Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30287
         (358 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT014656-1|AAT27280.1| 1006|Drosophila melanogaster LP21844p pro...    27   9.3  
AE014297-2361|AAS65164.1| 2046|Drosophila melanogaster CG31190-P...    27   9.3  
AE014297-2360|AAF55426.2| 2008|Drosophila melanogaster CG31190-P...    27   9.3  

>BT014656-1|AAT27280.1| 1006|Drosophila melanogaster LP21844p
           protein.
          Length = 1006

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +3

Query: 171 INQLDSEFYE*LKCNQIGIYCFLKYYCYSKNKNGKVNH 284
           I +   EFY  L    I      KY CY+ N   KVN+
Sbjct: 681 ITEKKEEFYSLLVFKDISARHSGKYTCYASNAAAKVNY 718


>AE014297-2361|AAS65164.1| 2046|Drosophila melanogaster CG31190-PB,
           isoform B protein.
          Length = 2046

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +3

Query: 171 INQLDSEFYE*LKCNQIGIYCFLKYYCYSKNKNGKVNH 284
           I +   EFY  L    I      KY CY+ N   KVN+
Sbjct: 681 ITEKKEEFYSLLVFKDISARHSGKYTCYASNAAAKVNY 718


>AE014297-2360|AAF55426.2| 2008|Drosophila melanogaster CG31190-PA,
           isoform A protein.
          Length = 2008

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +3

Query: 171 INQLDSEFYE*LKCNQIGIYCFLKYYCYSKNKNGKVNH 284
           I +   EFY  L    I      KY CY+ N   KVN+
Sbjct: 681 ITEKKEEFYSLLVFKDISARHSGKYTCYASNAAAKVNY 718


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,514,807
Number of Sequences: 53049
Number of extensions: 202944
Number of successful extensions: 369
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 369
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 880179048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)