Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30283
(516 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41094 Cluster: 40S ribosomal protein S18; n=137; Eukar... 146 2e-34
UniRef50_P62269 Cluster: 40S ribosomal protein S18; n=58; Eukary... 139 4e-32
UniRef50_UPI00001C91B1 Cluster: PREDICTED: similar to ribosomal ... 106 3e-22
UniRef50_Q4V607 Cluster: IP07925p; n=3; Sophophora|Rep: IP07925p... 89 4e-17
UniRef50_UPI00006CC3CE Cluster: ribosomal protein S13p/S18e cont... 88 1e-16
UniRef50_Q8H583 Cluster: Ribosomal protein S18-like; n=1; Oryza ... 85 9e-16
UniRef50_Q7QRY7 Cluster: GLP_549_8004_7540; n=1; Giardia lamblia... 77 3e-13
UniRef50_A0EBZ1 Cluster: Chromosome undetermined scaffold_89, wh... 75 1e-12
UniRef50_A2E0E1 Cluster: Ribosomal protein S13p/S18e, putative; ... 71 2e-11
UniRef50_Q8SRP2 Cluster: 40S ribosomal protein S18; n=1; Encepha... 70 4e-11
UniRef50_Q8TRR2 Cluster: 30S ribosomal protein S13P; n=4; Euryar... 63 4e-09
UniRef50_Q0W1V6 Cluster: 30S ribosomal protein S13P; n=11; Archa... 61 1e-08
UniRef50_P54019 Cluster: 30S ribosomal protein S13P; n=9; Euryar... 61 2e-08
UniRef50_Q9HJD6 Cluster: 30S ribosomal protein S13P; n=4; Thermo... 58 9e-08
UniRef50_Q96YV7 Cluster: 30S ribosomal protein S13P; n=10; Archa... 55 1e-06
UniRef50_Q6LXN1 Cluster: 30S ribosomal protein S13P; n=4; Methan... 54 1e-06
UniRef50_Q3LW54 Cluster: Ribosomal protein S18; n=1; Bigelowiell... 54 3e-06
UniRef50_A4WM28 Cluster: 30S ribosomal protein S13P; n=2; Thermo... 52 6e-06
UniRef50_A0RY01 Cluster: 30S ribosomal protein S13P; n=2; Thermo... 52 6e-06
UniRef50_Q00861 Cluster: 30S ribosomal protein S13P; n=5; Haloba... 51 1e-05
UniRef50_Q9X1I5 Cluster: 30S ribosomal protein S13; n=14; Bacter... 49 6e-05
UniRef50_A7PUB9 Cluster: Chromosome chr7 scaffold_31, whole geno... 49 7e-05
UniRef50_A0SNY5 Cluster: SSU ribosomal protein S13AB; n=1; uncul... 45 9e-04
UniRef50_Q00VP7 Cluster: Chromosome 14 contig 1, DNA sequence; n... 44 0.002
UniRef50_Q74M95 Cluster: 30S ribosomal protein S13P; n=1; Nanoar... 40 0.025
UniRef50_UPI0001555DA0 Cluster: PREDICTED: similar to olfactory ... 40 0.034
UniRef50_A6RYD3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.55
UniRef50_Q7QRY8 Cluster: GLP_549_7513_8304; n=1; Giardia lamblia... 36 0.72
UniRef50_Q7PY55 Cluster: ENSANGP00000013280; n=4; Endopterygota|... 36 0.72
UniRef50_P46747 Cluster: Mitochondrial ribosomal protein S13; n=... 36 0.72
UniRef50_Q601J1 Cluster: 30S ribosomal protein S13; n=3; Mycopla... 36 0.72
UniRef50_UPI00004999F3 Cluster: hypothetical protein 23.t00039; ... 35 1.3
UniRef50_Q4WP11 Cluster: 40S ribosomal protein S13; n=5; Eurotio... 35 1.3
UniRef50_A1CXK9 Cluster: 40S ribosomal protein S13; n=7; Pezizom... 35 1.3
UniRef50_Q0QIP8 Cluster: Ribosomal protein S13; n=1; Oltmannsiel... 34 1.7
UniRef50_Q5B4R2 Cluster: Putative uncharacterized protein; n=1; ... 34 1.7
UniRef50_A6PT06 Cluster: Ribosomal protein S13; n=1; Victivallis... 34 2.2
UniRef50_O59772 Cluster: Mitochondrial ribosomal protein subunit... 34 2.2
UniRef50_O66486 Cluster: 30S ribosomal protein S13; n=28; cellul... 34 2.2
UniRef50_Q98JF7 Cluster: Mll1963 protein; n=1; Mesorhizobium lot... 33 2.9
UniRef50_A5FGA8 Cluster: DNA-(Apurinic or apyrimidinic site) lya... 33 2.9
UniRef50_Q9TCB7 Cluster: Ribosomal protein S13; n=1; Nephroselmi... 33 2.9
UniRef50_O21258 Cluster: Ribosomal protein S13; n=1; Reclinomona... 33 3.9
UniRef50_Q6CFI9 Cluster: Yarrowia lipolytica chromosome B of str... 33 3.9
UniRef50_Q8W9S0 Cluster: Ribosomal protein S13; n=1; Mesostigma ... 33 5.1
UniRef50_A5K357 Cluster: Putative uncharacterized protein; n=2; ... 32 6.8
UniRef50_Q5NQ42 Cluster: 30S ribosomal protein S13; n=107; cellu... 32 6.8
UniRef50_P42732 Cluster: 30S ribosomal protein S13, chloroplast ... 32 6.8
UniRef50_Q7RQE1 Cluster: Protein factor associated with neutral-... 32 8.9
UniRef50_P15758 Cluster: Mitochondrial ribosomal protein S13; n=... 32 8.9
UniRef50_Q2JL76 Cluster: 30S ribosomal protein S13; n=212; cellu... 32 8.9
UniRef50_Q8FS35 Cluster: 30S ribosomal protein S13; n=42; Bacter... 32 8.9
>UniRef50_P41094 Cluster: 40S ribosomal protein S18; n=137;
Eukaryota|Rep: 40S ribosomal protein S18 - Drosophila
melanogaster (Fruit fly)
Length = 152
Score = 146 bits (355), Expect = 2e-34
Identities = 68/79 (86%), Positives = 75/79 (94%)
Frame = +2
Query: 17 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 196
MSLVIP+KFQHILRIMNTNIDGKRKV AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1 MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 197 EEEVEKIITIMSNPRQYKI 253
EEEV+K++TI+SNP QYK+
Sbjct: 61 EEEVDKVVTIISNPLQYKV 79
Score = 114 bits (274), Expect = 1e-24
Identities = 49/55 (89%), Positives = 54/55 (98%)
Frame = +1
Query: 256 DWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 420
+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RHYWGLRVRGQH
Sbjct: 81 NWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQH 135
>UniRef50_P62269 Cluster: 40S ribosomal protein S18; n=58;
Eukaryota|Rep: 40S ribosomal protein S18 - Homo sapiens
(Human)
Length = 152
Score = 139 bits (336), Expect = 4e-32
Identities = 62/79 (78%), Positives = 75/79 (94%)
Frame = +2
Query: 17 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 196
MSLVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE T
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 197 EEEVEKIITIMSNPRQYKI 253
E+EVE++ITIM NPRQYKI
Sbjct: 61 EDEVERVITIMQNPRQYKI 79
Score = 107 bits (258), Expect = 1e-22
Identities = 45/55 (81%), Positives = 52/55 (94%)
Frame = +1
Query: 256 DWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 420
DWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+WGLRVRGQH
Sbjct: 81 DWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQH 135
>UniRef50_UPI00001C91B1 Cluster: PREDICTED: similar to ribosomal
protein S18; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S18 - Rattus norvegicus
Length = 170
Score = 106 bits (254), Expect = 3e-22
Identities = 48/79 (60%), Positives = 66/79 (83%)
Frame = +2
Query: 17 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 196
MSLVI +K QHIL+++NTNID +++ FA+TA KG +RY+++VL+KA IDL K AGE T
Sbjct: 1 MSLVISEKSQHILQVLNTNIDEQQETAFAITATKGAEQRYAHVVLRKAGIDLTKMAGELT 60
Query: 197 EEEVEKIITIMSNPRQYKI 253
E++VE++ITIM NPRQY+I
Sbjct: 61 EDKVERVITIMQNPRQYEI 79
Score = 72.1 bits (169), Expect = 7e-12
Identities = 31/48 (64%), Positives = 40/48 (83%)
Frame = +1
Query: 274 QKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
QK + DG+ SQ+ ++ LD+KLRE+LERLKKIRAHRG+RH+WGL V Q
Sbjct: 81 QKGVRDGRCSQVPANGLDNKLREELERLKKIRAHRGLRHFWGLHVHCQ 128
>UniRef50_Q4V607 Cluster: IP07925p; n=3; Sophophora|Rep: IP07925p -
Drosophila melanogaster (Fruit fly)
Length = 246
Score = 89.4 bits (212), Expect = 4e-17
Identities = 39/47 (82%), Positives = 45/47 (95%)
Frame = +2
Query: 113 IKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKI 253
IKGVGRRYSNIVLKKAD+DL KRAGECTEEEV+K++TI+SNP QYK+
Sbjct: 1 IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKV 47
>UniRef50_UPI00006CC3CE Cluster: ribosomal protein S13p/S18e
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: ribosomal protein S13p/S18e containing
protein - Tetrahymena thermophila SB210
Length = 155
Score = 88.2 bits (209), Expect = 1e-16
Identities = 36/54 (66%), Positives = 45/54 (83%)
Frame = +1
Query: 259 WFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 420
W LNR D DGK Q+ S+ LD+K+REDLERLKKI++HRG+RH+WGL+VRGQH
Sbjct: 84 WLLNRINDFKDGKNYQMASNTLDTKMREDLERLKKIKSHRGLRHFWGLKVRGQH 137
Score = 72.5 bits (170), Expect = 5e-12
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Frame = +2
Query: 17 MSLVIPDK--FQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGE 190
MS VI + F++I RI+NTNIDGKR A+T I+G+GRR++ I+ K ID + RAG
Sbjct: 1 MSFVIEKESDFKYIHRILNTNIDGKRITPIALTGIRGIGRRFAYIICKVLKIDPNARAGL 60
Query: 191 CTEEEVEKIITIMSNPRQYKIQT 259
TE++ KI ++++P + I T
Sbjct: 61 LTEDQCNKITDLIADPEAHGIPT 83
>UniRef50_Q8H583 Cluster: Ribosomal protein S18-like; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Ribosomal protein
S18-like - Oryza sativa subsp. japonica (Rice)
Length = 145
Score = 85.0 bits (201), Expect = 9e-16
Identities = 36/50 (72%), Positives = 44/50 (88%)
Frame = +1
Query: 271 RQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 420
++KD DG++SQ+ S+ LD KLR+DLERLKKIR HRG+RHYWGLRVRGQH
Sbjct: 79 QKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH 128
>UniRef50_Q7QRY7 Cluster: GLP_549_8004_7540; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_549_8004_7540 - Giardia lamblia ATCC
50803
Length = 154
Score = 76.6 bits (180), Expect = 3e-13
Identities = 33/78 (42%), Positives = 55/78 (70%)
Frame = +2
Query: 20 SLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTE 199
++V P+ ++ +LR+ NTNI GK + A+ IKG+GRR++N+ LKKA+ID+ KRAGE T
Sbjct: 3 TIVQPNDYRDLLRMFNTNIQGKVVLECALVGIKGIGRRFANVALKKANIDVHKRAGELTA 62
Query: 200 EEVEKIITIMSNPRQYKI 253
E + ++ ++ +P + I
Sbjct: 63 AEEDALMKVLEDPLSHGI 80
Score = 58.4 bits (135), Expect = 9e-08
Identities = 26/54 (48%), Positives = 33/54 (61%)
Frame = +1
Query: 259 WFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 420
W LNR D GK + + + S R DLERL+K R RG+RH+ L+VRGQH
Sbjct: 83 WMLNRNNDFESGKDMHILVNTIASTHRADLERLRKTRCERGVRHHHNLKVRGQH 136
>UniRef50_A0EBZ1 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_89,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 193
Score = 74.9 bits (176), Expect = 1e-12
Identities = 35/79 (44%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Frame = +2
Query: 17 MSLVIP--DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGE 190
MSLV+ D+F+ I+RI+NTN+DGK+++ + + +IKG+GRR++ + K ++L KRAGE
Sbjct: 1 MSLVLEKADQFRQIIRILNTNVDGKQQMAYEIRSIKGIGRRFAIQICKVLRLNLTKRAGE 60
Query: 191 CTEEEVEKIITIMSNPRQY 247
T+EE KI ++ QY
Sbjct: 61 LTDEEAHKITEVIKMVPQY 79
Score = 50.8 bits (116), Expect = 2e-05
Identities = 22/45 (48%), Positives = 36/45 (80%), Gaps = 2/45 (4%)
Frame = +1
Query: 277 KDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG--MRHYWGLR 405
+D+ +GK ++T++ L++KLREDLER+KKI+ + +RH+WGLR
Sbjct: 81 RDLKNGKNYEVTTNELETKLREDLERIKKIKYSQWLCLRHHWGLR 125
>UniRef50_A2E0E1 Cluster: Ribosomal protein S13p/S18e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S13p/S18e, putative - Trichomonas vaginalis G3
Length = 155
Score = 70.5 bits (165), Expect = 2e-11
Identities = 29/74 (39%), Positives = 54/74 (72%)
Frame = +2
Query: 32 PDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVE 211
P F+ ++R+++TN+DG+R + A+T I G+GRR++ V+++A +D +RAG T +E E
Sbjct: 8 PAAFRDMVRMLSTNVDGRRPLYLALTNISGIGRRFAYAVVRRAGLDPLRRAGTLTPKEEE 67
Query: 212 KIITIMSNPRQYKI 253
I++I+ NP +++I
Sbjct: 68 LIVSIIQNPTEHQI 81
Score = 54.8 bits (126), Expect = 1e-06
Identities = 23/53 (43%), Positives = 37/53 (69%)
Frame = +1
Query: 259 WFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
W LNR+ D G+ + +++L + +R ++ER+KK+R RG+RH GL+VRGQ
Sbjct: 84 WMLNRRFDRATGQNTHWVATDLSANIRAEIERMKKMRMKRGIRHGLGLKVRGQ 136
>UniRef50_Q8SRP2 Cluster: 40S ribosomal protein S18; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S18
- Encephalitozoon cuniculi
Length = 153
Score = 69.7 bits (163), Expect = 4e-11
Identities = 31/69 (44%), Positives = 49/69 (71%)
Frame = +2
Query: 32 PDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVE 211
P + Q+I+RI NTNIDG +++ FA+T I+G+G R + + K+ IDL KRAGE E+E++
Sbjct: 7 PAEVQYIVRIHNTNIDGTKRIPFALTKIRGIGIRIATAICKRLGIDLRKRAGEMGEDEMK 66
Query: 212 KIITIMSNP 238
+I + +P
Sbjct: 67 RISDAILDP 75
Score = 47.2 bits (107), Expect = 2e-04
Identities = 24/52 (46%), Positives = 33/52 (63%)
Frame = +1
Query: 262 FLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
++N Q+DI+DG S L + LD+ LR +ER KK + R R GL+VRGQ
Sbjct: 84 YMNHQRDIIDGTTSHLIGTRLDADLRMMIERGKKNKRIRAYRLDVGLKVRGQ 135
>UniRef50_Q8TRR2 Cluster: 30S ribosomal protein S13P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S13P -
Methanosarcina acetivorans
Length = 162
Score = 62.9 bits (146), Expect = 4e-09
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = +1
Query: 259 WFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
W LNRQKD+ G+ L +++ RED+ LKK+RA+RG+RH GL+VRGQ
Sbjct: 92 WMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVRGQ 144
Score = 57.6 bits (133), Expect = 2e-07
Identities = 25/63 (39%), Positives = 41/63 (65%)
Frame = +2
Query: 35 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 214
++ +H++RIMNT++ G + V +A+T + GVGRR + ++ K A +D G EEEV K
Sbjct: 18 EELRHLVRIMNTDLQGAKPVQYALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVAK 77
Query: 215 IIT 223
+ T
Sbjct: 78 LDT 80
>UniRef50_Q0W1V6 Cluster: 30S ribosomal protein S13P; n=11;
Archaea|Rep: 30S ribosomal protein S13P - Uncultured
methanogenic archaeon RC-I
Length = 224
Score = 61.3 bits (142), Expect = 1e-08
Identities = 26/67 (38%), Positives = 44/67 (65%)
Frame = +2
Query: 35 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 214
D+ ++I+RI NT++DG + V FA+T IKG+G R S I+ ++A +D G E+V+K
Sbjct: 67 DEIKYIVRIANTDLDGTQTVEFALTGIKGIGNRISKIIARQAQVDPHATMGYLPPEQVDK 126
Query: 215 IITIMSN 235
+ ++ N
Sbjct: 127 LRAVIDN 133
Score = 53.6 bits (123), Expect = 3e-06
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = +1
Query: 259 WFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
W LNR++DI G+ L +L ++ED+ +KKIR+++G+RH G +VRGQ
Sbjct: 141 WMLNRRRDIYTGEDKHLYGVDLTMAVKEDINIMKKIRSYKGIRHERGQKVRGQ 193
>UniRef50_P54019 Cluster: 30S ribosomal protein S13P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S13P -
Methanococcus jannaschii
Length = 150
Score = 60.9 bits (141), Expect = 2e-08
Identities = 25/72 (34%), Positives = 50/72 (69%)
Frame = +2
Query: 38 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 217
+F++++R+ T++DG +K++ A+ I GVG + +++ A +D +K AG TEEEV+KI
Sbjct: 5 EFKYLIRVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKI 64
Query: 218 ITIMSNPRQYKI 253
++++P ++ I
Sbjct: 65 EEVLADPAKFGI 76
Score = 54.0 bits (124), Expect = 2e-06
Identities = 25/53 (47%), Positives = 34/53 (64%)
Frame = +1
Query: 259 WFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
W NR+KD V G+ + S+L +ED+ RLK+IR +RG+RH GL RGQ
Sbjct: 79 WMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPCRGQ 131
>UniRef50_Q9HJD6 Cluster: 30S ribosomal protein S13P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S13P -
Thermoplasma acidophilum
Length = 171
Score = 58.4 bits (135), Expect = 9e-08
Identities = 22/59 (37%), Positives = 43/59 (72%)
Frame = +2
Query: 41 FQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 217
FQ+I+RI N +++G+R + A++ +KG+G R ++ ++ D+ +DK+ GE EE++EK+
Sbjct: 28 FQYIVRIANKDLNGERLLPLALSDLKGIGERLGYVIAERLDLPIDKKIGELKEEQLEKL 86
Score = 56.4 bits (130), Expect = 4e-07
Identities = 23/54 (42%), Positives = 40/54 (74%)
Frame = +1
Query: 256 DWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
+W LN +++ V GK L S++L+ +++ED+ +KKIR+++G+RH G +VRGQ
Sbjct: 99 EWLLNHRREPVTGKNLNLVSTDLEIQVQEDINLMKKIRSYKGIRHEKGKKVRGQ 152
>UniRef50_Q96YV7 Cluster: 30S ribosomal protein S13P; n=10;
Archaea|Rep: 30S ribosomal protein S13P - Sulfolobus
tokodaii
Length = 172
Score = 54.8 bits (126), Expect = 1e-06
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1
Query: 256 DWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
+W NR+KD G L +S+L +R D+ER KKI++ RG+RH GL+VRGQ
Sbjct: 79 NWMYNRRKDYESGIDMHLVTSDLIFYVRNDIEREKKIKSWRGVRHSLGLKVRGQ 132
Score = 54.4 bits (125), Expect = 1e-06
Identities = 20/68 (29%), Positives = 45/68 (66%)
Frame = +2
Query: 38 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 217
+F++I+R+ ++DG KV +A+ +KG+G + ++ K +D D+R GE ++E+++KI
Sbjct: 6 QFKYIVRLFGQDVDGTMKVPYALAMVKGIGYNTARAIVFKLGLDKDRRLGELSDEDIKKI 65
Query: 218 ITIMSNPR 241
+++ +
Sbjct: 66 ENYLTDKK 73
>UniRef50_Q6LXN1 Cluster: 30S ribosomal protein S13P; n=4;
Methanococcus|Rep: 30S ribosomal protein S13P -
Methanococcus maripaludis
Length = 149
Score = 54.4 bits (125), Expect = 1e-06
Identities = 22/72 (30%), Positives = 47/72 (65%)
Frame = +2
Query: 38 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 217
+F+H +RI T+++GK + +A+ +KG+GR + V++ ++D ++AG +E+V KI
Sbjct: 5 EFKHRIRISKTDLEGKNPLEYALQDMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKI 64
Query: 218 ITIMSNPRQYKI 253
+++ +P + I
Sbjct: 65 ESVLEDPATHGI 76
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +1
Query: 259 WFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
W NR+KD+ G L ++L ++ED+ +KKIR ++G+RH L RGQ
Sbjct: 79 WMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYKGIRHELRLPCRGQ 131
>UniRef50_Q3LW54 Cluster: Ribosomal protein S18; n=1; Bigelowiella
natans|Rep: Ribosomal protein S18 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 159
Score = 53.6 bits (123), Expect = 3e-06
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +1
Query: 259 WFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 420
W +NR+ D + G + S+ LDS L+ED++RL I+ ++G+RH L+ RGQH
Sbjct: 88 WLMNRRADFLTGDNLHVLSTVLDSALQEDIKRLVTIKNNKGLRHLSRLKTRGQH 141
Score = 39.5 bits (88), Expect = 0.045
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = +2
Query: 35 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 214
+K +RI + NI+G F + IKGVG R SN++ K D++ + + ++E+
Sbjct: 13 EKSMTFIRIFDCNINGSLSCNFGLRNIKGVGIRMSNVLRKILKKDINYKLYNIEKADLEE 72
Query: 215 IITI 226
++ I
Sbjct: 73 VVNI 76
>UniRef50_A4WM28 Cluster: 30S ribosomal protein S13P; n=2;
Thermoproteaceae|Rep: 30S ribosomal protein S13P -
Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321)
Length = 152
Score = 52.4 bits (120), Expect = 6e-06
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +1
Query: 259 WFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
WFLNR+KD G+ L S L + D++ +KK+++ +G+RH GL+VRGQ
Sbjct: 77 WFLNRRKDPETGRDMHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKVRGQ 129
Score = 37.1 bits (82), Expect = 0.24
Identities = 16/56 (28%), Positives = 33/56 (58%)
Frame = +2
Query: 50 ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 217
I+R+ +T+++G ++V +A+ I+G+G + + K ID G EE++ K+
Sbjct: 8 IVRVGDTDLEGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAVLGALPEEQINKL 63
>UniRef50_A0RY01 Cluster: 30S ribosomal protein S13P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S13P -
Cenarchaeum symbiosum
Length = 227
Score = 52.4 bits (120), Expect = 6e-06
Identities = 22/53 (41%), Positives = 37/53 (69%)
Frame = +1
Query: 259 WFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
WFLNR+KD+ G+ + +S+++ +R D+ER + + +G RH +GL+VRGQ
Sbjct: 124 WFLNRRKDLETGEDRHIFTSDIEFTVRNDVERERVSGSWKGYRHMFGLKVRGQ 176
Score = 46.8 bits (106), Expect = 3e-04
Identities = 18/67 (26%), Positives = 40/67 (59%)
Frame = +2
Query: 38 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 217
+++HI+RI+ ++ G++K + + I+G+G ++ +L ID + G T+E+V I
Sbjct: 50 EYKHIVRILGNDLPGEKKAVVGLRQIRGIGYGFATAILDVLKIDNNSNIGYLTDEQVASI 109
Query: 218 ITIMSNP 238
++ +P
Sbjct: 110 EKLLQDP 116
>UniRef50_Q00861 Cluster: 30S ribosomal protein S13P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S13P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 51.2 bits (117), Expect = 1e-05
Identities = 22/54 (40%), Positives = 34/54 (62%)
Frame = +1
Query: 256 DWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
+W N QKD G+ + T ++L R+D+ R+K I ++RG+RH G +VRGQ
Sbjct: 91 EWMTNHQKDYFTGETTHETGNDLQLTRRQDINRMKMIDSYRGVRHKRGQKVRGQ 144
Score = 48.0 bits (109), Expect = 1e-04
Identities = 19/67 (28%), Positives = 41/67 (61%)
Frame = +2
Query: 35 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 214
+ ++ +RI T++DG + V A+T + G+G R + I+ +KAD+D G+ ++ +E+
Sbjct: 18 EDIRYFVRIGQTDLDGTKSVERALTELNGIGHRAARIIAQKADVDRRAVFGKLDDDVIER 77
Query: 215 IITIMSN 235
++ + N
Sbjct: 78 VVERVEN 84
>UniRef50_Q9X1I5 Cluster: 30S ribosomal protein S13; n=14;
Bacteria|Rep: 30S ribosomal protein S13 - Thermotoga
maritima
Length = 125
Score = 49.2 bits (112), Expect = 6e-05
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +2
Query: 56 RIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 217
RI+ + +KV A+T I G+GR S +LK ID +KR G+ T+EE+ KI
Sbjct: 3 RIVGVELPNNKKVWVALTYIYGIGRSRSFEILKNTGIDPEKRVGDLTDEEISKI 56
Score = 32.7 bits (71), Expect = 5.1
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 322 LDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
L S++ ++ RL +I +RG+RH GL VRGQ
Sbjct: 70 LRSEVERNIRRLIEIGCYRGIRHKLGLPVRGQ 101
>UniRef50_A7PUB9 Cluster: Chromosome chr7 scaffold_31, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_31, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 48
Score = 48.8 bits (111), Expect = 7e-05
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +1
Query: 7 LNQNVAGHSRQISTYSSYHEYEHRWQTQGYVCDDGYQRCWP 129
L+ +V G R IST++S ++E RW+T+ +VC D +QR WP
Sbjct: 5 LSMSVLGSERGISTHTSCAQHERRWETEDHVCSDLHQRYWP 45
>UniRef50_A0SNY5 Cluster: SSU ribosomal protein S13AB; n=1;
uncultured euryarchaeote ARMAN-2|Rep: SSU ribosomal
protein S13AB - uncultured euryarchaeote ARMAN-2
Length = 177
Score = 45.2 bits (102), Expect = 9e-04
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +1
Query: 259 WFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 420
+ LNR+ D+ GK L ++L +R+ + R +R RG RH +G +VRGQH
Sbjct: 93 YLLNRRNDMDTGKDMHLIGNDLIFAVRQSINRDVTLRVWRGYRHQYGQKVRGQH 146
>UniRef50_Q00VP7 Cluster: Chromosome 14 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 14 contig 1, DNA
sequence - Ostreococcus tauri
Length = 272
Score = 44.0 bits (99), Expect = 0.002
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = -1
Query: 420 VLTTHTKAPVMSHPSVSANLLEPLQIFTEF*IQVGGGQLAVFTINNILLPI*EPV 256
VLTT T APV+S SV +NLL+ L++ + +++ G L I I+L + EP+
Sbjct: 44 VLTTDTDAPVVSQTSVVSNLLQTLEVVAQLRVELVGHHLRELAILEIVLAVQEPI 98
>UniRef50_Q74M95 Cluster: 30S ribosomal protein S13P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S13P -
Nanoarchaeum equitans
Length = 153
Score = 40.3 bits (90), Expect = 0.025
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +1
Query: 259 WFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
W NR++D GK L ++ + D++R +I + RG RH GL VRGQ
Sbjct: 83 WLYNRRRDPETGKDLHLVGNDYKITMEFDIKREMQINSWRGYRHREGLPVRGQ 135
Score = 39.5 bits (88), Expect = 0.045
Identities = 18/68 (26%), Positives = 37/68 (54%)
Frame = +2
Query: 50 ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIM 229
I+ I + ++DG + + + + GV +++ V ID ++ G ++EE+EK+ +
Sbjct: 13 IVHIADVDLDGHKPIYVELRKVVGVNWMFAHAVCAALGIDKWRKIGSLSDEELEKLEDAL 72
Query: 230 SNPRQYKI 253
NP +Y I
Sbjct: 73 RNPWKYGI 80
>UniRef50_UPI0001555DA0 Cluster: PREDICTED: similar to olfactory
specific medium-chain acyl CoA synthetase; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
olfactory specific medium-chain acyl CoA synthetase -
Ornithorhynchus anatinus
Length = 176
Score = 39.9 bits (89), Expect = 0.034
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +1
Query: 256 DWFLNRQKDIVDGKYSQL 309
DWFLNRQKD+ DGKYSQ+
Sbjct: 11 DWFLNRQKDVKDGKYSQV 28
>UniRef50_A6RYD3 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 82
Score = 35.9 bits (79), Expect = 0.55
Identities = 14/35 (40%), Positives = 26/35 (74%)
Frame = +1
Query: 316 SNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 420
+ L +L++++ER++ + ++RG RH GL VRGQ+
Sbjct: 5 TELKRRLQDNIERMRTMGSYRGRRHAMGLPVRGQN 39
>UniRef50_Q7QRY8 Cluster: GLP_549_7513_8304; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_549_7513_8304 - Giardia lamblia ATCC
50803
Length = 263
Score = 35.5 bits (78), Expect = 0.72
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -3
Query: 196 CAFASTLVKINVGFFENNVGVPPANTFDSRHRKHNLAFAIDVRIHDTKNMLKFV-WNDQR 20
C S V +NVGF E N+G N +S A+DV + T+ + V ND+
Sbjct: 104 CELTSAFVNVNVGFLEGNIGKAAPNPLNSDKGTLKYDLALDVCVKHTQEVPVVVGLNDRC 163
Query: 19 H 17
H
Sbjct: 164 H 164
>UniRef50_Q7PY55 Cluster: ENSANGP00000013280; n=4;
Endopterygota|Rep: ENSANGP00000013280 - Anopheles
gambiae str. PEST
Length = 183
Score = 35.5 bits (78), Expect = 0.72
Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +2
Query: 74 IDGKRKVMFAMTAIKGVGRRYSNIVLK---KADI-DLDKRAGECTEEEVEK 214
+D K KV A G+GR +S +LK K I DLD AGE T EE+EK
Sbjct: 1 MDLKNKVALVTGAATGLGRAFSEELLKHGAKVVICDLDSDAGELTVEELEK 51
>UniRef50_P46747 Cluster: Mitochondrial ribosomal protein S13; n=1;
Prototheca wickerhamii|Rep: Mitochondrial ribosomal
protein S13 - Prototheca wickerhamii
Length = 119
Score = 35.5 bits (78), Expect = 0.72
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 310 TSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
T S++ R++++RL I ++RG RH GL VRGQ
Sbjct: 66 TGSDVRRFTRQNIQRLVNIHSYRGYRHIQGLPVRGQ 101
>UniRef50_Q601J1 Cluster: 30S ribosomal protein S13; n=3; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S13 -
Mycoplasma hyopneumoniae (strain 232)
Length = 137
Score = 35.5 bits (78), Expect = 0.72
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +1
Query: 310 TSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
T +L +++ +++RL +I+ +RG+RH GL VRGQ
Sbjct: 78 TEGDLHREVQSNIKRLIEIKCYRGIRHRKGLPVRGQ 113
>UniRef50_UPI00004999F3 Cluster: hypothetical protein 23.t00039;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 23.t00039 - Entamoeba histolytica HM-1:IMSS
Length = 592
Score = 34.7 bits (76), Expect = 1.3
Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Frame = -1
Query: 366 NLLEPLQIFTEF*IQVGGGQLAVFTINNIL-LPI*EPVCILYCLGF--DMIVIIFST--- 205
NL + LQ T F I G F I +L L I P+ + + + I IF +
Sbjct: 312 NLYQQLQYSTHFYIPSGLTSYINFPIIILLILAITAPIILFILISIIPESICYIFKSYTD 371
Query: 204 SSSVHSPARLSRSMSAFLRTMLEYLRPTPLIAV----IANITLRLPSMFVF 64
SSS SP +L FL T E PT + V I + TL +P +F+F
Sbjct: 372 SSSKSSPKQLMVLSDIFLSTKTEISHPTTIYLVIFYFILSTTLYIPYLFLF 422
>UniRef50_Q4WP11 Cluster: 40S ribosomal protein S13; n=5;
Eurotiomycetidae|Rep: 40S ribosomal protein S13 -
Aspergillus fumigatus (Sartorya fumigata)
Length = 169
Score = 34.7 bits (76), Expect = 1.3
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +1
Query: 316 SNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
++L ++ +D++RLK+ ++RG RH GL VRGQ
Sbjct: 103 NDLRRQILDDIKRLKESGSYRGRRHALGLPVRGQ 136
>UniRef50_A1CXK9 Cluster: 40S ribosomal protein S13; n=7;
Pezizomycotina|Rep: 40S ribosomal protein S13 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 118
Score = 34.7 bits (76), Expect = 1.3
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +1
Query: 316 SNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
++L ++ +D++RLK+ ++RG RH GL VRGQ
Sbjct: 66 NDLRRQILDDIKRLKESGSYRGRRHALGLPVRGQ 99
>UniRef50_Q0QIP8 Cluster: Ribosomal protein S13; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S13 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 117
Score = 34.3 bits (75), Expect = 1.7
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 331 KLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
K RE+++RL +I ++RG RH GL RGQ
Sbjct: 72 KKRENIQRLVRISSYRGFRHTAGLPCRGQ 100
>UniRef50_Q5B4R2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 130
Score = 34.3 bits (75), Expect = 1.7
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 316 SNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
++L ++ +D++RLK+ +RG RH GL VRGQ
Sbjct: 65 NDLRRQVLDDIKRLKETGTYRGRRHALGLPVRGQ 98
>UniRef50_A6PT06 Cluster: Ribosomal protein S13; n=1; Victivallis
vadensis ATCC BAA-548|Rep: Ribosomal protein S13 -
Victivallis vadensis ATCC BAA-548
Length = 131
Score = 33.9 bits (74), Expect = 2.2
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 307 LTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
L +L L D+ RL++I +RG+RH L VRGQ
Sbjct: 65 LVEGDLRRTLAADIRRLQQINCYRGIRHRRSLPVRGQ 101
>UniRef50_O59772 Cluster: Mitochondrial ribosomal protein subunit
S37; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S37 - Schizosaccharomyces
pombe (Fission yeast)
Length = 151
Score = 33.9 bits (74), Expect = 2.2
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 343 DLERLKKIRAHRGMRHYWGLRVRGQH 420
D+ RL IR +RGMRH GL V GQ+
Sbjct: 76 DISRLVNIRCYRGMRHVNGLPVNGQN 101
>UniRef50_O66486 Cluster: 30S ribosomal protein S13; n=28; cellular
organisms|Rep: 30S ribosomal protein S13 - Aquifex
aeolicus
Length = 126
Score = 33.9 bits (74), Expect = 2.2
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 265 LNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
LN + +D Y +L +++ ++++LK + +RG+RH GL VRGQ
Sbjct: 53 LNTLRKFIDENYK--VEGDLRREVQLNIKKLKDMGCYRGIRHARGLPVRGQ 101
>UniRef50_Q98JF7 Cluster: Mll1963 protein; n=1; Mesorhizobium
loti|Rep: Mll1963 protein - Rhizobium loti
(Mesorhizobium loti)
Length = 315
Score = 33.5 bits (73), Expect = 2.9
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -3
Query: 193 AFASTLVKINVGFFENNVG-VPPANTFDSRHRK-HNLAFAIDVRIHDTKNML 44
AFA T V+ VGF++ VG + +D +K H+ AF DV + DTK L
Sbjct: 23 AFAETPVEPTVGFYKYTVGDIEVTAIYDGIWKKPHDPAFIKDVSVEDTKAAL 74
>UniRef50_A5FGA8 Cluster: DNA-(Apurinic or apyrimidinic site) lyase;
n=1; Flavobacterium johnsoniae UW101|Rep: DNA-(Apurinic
or apyrimidinic site) lyase - Flavobacterium johnsoniae
UW101
Length = 216
Score = 33.5 bits (73), Expect = 2.9
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +2
Query: 32 PDKFQHILRIMNT--NIDGKRKVMFAMTAIKGVGRRYSNIVLKKAD 163
P K Q +L I +T N + M +TA+KG+GR+ +N++L++ +
Sbjct: 87 PTKAQWLLEIAHTIQNDNDIPLTMSGLTALKGIGRKSANVILRETE 132
>UniRef50_Q9TCB7 Cluster: Ribosomal protein S13; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein S13 - Nephroselmis
olivacea
Length = 125
Score = 33.5 bits (73), Expect = 2.9
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 301 SQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
S +T S L +++D+ RL I +RG R+ L VRGQ
Sbjct: 63 SYVTGSKLKRTIQQDMSRLISISCYRGFRYIQKLPVRGQ 101
>UniRef50_O21258 Cluster: Ribosomal protein S13; n=1; Reclinomonas
americana|Rep: Ribosomal protein S13 - Reclinomonas
americana
Length = 122
Score = 33.1 bits (72), Expect = 3.9
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 307 LTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
L S L +++RL I+++RG+RH +GL V GQ
Sbjct: 65 LIESELRKNQTYNIKRLLDIKSYRGLRHAYGLPVHGQ 101
>UniRef50_Q6CFI9 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=2;
Saccharomycetales|Rep: Yarrowia lipolytica chromosome B
of strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 156
Score = 33.1 bits (72), Expect = 3.9
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 316 SNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
S+L K+ D+ER +K ++ G RH G+ V+GQ
Sbjct: 70 SDLAKKINADIERKRKTGSYVGRRHVMGMPVKGQ 103
>UniRef50_Q8W9S0 Cluster: Ribosomal protein S13; n=1; Mesostigma
viride|Rep: Ribosomal protein S13 - Mesostigma viride
Length = 116
Score = 32.7 bits (71), Expect = 5.1
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 322 LDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
L +++ + ERL KI ++RG RH+ GL RGQ
Sbjct: 72 LINRIHLNKERLIKISSYRGFRHHRGLPARGQ 103
>UniRef50_A5K357 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 2179
Score = 32.3 bits (70), Expect = 6.8
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 137 SNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIQTGS*IGKRILLMVNT 301
S I + K + L++R E + E++KII R YK++ G + I L++ +
Sbjct: 922 SIICISKVLLKLEQRVDEDLQNEIKKIILFNEKKRLYKLKKGEILRHSICLLIQS 976
>UniRef50_Q5NQ42 Cluster: 30S ribosomal protein S13; n=107; cellular
organisms|Rep: 30S ribosomal protein S13 - Zymomonas
mobilis
Length = 122
Score = 32.3 bits (70), Expect = 6.8
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +1
Query: 277 KDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
++ +D Y+ +L ++ +++RL + +RG+RH GL VRGQ
Sbjct: 57 REAIDADYT--VEGDLRRQVAMNIKRLMDLACYRGLRHRKGLPVRGQ 101
>UniRef50_P42732 Cluster: 30S ribosomal protein S13, chloroplast
precursor; n=6; cellular organisms|Rep: 30S ribosomal
protein S13, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 32.3 bits (70), Expect = 6.8
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 346 LERLKKIRAHRGMRHYWGLRVRGQ 417
++RLK+I+ +RG+RH GL RGQ
Sbjct: 122 IKRLKEIQCYRGVRHIQGLPCRGQ 145
>UniRef50_Q7RQE1 Cluster: Protein factor associated with
neutral-sphingomyelinase activation; n=3; Plasmodium
(Vinckeia)|Rep: Protein factor associated with
neutral-sphingomyelinase activation - Plasmodium yoelii
yoelii
Length = 1490
Score = 31.9 bits (69), Expect = 8.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 166 NVGFFENNVGVPPANTFDSRHRKHNL 89
N+ F NN PP NTF+ ++K+N+
Sbjct: 1189 NLSQFSNNCATPPINTFEKENQKYNV 1214
>UniRef50_P15758 Cluster: Mitochondrial ribosomal protein S13; n=4;
Magnoliophyta|Rep: Mitochondrial ribosomal protein S13 -
Oenothera bertiana (Bertero's evening primrose)
Length = 114
Score = 31.9 bits (69), Expect = 8.9
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 337 REDLERLKKIRAHRGMRHYWGLRVRGQ 417
R D+ER I +RG+RH GL +RGQ
Sbjct: 73 RADIERFISISCYRGIRHQDGLPLRGQ 99
>UniRef50_Q2JL76 Cluster: 30S ribosomal protein S13; n=212; cellular
organisms|Rep: 30S ribosomal protein S13 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 127
Score = 31.9 bits (69), Expect = 8.9
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +1
Query: 253 TDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
TD + + +V+G+Y +L + +++RL I +RG RH GL VRGQ
Sbjct: 49 TDAEVAALRTVVEGEYQ--VEGDLRRQEAMNIKRLIDIGTYRGRRHRLGLPVRGQ 101
>UniRef50_Q8FS35 Cluster: 30S ribosomal protein S13; n=42;
Bacteria|Rep: 30S ribosomal protein S13 -
Corynebacterium efficiens
Length = 122
Score = 31.9 bits (69), Expect = 8.9
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +1
Query: 253 TDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 417
TD + +D+++ + +L +++ D+ R +I +++G+RH GL VRGQ
Sbjct: 49 TDEQIASLRDVIEATWK--VEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVRGQ 101
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 472,489,994
Number of Sequences: 1657284
Number of extensions: 9333714
Number of successful extensions: 27272
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 26621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27265
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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