WGYVVITTPNGVLDHEE-------GPLLGYF 185
>UniRef50_Q7NEG6 Cluster: 30S ribosomal protein S8; n=165;
Bacteria|Rep: 30S ribosomal protein S8 - Gloeobacter
violaceus
Length = 133
Score = 31.5 bits (68), Expect = 7.5
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2
Query: 287 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 379
G +++TS G+M +ARR +GG++L + F
Sbjct: 103 GIAIISTSQGVMTDRDARRAGVGGEVLCYVF 133
>UniRef50_P59031 Cluster: 30S ribosomal protein S8; n=8;
Chlorobiaceae|Rep: 30S ribosomal protein S8 - Chlorobium
tepidum
Length = 131
Score = 31.5 bits (68), Expect = 7.5
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +2
Query: 287 GYLVLTTSGGIMDHEEARRKHLGGKIL 367
G +L+TS GI+ +EAR +++GG++L
Sbjct: 101 GLFILSTSKGILTDKEAREQNVGGEVL 127
>UniRef50_A4GJ62 Cluster: Putative uncharacterized protein; n=1;
uncultured Nitrospinaceae bacterium|Rep: Putative
uncharacterized protein - uncultured Nitrospinaceae
bacterium
Length = 284
Score = 31.1 bits (67), Expect = 9.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 45 EKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHR 164
E+ GK ++ +K V F T KH Y EFE++D R
Sbjct: 76 EEHGKYFSVLEASTKGFVGFFTAYRKHYYKTEFEVIDKGR 115
>UniRef50_Q0P3I4 Cluster: Mitochondrion, complete genome; n=1;
Ostreococcus tauri|Rep: Mitochondrion, complete genome -
Ostreococcus tauri
Length = 124
Score = 31.1 bits (67), Expect = 9.9
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 3 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYI 134
M +L+ S+ N + ++Q++ P SK LTV++ HGYI
Sbjct: 1 MKLLTQMFTSLRNGQM-SRKQIVHMPYSKFCWNVLTVLLFHGYI 43
>UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1;
Aeromonas phage Aeh1|Rep: Putative uncharacterized
protein - Aeromonas phage Aeh1
Length = 85
Score = 31.1 bits (67), Expect = 9.9
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 6 NVLSDALKSIHNAEKRGKRQVLIRP-CSKVIVKFLTVMMKHGYIGEFEIVDDHRA 167
+++++ K I +A +GKR + S + + + + KHGY EF + DHR+
Sbjct: 21 DLINNISKRIESASVQGKRVTYVYDVASDIRSEVINEITKHGYEVEFVVETDHRS 75
>UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26;
Epsilonproteobacteria|Rep: 30S ribosomal protein S8 -
Wolinella succinogenes
Length = 131
Score = 31.1 bits (67), Expect = 9.9
Identities = 17/69 (24%), Positives = 38/69 (55%)
Frame = +3
Query: 6 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 185
++++D+L I NA R + +K++V L V + G+I ++++D + GK +N
Sbjct: 4 DIIADSLTRIRNAAMRRLDYTTLY-YAKIVVSILEVFLAKGFIESYKVID--KDGKQSIN 60
Query: 186 LTGRLNKCG 212
+ + ++ G
Sbjct: 61 VVLKYDEKG 69
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 372,962,365
Number of Sequences: 1657284
Number of extensions: 6906101
Number of successful extensions: 14337
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 14077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14336
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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