BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30288 (630 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 133 2e-32 SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 127 2e-30 SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 107 1e-24 SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 103 2e-23 SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 75 9e-15 SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 51 1e-07 SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 42 1e-04 SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 33 0.034 SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 33 0.034 SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 30 0.24 SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 29 0.73 SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.73 SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 3.0 SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 26 5.2 SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 26 5.2 SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|c... 25 9.0 SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 9.0 >SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces pombe|chr 3|||Manual Length = 647 Score = 133 bits (321), Expect = 2e-32 Identities = 61/86 (70%), Positives = 70/86 (81%) Frame = +1 Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEXXXXXXKPKIKVAYKGEDKTFFPEEVSSM 429 PHNTIFDAKRLIGRKF+D VQ+DMKHWPF+ KP ++V YKGE KTF PEE+SSM Sbjct: 61 PHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSM 120 Query: 430 VLTKMKETAEAYLGQTVQNAVITVPA 507 VL KM+ETAEAYLG V +AV+TVPA Sbjct: 121 VLMKMRETAEAYLGGKVTDAVVTVPA 146 Score = 112 bits (269), Expect = 5e-26 Identities = 51/58 (87%), Positives = 55/58 (94%) Frame = +2 Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253 ++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61 Score = 74.9 bits (176), Expect = 9e-15 Identities = 35/38 (92%), Positives = 37/38 (97%) Frame = +3 Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 623 FNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ Sbjct: 148 FNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDR 185 >SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces pombe|chr 1|||Manual Length = 644 Score = 127 bits (306), Expect = 2e-30 Identities = 58/86 (67%), Positives = 69/86 (80%) Frame = +1 Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEXXXXXXKPKIKVAYKGEDKTFFPEEVSSM 429 PHNTIFDAKRLIGR+F D VQ+DMKHWPF+ KP I+V +KGE KTF PEE+SSM Sbjct: 61 PHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSM 120 Query: 430 VLTKMKETAEAYLGQTVQNAVITVPA 507 VL KM+E+AEA+LG V +AV+TVPA Sbjct: 121 VLLKMRESAEAFLGGKVTDAVVTVPA 146 Score = 112 bits (269), Expect = 5e-26 Identities = 51/58 (87%), Positives = 55/58 (94%) Frame = +2 Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253 ++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61 Score = 74.9 bits (176), Expect = 9e-15 Identities = 35/38 (92%), Positives = 37/38 (97%) Frame = +3 Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 623 FNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ Sbjct: 148 FNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDR 185 >SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces pombe|chr 2|||Manual Length = 613 Score = 107 bits (257), Expect = 1e-24 Identities = 50/86 (58%), Positives = 62/86 (72%) Frame = +1 Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEXXXXXXKPKIKVAYKGEDKTFFPEEVSSM 429 P NT+FDAKRLIGR++ED Q D+KHWPF+ P I+V Y GE K F +E+S+M Sbjct: 65 PRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAM 124 Query: 430 VLTKMKETAEAYLGQTVQNAVITVPA 507 VLTKMKE +EA L + V+ AVITVPA Sbjct: 125 VLTKMKEISEAKLNKRVEKAVITVPA 150 Score = 100 bits (239), Expect = 2e-22 Identities = 45/58 (77%), Positives = 51/58 (87%) Frame = +2 Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253 A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNP 65 Score = 71.7 bits (168), Expect = 8e-14 Identities = 34/39 (87%), Positives = 36/39 (92%) Frame = +3 Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 626 F+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K Sbjct: 152 FSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAK 190 >SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||Manual Length = 663 Score = 103 bits (248), Expect = 2e-23 Identities = 47/86 (54%), Positives = 64/86 (74%) Frame = +1 Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEXXXXXXKPKIKVAYKGEDKTFFPEEVSSM 429 P NTIFD KRLIGRKF++ T+ D+K +PF +P ++V G+ K F PEE+S+M Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAM 153 Query: 430 VLTKMKETAEAYLGQTVQNAVITVPA 507 +L+KMK+TAEAYLG+ V +AV+TVPA Sbjct: 154 ILSKMKQTAEAYLGKPVTHAVVTVPA 179 Score = 98.3 bits (234), Expect = 8e-22 Identities = 43/57 (75%), Positives = 50/57 (87%) Frame = +2 Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253 +GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNP 94 Score = 76.2 bits (179), Expect = 4e-15 Identities = 34/38 (89%), Positives = 38/38 (100%) Frame = +3 Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 623 FND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK Sbjct: 181 FNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDK 218 >SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces pombe|chr 1|||Manual Length = 674 Score = 74.9 bits (176), Expect = 9e-15 Identities = 36/86 (41%), Positives = 52/86 (60%) Frame = +1 Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEXXXXXXKPKIKVAYKGEDKTFFPEEVSSM 429 P NT F KRLIGR+F++ VQ D+K P++ + KT+ P ++ Sbjct: 110 PENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGGF 166 Query: 430 VLTKMKETAEAYLGQTVQNAVITVPA 507 +L+KM+ETA YLG+ V+NAV+TVPA Sbjct: 167 ILSKMRETASTYLGKDVKNAVVTVPA 192 Score = 73.7 bits (173), Expect = 2e-14 Identities = 33/39 (84%), Positives = 37/39 (94%) Frame = +3 Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 626 FNDSQRQATK AG I+GLNVLR++NEPTAAA+AYGLDKK Sbjct: 194 FNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK 232 Score = 73.3 bits (172), Expect = 3e-14 Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Frame = +2 Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 247 K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q + Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108 Query: 248 NPTTQY 265 NP + Sbjct: 109 NPENTF 114 >SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Schizosaccharomyces pombe|chr 1|||Manual Length = 720 Score = 51.2 bits (117), Expect = 1e-07 Identities = 21/61 (34%), Positives = 39/61 (63%) Frame = +2 Query: 68 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 247 ++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62 Query: 248 N 250 N Sbjct: 63 N 63 Score = 43.6 bits (98), Expect = 2e-05 Identities = 19/38 (50%), Positives = 27/38 (71%) Frame = +3 Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 623 F D QR+A +A I+GLN LR++N+ AAA+ YG+ K Sbjct: 152 FTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITK 189 Score = 38.3 bits (85), Expect = 0.001 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%) Frame = +1 Query: 256 NTIFDAKRLIGRKFEDATVQ-ADMKHWPFEXXXXXXKPKIKVAYKGEDKTFFPEEVSSMV 432 NT+ KRL GR ++D ++ + + KV Y E+ F ++ + Sbjct: 66 NTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAAY 125 Query: 433 LTKMKETAEAYLGQTVQNAVITVPA 507 TK+K AEA L +V + VI++PA Sbjct: 126 FTKIKAIAEAELIGSVSDVVISIPA 150 >SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pombe|chr 1|||Manual Length = 566 Score = 41.5 bits (93), Expect = 1e-04 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +2 Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 250 +GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRN 82 Score = 27.5 bits (58), Expect = 1.7 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +1 Query: 391 EDKTFFPEEVSSMVLTKMKETAEAYLGQTVQNAVITVP 504 ++K E S L ++ E+AE +LG V V++VP Sbjct: 134 KEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVP 171 >SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pombe|chr 1||Partial|Manual Length = 1887 Score = 33.1 bits (72), Expect = 0.034 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = -2 Query: 551 GTCIFCGLSLRVIEDAGTVITAFCTVWPR*ASAVSFIF 438 G C+FCGL+ D+ T+ C W R A+ +S ++ Sbjct: 1827 GLCLFCGLTKFEHADSDMAYTSDCRSWARKANLISLVY 1864 >SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces pombe|chr 2|||Manual Length = 1919 Score = 33.1 bits (72), Expect = 0.034 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = -2 Query: 551 GTCIFCGLSLRVIEDAGTVITAFCTVWPR*ASAVSFIF 438 G C+FCGL+ D+ T+ C W R A+ +S ++ Sbjct: 1827 GLCLFCGLTKFEHADSDMAYTSDCRSWARKANLISLVY 1864 >SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 848 Score = 30.3 bits (65), Expect = 0.24 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +2 Query: 83 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTT 259 + ID GT ++ + + G +EI+ R S VAF ER+ G A N P Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPA- 83 Query: 260 QYSMPNV 280 +S+ NV Sbjct: 84 -HSIRNV 89 >SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces pombe|chr 1|||Manual Length = 2244 Score = 28.7 bits (61), Expect = 0.73 Identities = 15/45 (33%), Positives = 25/45 (55%) Frame = +2 Query: 179 PSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDVSSKMLLC 313 P +A T ER++ AAK A+N T Y++ ++ D K++ C Sbjct: 1252 PQDLAPTTIERIVDAAAKIGEALNITGPYNIQFIAKDNEIKVIEC 1296 >SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosaccharomyces pombe|chr 1|||Manual Length = 378 Score = 28.7 bits (61), Expect = 0.73 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +3 Query: 75 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 170 HP S W+P LVS+ W +SP+++ T Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314 >SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces pombe|chr 2|||Manual Length = 713 Score = 26.6 bits (56), Expect = 3.0 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +3 Query: 108 TLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRTRWR*TPQHNI 266 T +L S+STG+ T++ T L + PS S+ P T + TP +NI Sbjct: 282 TSSLTSNSTGK-----TSKTTDLLIAASKKSLPSNSTPSKPNTSFFETPHNNI 329 >SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosaccharomyces pombe|chr 1|||Manual Length = 411 Score = 25.8 bits (54), Expect = 5.2 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = -2 Query: 161 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARL 3 G W SP S + H ++++ +F +RVL C+ L K +K+A L Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALL 323 >SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6 |Schizosaccharomyces pombe|chr 2|||Manual Length = 675 Score = 25.8 bits (54), Expect = 5.2 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = +2 Query: 224 AAKNQVAMNPTTQYSMPNVSSDVSSKML 307 A K Q+ +NP + +PNV D + +L Sbjct: 323 ARKRQIQLNPFPPWDVPNVLEDQMNSLL 350 >SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|chr 3|||Manual Length = 479 Score = 25.0 bits (52), Expect = 9.0 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Frame = -1 Query: 552 WYLHLLWLVFESH*RRGNRDNCILHSLAKISFGSFLHFRKHHGTDFLGEKGFVF-TLICY 376 WY H+ W++ + RR R + ++ ++ F+ F H F+F +L C Sbjct: 168 WYAHVGWMIILQNPRRIGRSD-----VSDLNSDPFVMFNHRHFLPIASFMAFIFPSLFCG 222 Query: 375 L 373 L Sbjct: 223 L 223 >SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1087 Score = 25.0 bits (52), Expect = 9.0 Identities = 9/26 (34%), Positives = 15/26 (57%) Frame = +1 Query: 61 QNGKSTRSRNRSGYHVLLRWCLPARE 138 +NGK T +R +S + W P++E Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE 502 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,713,145 Number of Sequences: 5004 Number of extensions: 57474 Number of successful extensions: 188 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 169 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 185 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 279695522 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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