Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30284
(536 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47; Eutel... 109 3e-23
UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-... 107 2e-22
UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal ... 106 3e-22
UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4; Eukary... 106 3e-22
UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1; ... 96 4e-19
UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4; Eukary... 89 6e-17
UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13; Eukaryota... 88 1e-16
UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=... 79 5e-14
UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4; Peziz... 79 5e-14
UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42; Euka... 77 3e-13
UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6; ... 73 3e-12
UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of cy... 73 6e-12
UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative; ... 72 7e-12
UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative; ... 72 7e-12
UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea... 71 2e-11
UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;... 66 5e-10
UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177, w... 62 8e-09
UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal ... 59 6e-08
UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lambl... 58 1e-07
UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostel... 58 1e-07
UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1; Enceph... 42 0.012
UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5; Therm... 41 0.016
UniRef50_Q012X7 Cluster: Phytoene/squalene synthetase; n=2; Ostr... 41 0.021
UniRef50_Q8TYY6 Cluster: 50S ribosomal protein L35Ae; n=2; Archa... 40 0.036
UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2; ... 40 0.048
UniRef50_A1RX00 Cluster: Ribosomal protein L35Ae; n=1; Thermofil... 39 0.084
UniRef50_A5BSA9 Cluster: Putative uncharacterized protein; n=1; ... 38 0.15
UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2; Desul... 37 0.34
UniRef50_Q3E325 Cluster: Rhomboid-like protein; n=2; Chloroflexu... 36 0.59
UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal ... 33 5.5
UniRef50_Q7X3Q6 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5
UniRef50_A4ALM4 Cluster: Phage-related integrase; n=1; marine ac... 33 5.5
UniRef50_A3TKF8 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5
UniRef50_Q9V414 Cluster: CG8954-PA, isoform A; n=3; Drosophila m... 33 5.5
UniRef50_Q29K85 Cluster: GA21432-PA; n=1; Drosophila pseudoobscu... 33 5.5
UniRef50_Q5QXQ3 Cluster: Uncharacterized conserved membrane prot... 32 9.6
UniRef50_Q0VN96 Cluster: Putative uncharacterized protein; n=1; ... 32 9.6
UniRef50_A3U2M0 Cluster: Putative lipid A biosynthesis lauroyl a... 32 9.6
UniRef50_Q1ERA3 Cluster: ATP-dependent RNA helicase; n=1; uncult... 32 9.6
>UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47;
Euteleostomi|Rep: 60S ribosomal protein L35a - Homo
sapiens (Human)
Length = 110
Score = 109 bits (263), Expect = 3e-23
Identities = 51/72 (70%), Positives = 56/72 (77%)
Frame = +1
Query: 253 FAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMG 432
+ GK C YVY+AK T PGG K K R IWGKVTR HGNSG VRAKF+SNLPA+A+G
Sbjct: 42 YLGKRCAYVYKAKNNTVTPGG---KPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIG 98
Query: 433 HRIRVMLYPSRI 468
HRIRVMLYPSRI
Sbjct: 99 HRIRVMLYPSRI 110
Score = 59.7 bits (138), Expect = 4e-08
Identities = 26/41 (63%), Positives = 33/41 (80%)
Frame = +2
Query: 137 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFLL 259
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ F L
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYL 43
>UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-PA
- Drosophila melanogaster (Fruit fly)
Length = 157
Score = 107 bits (256), Expect = 2e-22
Identities = 46/74 (62%), Positives = 59/74 (79%)
Frame = +1
Query: 247 SLFAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQA 426
S + GK CVYVY+A+ + +P P +KT++RA+WGKVTR HGN+G+VRA+F NLP A
Sbjct: 85 SFYVGKRCVYVYKAETKKCVPQHPE-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHA 143
Query: 427 MGHRIRVMLYPSRI 468
MGHRIR+MLYPSRI
Sbjct: 144 MGHRIRIMLYPSRI 157
Score = 70.1 bits (164), Expect = 3e-11
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = +2
Query: 131 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVF 253
RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ + F
Sbjct: 46 RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSF 86
>UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal
protein L35a; n=7; Euarchontoglires|Rep: PREDICTED:
similar to ribosomal protein L35a - Mus musculus
Length = 86
Score = 106 bits (255), Expect = 3e-22
Identities = 50/72 (69%), Positives = 55/72 (76%)
Frame = +1
Query: 253 FAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMG 432
+ GK C YVY+AK T PGG K K R IWGKVTR HGNS VRAKF+SNLPA+A+G
Sbjct: 18 YLGKRCAYVYKAKNNTMTPGG---KLNKTRMIWGKVTRAHGNSSMVRAKFRSNLPAKAIG 74
Query: 433 HRIRVMLYPSRI 468
HRIRVMLYPSRI
Sbjct: 75 HRIRVMLYPSRI 86
>UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4;
Eukaryota|Rep: Clone ZZZ247 mRNA sequence - Schistosoma
japonicum (Blood fluke)
Length = 128
Score = 106 bits (255), Expect = 3e-22
Identities = 49/72 (68%), Positives = 56/72 (77%)
Frame = +1
Query: 253 FAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMG 432
+ GK CVYVYRA+K+ P R K TK+R IWGK+ RPHGNSG VRA+FK NLPA AMG
Sbjct: 59 YLGKRCVYVYRAEKKKVFPR--RQKPTKIRVIWGKIMRPHGNSGIVRARFKHNLPASAMG 116
Query: 433 HRIRVMLYPSRI 468
RIRVMLYPSR+
Sbjct: 117 KRIRVMLYPSRV 128
Score = 66.1 bits (154), Expect = 5e-10
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +2
Query: 131 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFLLASIASMCTELRRGHQFP 310
R GRLY KA FTGY+RGLRNQHE+TALL+++G +R F L C + R +
Sbjct: 18 RPGRLYVKATFTGYRRGLRNQHESTALLRIDGVTERKSTEFYL---GKRCVYVYRAEKKK 74
Query: 311 EVPVAKKPS 337
P +KP+
Sbjct: 75 VFPRRQKPT 83
>UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1;
Diaphorina citri|Rep: Putative ribosomal protein L35Ae -
Diaphorina citri (Asian citrus psyllid)
Length = 172
Score = 96.3 bits (229), Expect = 4e-19
Identities = 44/72 (61%), Positives = 55/72 (76%)
Frame = +1
Query: 253 FAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMG 432
+ GK CV++Y+AK + P R K++LRAIWGKVTRPHG+SGSVRAKF NLPA MG
Sbjct: 103 YVGKRCVFLYKAKTKELKPHSKR--KSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMG 160
Query: 433 HRIRVMLYPSRI 468
++R+MLYPS I
Sbjct: 161 RKVRIMLYPSNI 172
Score = 62.5 bits (145), Expect = 6e-09
Identities = 27/46 (58%), Positives = 34/46 (73%)
Frame = +2
Query: 116 KASKPRHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVF 253
K + RHGRLYA+A+FTG+KRG RNQH NT+LL +E + DA F
Sbjct: 57 KRLRLRHGRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARF 102
>UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4;
Eukaryota|Rep: 60S ribosomal protein L35a -
Caenorhabditis elegans
Length = 124
Score = 89.0 bits (211), Expect = 6e-17
Identities = 41/72 (56%), Positives = 52/72 (72%)
Frame = +1
Query: 253 FAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMG 432
+AGK VY+Y+A +T G T+ RAIWGK+TRPHGN+G+VRAKF N+P A+G
Sbjct: 55 YAGKRVVYLYKAHNKTLKTG--HTVATRTRAIWGKITRPHGNAGAVRAKFHHNIPPSALG 112
Query: 433 HRIRVMLYPSRI 468
RIRV+LYPS I
Sbjct: 113 KRIRVLLYPSNI 124
Score = 64.1 bits (149), Expect = 2e-09
Identities = 29/49 (59%), Positives = 37/49 (75%)
Frame = +2
Query: 107 VLRKASKPRHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVF 253
V R+ S P GRLY KA+FTG+KRGLR Q E+T+LLK+EG ++ DA F
Sbjct: 6 VARRPSAPTTGRLYVKAIFTGFKRGLRTQSEHTSLLKLEGVFNKEDAGF 54
>UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13;
Eukaryota|Rep: Ribosomal protein L35A - Zea mays (Maize)
Length = 112
Score = 88.2 bits (209), Expect = 1e-16
Identities = 40/72 (55%), Positives = 52/72 (72%)
Frame = +1
Query: 253 FAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMG 432
+AGK Y+Y+AK ++ +T+ R IWGKVTRPHGNSG VRAKFKSNLP ++MG
Sbjct: 49 YAGKRMAYIYKAKTKS--------SETRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESMG 100
Query: 433 HRIRVMLYPSRI 468
++RV +YPS I
Sbjct: 101 RKVRVFMYPSSI 112
Score = 39.9 bits (89), Expect = 0.036
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 140 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVF 253
RLY + GYKR NQ+E T+L+++EG + D +
Sbjct: 11 RLYVRGTILGYKRSKSNQYETTSLVQIEGVNTKEDVAW 48
>UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=1;
Ciona intestinalis|Rep: Putative 60S ribosomal protein
L35a - Ciona intestinalis (Transparent sea squirt)
Length = 122
Score = 79.4 bits (187), Expect = 5e-14
Identities = 36/59 (61%), Positives = 44/59 (74%)
Frame = +1
Query: 253 FAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAM 429
+ GK C YVY+AK++T P RG+ K R IWGKVTR HGNSG VRA FK+NLPA+A+
Sbjct: 42 YLGKKCAYVYKAKRKTKTP---RGEPNKTRVIWGKVTRSHGNSGVVRATFKTNLPAKAI 97
Score = 61.3 bits (142), Expect = 1e-08
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = +2
Query: 140 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFLLASIASMCTELRRGHQFP 310
RL+ KAVFTGY RGLRNQHE+TALL++EG ++ D F L + + +R + P
Sbjct: 4 RLWCKAVFTGYTRGLRNQHEHTALLRIEGVTNKEDTDFYLGKKCAYVYKAKRKTKTP 60
>UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4;
Pezizomycotina|Rep: 60S ribosomal protein L35Ae -
Aspergillus fumigatus (Sartorya fumigata)
Length = 119
Score = 79.4 bits (187), Expect = 5e-14
Identities = 39/74 (52%), Positives = 50/74 (67%)
Frame = +1
Query: 247 SLFAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQA 426
+ + GK +VYRAK+ RG + +R IWGKVTRPHGNSG VRA+F+ NLP ++
Sbjct: 54 NFYLGKKVAFVYRAKREV------RG--SNIRVIWGKVTRPHGNSGVVRAQFRHNLPPKS 105
Query: 427 MGHRIRVMLYPSRI 468
G +RVMLYPS I
Sbjct: 106 FGATVRVMLYPSNI 119
>UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42;
Eukaryota|Rep: 60S ribosomal protein L33-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 107
Score = 77.0 bits (181), Expect = 3e-13
Identities = 38/72 (52%), Positives = 47/72 (65%)
Frame = +1
Query: 253 FAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMG 432
+ GK YVYRA K RG +K+R +WGKVTR HGNSG VRA F++NLPA+ G
Sbjct: 44 YLGKRIAYVYRASKEV------RG--SKIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFG 95
Query: 433 HRIRVMLYPSRI 468
+R+ LYPS I
Sbjct: 96 ASVRIFLYPSNI 107
Score = 32.7 bits (71), Expect = 5.5
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 140 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFLL 259
RLY K Y+R R + N +L+K+EG +A F L
Sbjct: 6 RLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYL 45
>UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein l35a, putative -
Leishmania major
Length = 144
Score = 73.3 bits (172), Expect = 3e-12
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Frame = +1
Query: 253 FAGKHCVYVYRAKK--RTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFK-SNLPAQ 423
+ GK YVY KK R +++ RA+WG+VTRPHGN+G +R KF +++PA
Sbjct: 70 YVGKRVCYVYHGKKVKRCVRWSKAPARRSTTRALWGRVTRPHGNAGMMRVKFNGASVPAS 129
Query: 424 AMGHRIRVMLYPSRI 468
A+G RIRV LYPS+I
Sbjct: 130 AIGRRIRVYLYPSQI 144
Score = 40.7 bits (91), Expect = 0.021
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +2
Query: 140 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVF 253
RLY K GY RGL Q + TAL++VE R DA +
Sbjct: 32 RLYMKGTLAGYTRGLHGQTKQTALVRVENVNTREDATW 69
>UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of
cytosolic 80S ribosome and 60S large subunit; n=1;
Ostreococcus lucimarinus CCE9901|Rep: Ribosomal protein
L35a, component of cytosolic 80S ribosome and 60S large
subunit - Ostreococcus lucimarinus CCE9901
Length = 109
Score = 72.5 bits (170), Expect = 6e-12
Identities = 36/74 (48%), Positives = 47/74 (63%)
Frame = +1
Query: 247 SLFAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQA 426
+ + GK YVY+AK + + T R IWGKV R HG SG VRAKFKS+LP+ +
Sbjct: 44 AFYGGKKLCYVYKAKTKK--------QGTAYRTIWGKVMRAHGTSGVVRAKFKSHLPSNS 95
Query: 427 MGHRIRVMLYPSRI 468
+G ++R MLYPS I
Sbjct: 96 IGGKVRCMLYPSNI 109
Score = 40.3 bits (90), Expect = 0.027
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 140 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVF 253
RLY + + GYKR NQ+ +T+L+K+EG D F
Sbjct: 8 RLYVRGLILGYKRARTNQYNHTSLIKLEGVSDAPSTAF 45
>UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative;
n=5; Plasmodium|Rep: 60S ribosomal protein L33-B,
putative - Plasmodium vivax
Length = 146
Score = 72.1 bits (169), Expect = 7e-12
Identities = 32/72 (44%), Positives = 45/72 (62%)
Frame = +1
Query: 253 FAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMG 432
+ GK YVYR K K++ IWGKV R HGNSG +RA+F++N+P +A G
Sbjct: 83 YVGKKIAYVYRTNKHHD--------GVKIKCIWGKVCRTHGNSGVIRARFRTNIPPKAFG 134
Query: 433 HRIRVMLYPSRI 468
R+R+++YPS I
Sbjct: 135 DRVRILMYPSNI 146
Score = 35.5 bits (78), Expect = 0.78
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 140 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVF 253
RLY K V GYKR RNQ N L+ + + A F
Sbjct: 45 RLYEKGVILGYKRSQRNQDPNFTLISIRNVHTKKHAQF 82
>UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative;
n=2; Filobasidiella neoformans|Rep: 60s ribosomal
protein l33-b, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 178
Score = 72.1 bits (169), Expect = 7e-12
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 5/124 (4%)
Frame = +1
Query: 112 SQSIKAPPRQAVR---KGRI--HRI*AWSTQPAREHRSPQG*RSKRP**CSLFAGKHCVY 276
S S+K + A R KGRI H+ +++P + +G +K + GK Y
Sbjct: 65 SASLKRLDKMASRLYIKGRILGHKRGKRNSRPNQSLLQIEGVDNKEA--AGHYLGKRVAY 122
Query: 277 VYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLY 456
VY+AK+ I G +++R IWG+++R HGNSG+V++KF++NLPA+ G R+ML+
Sbjct: 123 VYKAKRE--ING------SRVRVIWGRISRSHGNSGAVKSKFRTNLPAKTFGASCRIMLF 174
Query: 457 PSRI 468
PS I
Sbjct: 175 PSNI 178
>UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea
mays (Maize)
Length = 139
Score = 70.9 bits (166), Expect = 2e-11
Identities = 33/59 (55%), Positives = 42/59 (71%)
Frame = +1
Query: 253 FAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAM 429
+AGK Y+Y+AK ++ +T+ R IWGKVTRPHGNSG VRAKFKSNLP ++M
Sbjct: 69 YAGKRMAYIYKAKTKS--------SETRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESM 119
>UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L35Ae,
putative - Trichomonas vaginalis G3
Length = 102
Score = 66.1 bits (154), Expect = 5e-10
Identities = 27/40 (67%), Positives = 33/40 (82%)
Frame = +1
Query: 349 WGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 468
WG +T+PHGNSG VRAKF+ NLP Q +G ++RVMLYPS I
Sbjct: 63 WGVITQPHGNSGVVRAKFEKNLPPQMLGKQVRVMLYPSTI 102
>UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=9; Eukaryota|Rep:
Chromosome undetermined scaffold_177, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 129
Score = 62.1 bits (144), Expect = 8e-09
Identities = 29/69 (42%), Positives = 42/69 (60%)
Frame = +1
Query: 259 GKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHR 438
GK Y+Y+A TK RAIWG++++ HG++G V A+F NLP +A+G
Sbjct: 68 GKRVAYIYKAHSLK--------NNTKFRAIWGRISKSHGSNGVVTARFGRNLPPRAIGST 119
Query: 439 IRVMLYPSR 465
+RV LYP+R
Sbjct: 120 LRVFLYPNR 128
Score = 40.7 bits (91), Expect = 0.021
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +2
Query: 140 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKD 235
RL+ KAVFTG++R Q+EN ALLK+E D
Sbjct: 28 RLWVKAVFTGFRRSKVQQNENQALLKIEHVND 59
>UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein L35a - Macaca mulatta
Length = 80
Score = 59.3 bits (137), Expect = 6e-08
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = +1
Query: 364 RPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 468
+ HGNSG VRAKF+SNLPA+A+GH I+VMLYPS I
Sbjct: 46 KAHGNSGMVRAKFQSNLPAKAIGHGIQVMLYPSSI 80
Score = 52.0 bits (119), Expect = 8e-06
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +2
Query: 137 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFLL 259
GRL++KAVF GYKRG RNQ E+TALLK+E ++ F L
Sbjct: 3 GRLWSKAVFAGYKRGPRNQREHTALLKIEAVYAGDETEFYL 43
>UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_479_47445_47074 - Giardia lamblia
ATCC 50803
Length = 123
Score = 58.0 bits (134), Expect = 1e-07
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1
Query: 340 RAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRV 447
+ I+GK+ RPHGNSG VRA+F +NLP Q MGH++RV
Sbjct: 59 KPIFGKICRPHGNSGMVRARFYTNLPGQLMGHKVRV 94
Score = 35.9 bits (79), Expect = 0.59
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 137 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFLLASIASM 277
G+ + A+F GY+R Q EN AL+KV G R + +L + ++
Sbjct: 6 GKTFLPAIFVGYQRSRAKQRENVALVKVSGIYTRAETDKVLGRLIAI 52
>UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L35a -
Dictyostelium discoideum AX4
Length = 105
Score = 58.0 bits (134), Expect = 1e-07
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +1
Query: 349 WGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 468
WGK+ + HG+SG V+A+F NLP +AMG +RVMLYPS I
Sbjct: 66 WGKICKTHGSSGVVQARFARNLPPKAMGAPVRVMLYPSNI 105
Score = 42.7 bits (96), Expect = 0.005
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 140 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFLLASIASMCTELRRGHQFP 310
++Y+K V GY+R Q+ N +L+K+EG R D+ F L + +++ + + P
Sbjct: 3 KIYSKGVVLGYRRSQATQYPNISLIKIEGVVSREDSTFYLGKKVCLVSKVSKSAKNP 59
>UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L35A
- Encephalitozoon cuniculi
Length = 113
Score = 41.5 bits (93), Expect = 0.012
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +1
Query: 346 IWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLY 456
+ G +TR HGNSG+VRA+F NL + +G + V LY
Sbjct: 70 VHGVITRIHGNSGAVRARFTRNLDPKLLGTHVFVKLY 106
>UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5;
Thermococcaceae|Rep: 50S ribosomal protein L35Ae -
Pyrococcus abyssi
Length = 87
Score = 41.1 bits (92), Expect = 0.016
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 352 GKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVM 450
GK+ R HG G+VRA+F+ LP QA+G + ++
Sbjct: 55 GKIVRVHGTKGAVRARFEKGLPGQALGDYVEII 87
>UniRef50_Q012X7 Cluster: Phytoene/squalene synthetase; n=2;
Ostreococcus|Rep: Phytoene/squalene synthetase -
Ostreococcus tauri
Length = 437
Score = 40.7 bits (91), Expect = 0.021
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = -3
Query: 471 LDPGRIQHHSYSVSHSLGREVRLELGSDTARVAMWAGHLAPDSTQ 337
LD GR++H S+ + +GR+V LELG A + HLAPD ++
Sbjct: 332 LDVGRVKHASHLTADRVGRQVLLELGPHDAARPVRPSHLAPDRSE 376
>UniRef50_Q8TYY6 Cluster: 50S ribosomal protein L35Ae; n=2;
Archaea|Rep: 50S ribosomal protein L35Ae - Methanopyrus
kandleri
Length = 90
Score = 39.9 bits (89), Expect = 0.036
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +1
Query: 340 RAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 441
+ I GKV HGN+G+VR +F+ LP QA+G +
Sbjct: 54 KVIRGKVVDTHGNNGAVRVRFERGLPGQALGTEV 87
>UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Ajellomyces capsulatus NAm1
Length = 102
Score = 39.5 bits (88), Expect = 0.048
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 134 HG-RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFLLASIASMCTELRRGHQFP 310
HG RLY K Y+RG R + NT+L+K+EG +D A F L + +R Q
Sbjct: 5 HGHRLYVKGRHLSYQRGKRATNPNTSLIKLEGVEDIKAANFYLGKKVAFVYRAKREVQGS 64
Query: 311 EVPV 322
++ V
Sbjct: 65 KIRV 68
Score = 39.5 bits (88), Expect = 0.048
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +1
Query: 247 SLFAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSG----SVRAKFKSNL 414
+ + GK +VYRAK+ + +K+R IWGKVTR HG G +++ +F S
Sbjct: 44 NFYLGKKVAFVYRAKREV--------QGSKIRVIWGKVTRTHGQLGRCPCAIQTQFFSQS 95
Query: 415 PA 420
P+
Sbjct: 96 PS 97
>UniRef50_A1RX00 Cluster: Ribosomal protein L35Ae; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L35Ae - Thermofilum
pendens (strain Hrk 5)
Length = 85
Score = 38.7 bits (86), Expect = 0.084
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 352 GKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVM 450
GK+ R HG G V A FK +LP QA+G +++++
Sbjct: 53 GKIVRMHGRRGHVLAYFKRHLPGQAVGTKVKIV 85
>UniRef50_A5BSA9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 225
Score = 37.9 bits (84), Expect = 0.15
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = -3
Query: 429 HSLGREVRLELGSDTARVAMWAGHLAPDSTQL 334
H LGR++ LELGSD V + +G LAP +T++
Sbjct: 60 HGLGRQIGLELGSDNTTVTVRSGDLAPXATKV 91
>UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L35Ae -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 106
Score = 36.7 bits (81), Expect = 0.34
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +1
Query: 352 GKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 468
GK+ HG+ G V A FK NLP QA G V +YP I
Sbjct: 61 GKIVHVHGSKGVVIAVFKPNLPGQARGG--NVYIYPKGI 97
>UniRef50_Q3E325 Cluster: Rhomboid-like protein; n=2;
Chloroflexus|Rep: Rhomboid-like protein - Chloroflexus
aurantiacus J-10-fl
Length = 271
Score = 35.9 bits (79), Expect = 0.59
Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Frame = -3
Query: 435 VSHSLGREVRLELGSDTARVAMWAGHLAPDSTQLGFFATGTSGNWCPL---LSSVHIDAM 265
V + L R V E G + R + +A + +GF A G NW L LS + I
Sbjct: 170 VFYYLNRRVLGEFGQNQVRGIV---AIALINLLIGFAAQGVIDNWGHLGGLLSGIVIGVA 226
Query: 264 LASKKTASLRSFAPSTLRRAVFSCWL 187
LA + T LR F P +RR WL
Sbjct: 227 LAPRLTVDLRFFPPLFIRRFPMQGWL 252
>UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L35a - Rattus norvegicus
Length = 106
Score = 32.7 bits (71), Expect = 5.5
Identities = 21/51 (41%), Positives = 24/51 (47%)
Frame = +1
Query: 250 LFAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKF 402
L K C YVY+AK PG GK K R + GK P +G AKF
Sbjct: 61 LHLAKRCAYVYKAKISAVTPG---GKTNKTRVVRGKQLGP--RNGLFCAKF 106
>UniRef50_Q7X3Q6 Cluster: Putative uncharacterized protein; n=1;
Staphylococcus aureus|Rep: Putative uncharacterized
protein - Staphylococcus aureus
Length = 642
Score = 32.7 bits (71), Expect = 5.5
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 185 RNQHENTALLKVEGAKDRNDAVFLLASIASMCTELRRGHQFPEVPVA 325
R ++N+ LLK + KD N +FL I+ RG+ P+VP+A
Sbjct: 366 RTLYDNSRLLKSK-IKDNNKKIFLQHGISLATNVFERGYYNPKVPIA 411
>UniRef50_A4ALM4 Cluster: Phage-related integrase; n=1; marine
actinobacterium PHSC20C1|Rep: Phage-related integrase -
marine actinobacterium PHSC20C1
Length = 333
Score = 32.7 bits (71), Expect = 5.5
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -3
Query: 459 RIQHHS-YSVSHSLGREVRLELGSDTARVAMWAGHLAPDSTQ 337
R QH S +++ H+ + L+ G+D A +A+W GH +P +TQ
Sbjct: 253 RGQHISPHTLRHATAMHL-LQSGTDLATIALWLGHSSPATTQ 293
>UniRef50_A3TKF8 Cluster: Putative uncharacterized protein; n=1;
Janibacter sp. HTCC2649|Rep: Putative uncharacterized
protein - Janibacter sp. HTCC2649
Length = 255
Score = 32.7 bits (71), Expect = 5.5
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = -3
Query: 468 DPGRIQHHSYSVSHSLGREVRLELGSDTARVAMWAGHLAPDSTQLGFFATGTSGN-WCPL 292
D GR+ S VS + G E+RLE+ + V + + QL FA SG W +
Sbjct: 57 DDGRLDLGSLRVSGTEGMELRLEIDQEQQNVIAATAVVGESALQLQAFAAPRSGGLWAEI 116
Query: 291 LSSVHIDAMLASKKTASL 238
S + + A+ + TA L
Sbjct: 117 RSEIAV-AIESQGGTADL 133
>UniRef50_Q9V414 Cluster: CG8954-PA, isoform A; n=3; Drosophila
melanogaster|Rep: CG8954-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 1177
Score = 32.7 bits (71), Expect = 5.5
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +2
Query: 113 RKASKPRHGRLYAKAVFTGYKRGLRNQHENTA----LLKVEGAKDRNDAVFLLASIASMC 280
+++ RH + + F R LR Q +N + LLK+ DR+ +VFL IA C
Sbjct: 1054 KRSENVRHVIRWLEQEFKQGNRHLRAQRDNESQPLSLLKISRKMDRDASVFL--QIAQFC 1111
Query: 281 TELRRGHQFPEVPVAKK 331
L H P V +K
Sbjct: 1112 NHLVANHADPHVSELQK 1128
>UniRef50_Q29K85 Cluster: GA21432-PA; n=1; Drosophila
pseudoobscura|Rep: GA21432-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1210
Score = 32.7 bits (71), Expect = 5.5
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +2
Query: 113 RKASKPRHGRLYAKAVFTGYKRGLRNQHENTA----LLKVEGAKDRNDAVFLLASIASMC 280
+++ RH + + F R LR Q +N + LLK+ DR+ +VFL IA C
Sbjct: 1087 KRSENVRHVIRWLEQEFKHGNRHLRAQRDNESQPLSLLKISRKMDRDASVFL--QIAQFC 1144
Query: 281 TELRRGHQFPEVPVAKK 331
L H P V +K
Sbjct: 1145 NHLVANHADPHVSELQK 1161
>UniRef50_Q5QXQ3 Cluster: Uncharacterized conserved membrane
protein; n=3; Gammaproteobacteria|Rep: Uncharacterized
conserved membrane protein - Idiomarina loihiensis
Length = 345
Score = 31.9 bits (69), Expect = 9.6
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 289 KKRTPIPGGPRGKKTKLRA--IWGKVTRPHGNSGSVRAKFKSNLPAQAMG 432
KK P GP K+ K +WG+++ GN S+R K K+ A G
Sbjct: 261 KKLESQPAGPEEKERKNNPTYVWGEISDAKGNKKSMRVKVKNGYSLTAEG 310
>UniRef50_Q0VN96 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 204
Score = 31.9 bits (69), Expect = 9.6
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -3
Query: 417 REVRLELGSDTARVAMWAGHLAPDSTQLGFFAT 319
++VRL LG DT RV H AP +T+L F T
Sbjct: 94 KQVRLALGEDTQRVRRVILHTAPANTELQTFLT 126
>UniRef50_A3U2M0 Cluster: Putative lipid A biosynthesis lauroyl
acyltransferase; n=1; Oceanicola batsensis HTCC2597|Rep:
Putative lipid A biosynthesis lauroyl acyltransferase -
Oceanicola batsensis HTCC2597
Length = 304
Score = 31.9 bits (69), Expect = 9.6
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -1
Query: 464 LEGYSITRILCPIA-WAGRLDLNLARTLPELP 372
L G+ ++RI+ P+A W R+ NLA P+LP
Sbjct: 40 LAGWLVSRIVAPLAGWRRRIRTNLAHAWPDLP 71
>UniRef50_Q1ERA3 Cluster: ATP-dependent RNA helicase; n=1;
uncultured crenarchaeote 31-F-01|Rep: ATP-dependent RNA
helicase - uncultured crenarchaeote 31-F-01
Length = 589
Score = 31.9 bits (69), Expect = 9.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 153 RPYSQDISVVYATSTRTPLSSRLKEQKTVMMQSFCWQALRLCVQS 287
RPY QD + + T T TP+ R++E +QS + RL V S
Sbjct: 241 RPYIQDTKIEFVTITLTPVMRRIREHVERALQSRLEELKRLGVIS 285
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 493,672,524
Number of Sequences: 1657284
Number of extensions: 10461267
Number of successful extensions: 29054
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 28215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29036
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34156095254
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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