Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30282X
         (314 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1HQ01 Cluster: Ferritin isoform 2; n=1; Bombyx mori|Re...   128   2e-29
UniRef50_Q9N2P3 Cluster: Ferritin precursor; n=7; Obtectomera|Re...    38   0.043
UniRef50_A7S931 Cluster: Predicted protein; n=2; Nematostella ve...    33   0.93 
UniRef50_A6GIX1 Cluster: Putative uncharacterized protein; n=1; ...    32   2.9  
UniRef50_Q4TGM3 Cluster: Chromosome undetermined SCAF3605, whole...    31   5.0  
UniRef50_A0LTH5 Cluster: Rieske (2Fe-2S) domain protein; n=1; Ac...    31   6.6  
UniRef50_P28799 Cluster: Granulins precursor (Proepithelin) (PEP...    30   8.7  

>UniRef50_Q1HQ01 Cluster: Ferritin isoform 2; n=1; Bombyx mori|Rep:
           Ferritin isoform 2 - Bombyx mori (Silk moth)
          Length = 139

 Score =  128 bits (309), Expect = 2e-29
 Identities = 59/61 (96%), Positives = 59/61 (96%)
 Frame = +3

Query: 72  MKVYALIVACLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNHVVANGLKGLA 251
           MKVYALIVACLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNHVVAN LK LA
Sbjct: 1   MKVYALIVACLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNHVVANELKALA 60

Query: 252 S 254
           S
Sbjct: 61  S 61



 Score = 37.9 bits (84), Expect = 0.043
 Identities = 16/23 (69%), Positives = 19/23 (82%)
 Frame = +2

Query: 245 ISLMYLKRSYHYLLSGS*FNNLQ 313
           ++ +YLKRSYHYLLS S FNN Q
Sbjct: 59  LASLYLKRSYHYLLSASYFNNYQ 81


>UniRef50_Q9N2P3 Cluster: Ferritin precursor; n=7; Obtectomera|Rep:
           Ferritin precursor - Manduca sexta (Tobacco hawkmoth)
           (Tobacco hornworm)
          Length = 232

 Score = 37.9 bits (84), Expect = 0.043
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
 Frame = +3

Query: 72  MKVYALIVACL-ALGVLAEEDSCYQNVDQGCRR---TLSLPHCSAYYGQFKDNHVVANGL 239
           M      VACL AL      D+CYQ+V   C +   +L+LP+C+A Y ++  +  VA  +
Sbjct: 1   MNPITFFVACLLALCGAVAADTCYQDVSLDCSQVSNSLTLPNCNAVYAEYGHHGNVAKEM 60

Query: 240 KGLAS 254
           +  A+
Sbjct: 61  QAYAA 65



 Score = 30.7 bits (66), Expect = 6.6
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = +2

Query: 254 MYLKRSYHYLLSGS*FNNLQ 313
           ++L+RSY YLLS S FNN Q
Sbjct: 66  LHLERSYEYLLSSSYFNNYQ 85


>UniRef50_A7S931 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 311

 Score = 33.5 bits (73), Expect = 0.93
 Identities = 19/69 (27%), Positives = 28/69 (40%)
 Frame = +3

Query: 99  CLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNHVVANGLKGLASCI*NVPTI 278
           C  LG L    +C  N+   C    +L H   Y+G           L  + +C+ N+  I
Sbjct: 5   CTCLGNLTHNHTCLGNLTHICTCLGNLTHICTYFGNLTHICTCLGNLTHICTCLGNLTHI 64

Query: 279 ISCRAPNLT 305
            +C   NLT
Sbjct: 65  CTCLG-NLT 72



 Score = 31.9 bits (69), Expect = 2.9
 Identities = 19/70 (27%), Positives = 29/70 (41%)
 Frame = +3

Query: 96  ACLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNHVVANGLKGLASCI*NVPT 275
           +C  LG L    +C  N+   C    +L H   Y+G           L  + +C+ N+  
Sbjct: 114 SCTCLGNLTHICTCLGNLTHICTCLGNLTHICTYFGNLTHICTCLGNLTHICTCLGNLTH 173

Query: 276 IISCRAPNLT 305
           I +C   NLT
Sbjct: 174 ICTCLG-NLT 182


>UniRef50_A6GIX1 Cluster: Putative uncharacterized protein; n=1;
           Plesiocystis pacifica SIR-1|Rep: Putative
           uncharacterized protein - Plesiocystis pacifica SIR-1
          Length = 270

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +2

Query: 125 GRLMLSERRPRMQTDFKSAALQRVLRPIQGQPRCSER 235
           GR+++S R   M  D + AAL+R+L  +  Q RC E+
Sbjct: 111 GRVLVSIRFTEMPVDIEGAALERLLAFLDAQLRCFEQ 147


>UniRef50_Q4TGM3 Cluster: Chromosome undetermined SCAF3605, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF3605,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 122

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
 Frame = -3

Query: 231 SLQRGCP*IGRNTRCSAADLKSVC-ILGRRSDSMSLPRPAHP-----EPDRQR*EHTPSY 70
           +L RGC  +G + R     L S C   G  S S+SLP P HP      P  QR  H P++
Sbjct: 63  TLDRGCACVGASVR----QLPSACRATGVYSSSLSLPGPLHPLSPRGLPTGQR--HAPNF 116

Query: 69  LMRF 58
              F
Sbjct: 117 CFSF 120


>UniRef50_A0LTH5 Cluster: Rieske (2Fe-2S) domain protein; n=1;
           Acidothermus cellulolyticus 11B|Rep: Rieske (2Fe-2S)
           domain protein - Acidothermus cellulolyticus (strain
           ATCC 43068 / 11B)
          Length = 330

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 137 LSERRPRMQTDFKSAALQRVLRPIQGQPRCSERT*RI 247
           + E RP  + D +   ++RV+RP    PR ++R  RI
Sbjct: 6   IHENRPTPREDIRPRVIERVIRPQDADPRRAKRAERI 42


>UniRef50_P28799 Cluster: Granulins precursor (Proepithelin) (PEPI)
           [Contains: Acrogranin; Paragranulin; Granulin-1
           (Granulin G); Granulin-2 (Granulin F); Granulin-3
           (Granulin B); Granulin-4 (Granulin A); Granulin-5
           (Granulin C); Granulin-6 (Granulin D); Granulin-7
           (Granulin E)]; n=34; Eutheria|Rep: Granulins precursor
           (Proepithelin) (PEPI) [Contains: Acrogranin;
           Paragranulin; Granulin-1 (Granulin G); Granulin-2
           (Granulin F); Granulin-3 (Granulin B); Granulin-4
           (Granulin A); Granulin-5 (Granulin C); Granulin-6
           (Granulin D); Granulin-7 (Granulin E)] - Homo sapiens
           (Human)
          Length = 593

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +2

Query: 74  EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 199
           +GVC     H C +G  CA RG   L    PR     +  AL+++L
Sbjct: 548 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 593


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 305,440,864
Number of Sequences: 1657284
Number of extensions: 5430112
Number of successful extensions: 13120
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13119
length of database: 575,637,011
effective HSP length: 81
effective length of database: 441,397,007
effective search space used: 10152131161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)