Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30289
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    25   0.61 
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   1.9  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   2.5  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   2.5  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   2.5  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    23   2.5  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    23   2.5  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +1

Query: 202 ASCTPPALTPPHRPRTS 252
           A  T P LTPPH P  S
Sbjct: 12  ADSTSPLLTPPHNPAYS 28


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 337 CSVYSSQYMVKNGVDDAVDIYSGAGGTV 254
           C  Y  +  V   VD+   +YSG  G V
Sbjct: 253 CQYYQGKNCVGGKVDETAGVYSGWEGQV 280


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 264 VAQCGCAWAMWWRQRRGRT 208
           + Q GCA  +W R RR  T
Sbjct: 215 ILQSGCALNLWARSRRYTT 233


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 264 VAQCGCAWAMWWRQRRGRT 208
           + Q GCA  +W R RR  T
Sbjct: 215 ILQSGCALNLWARSRRYTT 233


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 264 VAQCGCAWAMWWRQRRGRT 208
           + Q GCA  +W R RR  T
Sbjct: 215 ILQSGCALNLWARSRRYTT 233


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 264 VAQCGCAWAMWWRQRRGRT 208
           + Q GCA  +W R RR  T
Sbjct: 215 ILQSGCALNLWARSRRYTT 233


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 264 VAQCGCAWAMWWRQRRGRT 208
           + Q GCA  +W R RR  T
Sbjct: 214 ILQSGCALNLWARSRRYTT 232


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,196
Number of Sequences: 336
Number of extensions: 3242
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)