Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30288
(630 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 2e-31
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 132 3e-31
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 131 4e-31
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 111 6e-25
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 65 4e-11
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 54 1e-07
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 5e-04
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.77
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 2.4
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 4.1
SB_52667| Best HMM Match : MRP-L47 (HMM E-Value=0.0013) 28 7.2
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 7.2
SB_24762| Best HMM Match : Astacin (HMM E-Value=0) 28 7.2
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 28 7.2
SB_39617| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38) 27 9.5
SB_37853| Best HMM Match : REJ (HMM E-Value=0.00025) 27 9.5
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 132 bits (319), Expect = 2e-31
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 245 MNPT 256
MNPT
Sbjct: 61 MNPT 64
Score = 104 bits (250), Expect = 5e-23
Identities = 61/111 (54%), Positives = 68/111 (61%), Gaps = 25/111 (22%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEXXXXXXKPKIKVAYKGEDKTFFPEEV--- 420
P NTIFDAKRLIGR+F+D V+ DMKHW FE +PK+KV YKGE KTFF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 421 ----------------------SSMVLTKMKETAEAYLGQTVQNAVITVPA 507
SSMVL KMKETAEAYLG V +AV+TVPA
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPA 173
Score = 79.8 bits (188), Expect = 2e-15
Identities = 38/39 (97%), Positives = 38/39 (97%)
Frame = +3
Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 626
FNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK
Sbjct: 243 FNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKK 281
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +1
Query: 415 EVSSMVLTKMKETAEAYLGQTVQNAVITVPA 507
++SSMVL KMKETAEAYLG V +AV+TVPA
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPA 241
Score = 31.1 bits (67), Expect = 0.77
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 510 FNDSQRQATKDAG 548
FNDSQRQATKDAG
Sbjct: 175 FNDSQRQATKDAG 187
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 132 bits (318), Expect = 3e-31
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 245 MNP 253
MNP
Sbjct: 61 MNP 63
Score = 130 bits (314), Expect = 9e-31
Identities = 59/86 (68%), Positives = 68/86 (79%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEXXXXXXKPKIKVAYKGEDKTFFPEEVSSM 429
P NT+FDAKRLIGRKF+D V DM HWPF +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 430 VLTKMKETAEAYLGQTVQNAVITVPA 507
VLTKMKETAEAYLG V +AV+TVPA
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPA 148
Score = 78.6 bits (185), Expect = 4e-15
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +3
Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 626
F+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK
Sbjct: 150 FHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKK 188
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 131 bits (317), Expect = 4e-31
Identities = 63/86 (73%), Positives = 71/86 (82%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEXXXXXXKPKIKVAYKGEDKTFFPEEVSSM 429
P NTIFDAKRLIGR+++DATVQ+DMK WPF+ KPKI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 430 VLTKMKETAEAYLGQTVQNAVITVPA 507
VL KMKETAEAYLGQ V +AVITVPA
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPA 148
Score = 127 bits (306), Expect = 8e-30
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 245 MNP 253
+NP
Sbjct: 61 LNP 63
Score = 77.4 bits (182), Expect = 9e-15
Identities = 35/38 (92%), Positives = 38/38 (100%)
Frame = +3
Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 623
FNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK
Sbjct: 150 FNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDK 187
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 111 bits (266), Expect = 6e-25
Identities = 52/86 (60%), Positives = 66/86 (76%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEXXXXXXKPKIKVAYKGEDKTFFPEEVSSM 429
P NT+FDAKRLIGR ++D +VQ D+K +PF+ KP ++V K E KTF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 430 VLTKMKETAEAYLGQTVQNAVITVPA 507
VLTKMKETAEAYLG+ V +AV+TVPA
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPA 846
Score = 99 bits (238), Expect = 1e-21
Identities = 46/58 (79%), Positives = 52/58 (89%), Gaps = 1/58 (1%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNP 253
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP 761
Score = 73.3 bits (172), Expect = 1e-13
Identities = 33/39 (84%), Positives = 37/39 (94%)
Frame = +3
Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 626
FND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK
Sbjct: 848 FNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK 886
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 66.9 bits (156), Expect = 1e-11
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 NTIFDAKRLIGRKFEDATVQADMKHWPFEXXXXXXKP-KIKVAYKGEDKTFFPEEVSSMV 432
NTI KR IGRKF D VQ ++ H P++ I+V Y G+ + F PE+V +M+
Sbjct: 121 NTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAML 180
Query: 433 LTKMKETAEAYLGQTVQNAVITVPA 507
T++K TAE L V + VI+VP+
Sbjct: 181 FTRLKTTAEIALKTKVTDCVISVPS 205
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 238
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +3
Query: 483 ECSYHGSRVFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 626
+C + D QR+ DA +GLN LR++N+ TA ++AYG+ K+
Sbjct: 198 DCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQ 245
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 65.3 bits (152), Expect = 4e-11
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 245 MNP 253
+NP
Sbjct: 90 INP 92
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = +3
Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 626
F+ QR AT A +++G+ VLR+INEPTAAA+AYGL KK
Sbjct: 180 FDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK 218
Score = 52.4 bits (120), Expect = 3e-07
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEXXXXXX-KPKIKVAYKGEDKTFFPEEVSS 426
P NTI+DAKR IG+ F + K + F V KG PEE+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 427 MVLTKMKETAEAYLGQTVQNAVITVPASSMTLKDKPQKMQVPSLA 561
V+ K++ AE L TV AV++VPA +K + ++ SLA
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVPA-EFDIKQRNATVKAASLA 195
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +1
Query: 370 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGQTVQNAVITVPA 507
I V GE ++F PE++S++VL ++K AEA+LGQ V+ AVITVPA
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPA 47
Score = 52.4 bits (120), Expect = 3e-07
Identities = 35/62 (56%), Positives = 38/62 (61%), Gaps = 24/62 (38%)
Frame = +3
Query: 510 FNDSQRQATKDAGTISGLN------------------------VLRIINEPTAAAIAYGL 617
FND+QRQATKDAGTI+GL+ VLRIINEPTAAAIAYGL
Sbjct: 49 FNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGL 108
Query: 618 DK 623
DK
Sbjct: 109 DK 110
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 134 GKVEIIANDQGNRTTPSYVAFTDTERLI 217
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +3
Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 617
FN ++R+A A + GLNVL+I+N TA A+ YGL
Sbjct: 116 FNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGL 151
Score = 34.7 bits (76), Expect = 0.063
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 364 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGQTVQNAVITVP 504
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVP 113
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.77
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +2
Query: 143 EIIANDQGNRTTPSYVAFT-DTERL 214
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 52 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 228
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 229 QEPGGDEPHNTIFDA 273
G +P NT F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2
Query: 251 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 153
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 11 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 97
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_52667| Best HMM Match : MRP-L47 (HMM E-Value=0.0013)
Length = 119
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +1
Query: 274 KRLIGRKFEDATVQADMKHWPFEXXXXXXKPKIKVAYKGEDKTFFPEEVSSMVLTKMKET 453
K ++G + E A + + WPF+ + K + K P + +++ +TKM+E
Sbjct: 42 KLVLGER-ERAIQELSQQQWPFDVQDPALESTSKDLKETPIKETSPVQAATLNMTKMEEN 100
Query: 454 AEAYLGQT 477
+ G T
Sbjct: 101 QQELSGNT 108
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 93 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 236
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 42 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89
>SB_24762| Best HMM Match : Astacin (HMM E-Value=0)
Length = 733
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 546 LHLLWLVFESH*RRGNRDNCILHSLAKIS 460
++ LWL F + + D C+LHS+A ++
Sbjct: 415 IYTLWLDFSRYYSSASSDICVLHSIAHLA 443
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 93 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 236
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = +2
Query: 104 TYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVS 283
T++ + H I+ N G +TP + T A + + M PT V+
Sbjct: 559 THTTTSITLHPSSAILDNSLGPASTPRTTISSTTHVSSTPIASSSMVMTPTAINPSATVT 618
Query: 284 SDVSSKMLLCKP 319
+ V S ++ KP
Sbjct: 619 TTVPSTSVVVKP 630
>SB_39617| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38)
Length = 1084
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 173 TTPSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDVSSKMLLCK 316
TTP+ + TE GDA + T Q + P ++++ SK LLC+
Sbjct: 92 TTPAAEPLSCTEG-DGDATETLNPPQTTRQQNPPTITNETISKKLLCE 138
>SB_37853| Best HMM Match : REJ (HMM E-Value=0.00025)
Length = 2182
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 483 ECSYHGSRVFNDSQRQATKDAG-TISGLNVLRI 578
ECS+ GS+V N S+R DAG ++G++ RI
Sbjct: 678 ECSF-GSKVINSSKRITIYDAGFQVTGISPSRI 709
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,349,252
Number of Sequences: 59808
Number of extensions: 493912
Number of successful extensions: 1563
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1557
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -