BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30287 (358 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AK026442-1|BAB15484.1| 257|Homo sapiens protein ( Homo sapiens ... 29 3.2 >AK026442-1|BAB15484.1| 257|Homo sapiens protein ( Homo sapiens cDNA: FLJ22789 fis, clone KAIA2171. ). Length = 257 Score = 29.5 bits (63), Expect = 3.2 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +3 Query: 255 SKNKNGKVNHHLW*DCYTQILNEINGITIKKKKK 356 ++ +N K+ H W C+ Q ++NG+ KKKKK Sbjct: 213 AEERNRKLKKH-WKLCHAQSRLDVNGLAKKKKKK 245 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 40,482,014 Number of Sequences: 237096 Number of extensions: 659908 Number of successful extensions: 907 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 907 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 907 length of database: 76,859,062 effective HSP length: 81 effective length of database: 57,654,286 effective search space used: 2133208582 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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