Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30289
(713 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 29 0.058
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 3.8
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 3.8
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 3.8
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 3.8
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 3.8
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 3.8
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 3.8
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 3.8
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 22 5.0
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 22 5.0
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 22 5.0
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 6.6
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 28.7 bits (61), Expect = 0.058
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1
Query: 166 SPRTMQWNSGCVASCTPPALTPPHR 240
+P W CVA PP TPP R
Sbjct: 379 NPAMGHWQMSCVACSPPPRQTPPSR 403
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.8
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 574 HNYNRLNKLYRSLI*ILNYLQ 636
+NYN N Y+ L +NY++
Sbjct: 89 YNYNNYNNNYKPLYYNINYIE 109
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.8
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 574 HNYNRLNKLYRSLI*ILNYLQ 636
+NYN N Y+ L +NY++
Sbjct: 89 YNYNNYNNNYKPLYYNINYIE 109
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.8
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 574 HNYNRLNKLYRSLI*ILNYLQ 636
+NYN N Y+ L +NY++
Sbjct: 89 YNYNNYNNNYKPLYYNINYIE 109
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.8
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 574 HNYNRLNKLYRSLI*ILNYLQ 636
+NYN N Y+ L +NY++
Sbjct: 89 YNYNNYNNNYKPLYYNINYIE 109
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.8
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 574 HNYNRLNKLYRSLI*ILNYLQ 636
+NYN N Y+ L +NY++
Sbjct: 322 YNYNNYNNNYKPLYYNINYIE 342
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.8
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 574 HNYNRLNKLYRSLI*ILNYLQ 636
+NYN N Y+ L +NY++
Sbjct: 322 YNYNNYNNNYKPLYYNINYIE 342
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.8
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 574 HNYNRLNKLYRSLI*ILNYLQ 636
+NYN N Y+ L +NY++
Sbjct: 322 YNYNNYNNNYKPLYYNINYIE 342
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 3.8
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 574 HNYNRLNKLYRSLI*ILNYLQ 636
+NYN N Y+ L +NY++
Sbjct: 311 YNYNNYNNNYKPLYYNINYIE 331
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 22.2 bits (45), Expect = 5.0
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 56 HEPIFDKVLSKEIII 12
H PIFD+ +++E I+
Sbjct: 365 HVPIFDRYINREYIL 379
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.2 bits (45), Expect = 5.0
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 56 HEPIFDKVLSKEIII 12
H PIFD+ +++E I+
Sbjct: 365 HVPIFDRYINREYIL 379
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.2 bits (45), Expect = 5.0
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 56 HEPIFDKVLSKEIII 12
H PIFD+ +++E I+
Sbjct: 365 HVPIFDRYINREYIL 379
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 574 HNYNRLNKLYRSLI*ILNYLQ 636
+NYN N Y+ L +NY++
Sbjct: 322 YNYNNYNNNYKPLHYNINYIE 342
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,716
Number of Sequences: 438
Number of extensions: 4072
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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