BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30282X (314 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_02_0210 + 14324539-14324609,14324735-14325740,14325838-143273... 30 0.33 01_04_0143 + 16689471-16689498,16689687-16689818,16689974-166900... 28 1.3 07_01_0718 + 5484553-5484601,5484836-5484933,5485028-5485078,548... 27 3.1 05_04_0310 + 20114415-20117819 27 3.1 03_02_0235 + 6644083-6644125,6645218-6645315,6645448-6645498,664... 27 3.1 01_06_1580 - 38406740-38407257,38407481-38407552,38408309-384083... 27 3.1 08_01_0022 - 163512-163817,165963-166032,166074-166151,166399-16... 27 4.1 02_04_0157 + 20388761-20388763,20389807-20389935,20390206-203903... 27 4.1 07_03_0512 - 18954515-18955972 26 5.4 04_04_0981 + 29912275-29912814 26 5.4 12_02_0626 - 21344530-21344986,21346132-21346469,21347300-213473... 26 7.1 12_01_0522 - 4143921-4144556,4144656-4144798,4144903-4145551 26 7.1 12_01_0520 + 4120030-4120678,4120783-4120925,4121025-4121660 26 7.1 01_06_1808 - 40023533-40023966,40024078-40024204 26 7.1 12_02_0618 - 21262021-21262117,21262429-21262466,21262933-212629... 25 9.4 07_03_0524 - 19037638-19038294 25 9.4 06_01_1191 + 10240754-10240909,10241477-10241547,10241872-10242910 25 9.4 05_03_0096 + 8356109-8356231,8356291-8356605 25 9.4 04_04_1200 + 31690611-31690914,31690993-31691293,31691391-31696251 25 9.4 >08_02_0210 + 14324539-14324609,14324735-14325740,14325838-14327390, 14327473-14327601,14328345-14328510 Length = 974 Score = 30.3 bits (65), Expect = 0.33 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +2 Query: 44 IRH*INRIKYEGVCSHRCLSGSGCAGRGRLMLSERRPRM 160 IRH +N K+ C +SG C L++S R PRM Sbjct: 739 IRHRVNLAKHTCTCREWQVSGKPCPHALALIISTRNPRM 777 >01_04_0143 + 16689471-16689498,16689687-16689818,16689974-16690013, 16690214-16690280,16690349-16690431,16690755-16690821, 16692741-16692821,16693696-16693791,16694172-16694198 Length = 206 Score = 28.3 bits (60), Expect = 1.3 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +1 Query: 28 CYFFENSPLNKSHQI*RCMLS-SLPVWLWVC 117 CY E + L++ HQI C ++ S V +W C Sbjct: 71 CYHLEEADLHQCHQILTCTINGSSLVMIWCC 101 >07_01_0718 + 5484553-5484601,5484836-5484933,5485028-5485078, 5485744-5485857,5485887-5485937,5485938-5486138, 5486240-5486341,5486879-5486986,5487053-5487286, 5488250-5488500,5488592-5488763,5489165-5489320, 5489405-5489455,5489499-5489591,5489814-5490014, 5490105-5490236,5490308-5490481,5490755-5490994, 5491213-5491407 Length = 890 Score = 27.1 bits (57), Expect = 3.1 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = -1 Query: 227 YNVVVLELAVIRAAVRQT*SPSASLVDVLIA*VFLGQHTQSQTGNDE 87 YN V+LE A +RA+ T + +LVD L +F+ G+DE Sbjct: 500 YNRVILENATVRASAVSTLAKFGALVDSLKPRIFVLLRRCLFDGDDE 546 >05_04_0310 + 20114415-20117819 Length = 1134 Score = 27.1 bits (57), Expect = 3.1 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +2 Query: 56 INRIKYEGVCSHRCLSGSGCAGRGRLML 139 +N+++ E C RCL G G GRG L Sbjct: 48 LNQLRAEAGCVERCLGGGG-GGRGNCEL 74 >03_02_0235 + 6644083-6644125,6645218-6645315,6645448-6645498, 6645573-6645686,6645771-6645971,6646047-6646148, 6647245-6647352,6647745-6647995,6648108-6648279, 6648341-6648397,6648555-6648710,6648807-6648857, 6649053-6649193,6649270-6649464,6649534-6649665, 6649768-6649941,6650396-6650635,6650761-6650955 Length = 826 Score = 27.1 bits (57), Expect = 3.1 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = -1 Query: 227 YNVVVLELAVIRAAVRQT*SPSASLVDVLIA*VFL 123 YN V+LE A +RA+ T + +LVD L +F+ Sbjct: 422 YNRVILENATVRASAVSTLAKFGALVDALKPRIFV 456 >01_06_1580 - 38406740-38407257,38407481-38407552,38408309-38408365, 38408476-38408532,38408643-38408699,38408809-38408865, 38409371-38409424,38409744-38409800,38410023-38410076, 38412208-38412220,38413530-38413580,38414134-38414193, 38414640-38414761,38415033-38415894,38416468-38416667, 38417159-38417238,38417525-38417619 Length = 821 Score = 27.1 bits (57), Expect = 3.1 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = -3 Query: 204 GRNTRCSAADLKSVCILGRRSDSMSLPRPAHPEPDR 97 G NT D KSV ++ SD P P EP+R Sbjct: 662 GGNTSRRLNDRKSVIVIDSDSDEDEDPHPEQHEPER 697 >08_01_0022 - 163512-163817,165963-166032,166074-166151,166399-166439, 166830-166880,166997-167065,167924-168019,169217-169328, 169629-169774,169965-170015,170171-170281,170378-170447, 172496-172935 Length = 546 Score = 26.6 bits (56), Expect = 4.1 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = -3 Query: 141 DSMSLPRPAHPEPDRQR*EHTPSYLMRFI*WRILE 37 +S S PRP HPE D E P + R + RILE Sbjct: 10 ESSSPPRP-HPEADMVNKEKDPEEMKRKLKERILE 43 >02_04_0157 + 20388761-20388763,20389807-20389935,20390206-20390349, 20390690-20390835,20390915-20391071,20391312-20391370, 20391466-20391664,20392232-20392381,20392471-20392607, 20392717-20392863,20392975-20393076,20395655-20395712, 20395816-20395917,20396236-20396273,20396409-20396535, 20397092-20397259,20397356-20397487,20400222-20400331, 20400400-20400460,20400929-20401106,20401194-20401399, 20401552-20401671,20402523-20402621,20404177-20404386, 20404704-20404843,20404945-20405053,20405351-20405431, 20405523-20405693,20405825-20405974,20407029-20407202, 20407453-20407479,20407688-20407758,20407843-20407942, 20408305-20408361,20409457-20409513,20409656-20409736, 20410336-20410421,20410535-20410649 Length = 1466 Score = 26.6 bits (56), Expect = 4.1 Identities = 24/84 (28%), Positives = 37/84 (44%) Frame = +2 Query: 2 YFRHTSNALVIFSRIRH*INRIKYEGVCSHRCLSGSGCAGRGRLMLSERRPRMQTDFKSA 181 Y + T A++I S R + +Y G+ + + CA RGRL E R ++ Sbjct: 840 YRQQTKAAVIIQSYCRSYLAHSQYMGL--KKAAITTQCAWRGRLARRELRKLKMAAKETG 897 Query: 182 ALQRVLRPIQGQPRCSERT*RISL 253 ALQ ++ Q E T R+ L Sbjct: 898 ALQAAKNKLEKQ--VEELTWRLQL 919 >07_03_0512 - 18954515-18955972 Length = 485 Score = 26.2 bits (55), Expect = 5.4 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -3 Query: 237 VRSLQRGCP*IGRNTRCSAADLKSVC 160 VRSL +GR R AA++K+VC Sbjct: 429 VRSLMDDASEVGRKVREKAAEMKAVC 454 >04_04_0981 + 29912275-29912814 Length = 179 Score = 26.2 bits (55), Expect = 5.4 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 4/70 (5%) Frame = +2 Query: 17 SNALVIFSRIRH*INRIKYEGVCSHRCLSGSGCAGRGRLMLSERRPRMQ----TDFKSAA 184 S + + R+ I R + G+ S +G G GRG +++ + RP+ + F+ A Sbjct: 59 SGSAAVVGRVYSLIERERRMGLRSRSVAAGGGGGGRG-IVVRDERPKSRAFGWVSFRKAT 117 Query: 185 LQRVLRPIQG 214 RV+ G Sbjct: 118 SDRVVEVDDG 127 >12_02_0626 - 21344530-21344986,21346132-21346469,21347300-21347338, 21347572-21347629,21349854-21350136,21350404-21350766, 21350768-21350840 Length = 536 Score = 25.8 bits (54), Expect = 7.1 Identities = 12/47 (25%), Positives = 25/47 (53%) Frame = +2 Query: 92 RCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVLRPIQGQPRCSE 232 + ++G G +GRG ++ + PR + +A +R L +G +C + Sbjct: 87 KAVTGGGRSGRGLVVCCQMAPRRGGGERRSAQRRRLERRKGGDQCDD 133 >12_01_0522 - 4143921-4144556,4144656-4144798,4144903-4145551 Length = 475 Score = 25.8 bits (54), Expect = 7.1 Identities = 12/37 (32%), Positives = 17/37 (45%) Frame = -2 Query: 277 MVGTFQIHEANPLSPFATTWLSLNWP*YALQCGRLKV 167 +VG +Q+ P+ F W S WP A L+V Sbjct: 336 LVGAYQVF-VQPIFAFVERWASRRWPDSAFIAKELRV 371 >12_01_0520 + 4120030-4120678,4120783-4120925,4121025-4121660 Length = 475 Score = 25.8 bits (54), Expect = 7.1 Identities = 12/37 (32%), Positives = 17/37 (45%) Frame = -2 Query: 277 MVGTFQIHEANPLSPFATTWLSLNWP*YALQCGRLKV 167 +VG +Q+ P+ F W S WP A L+V Sbjct: 336 LVGAYQVF-VQPIFAFVERWASRRWPDSAFIAKELRV 371 >01_06_1808 - 40023533-40023966,40024078-40024204 Length = 186 Score = 25.8 bits (54), Expect = 7.1 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -3 Query: 144 SDSMSLPRPAHPEPDRQR*EHTPSYLMR 61 S S +LP PA P P Q+ P++ MR Sbjct: 140 STSSALPAPAPPPPPSQQQPPLPAFSMR 167 >12_02_0618 - 21262021-21262117,21262429-21262466,21262933-21262986, 21263274-21263438,21263523-21263759,21263857-21263918, 21264543-21264656,21264816-21264942,21266200-21266218, 21266338-21266428,21266932-21267094,21267182-21267330, 21268147-21268287,21268368-21268533,21268568-21268631, 21268729-21269084,21269759-21269977,21270328-21270433, 21270713-21270942 Length = 865 Score = 25.4 bits (53), Expect = 9.4 Identities = 10/26 (38%), Positives = 18/26 (69%) Frame = -2 Query: 115 TPRARQATMRAYTFIFDAIYLVANSR 38 TP ++QA +++Y +FDA+Y +R Sbjct: 473 TPLSKQA-LKSYAVVFDAVYTPKETR 497 >07_03_0524 - 19037638-19038294 Length = 218 Score = 25.4 bits (53), Expect = 9.4 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -3 Query: 153 GRRSDSMSLPRPAHPEPDRQR 91 GR + S P P HP PD +R Sbjct: 32 GRVAKRSSTPPPLHPSPDDER 52 >06_01_1191 + 10240754-10240909,10241477-10241547,10241872-10242910 Length = 421 Score = 25.4 bits (53), Expect = 9.4 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%) Frame = +3 Query: 69 NMKVYALIVACLALGVLAEEDSCYQNVDQGCRRTLSLPH--CSAYYGQFKDNHVVANGLK 242 N K LI++C+ L ++A DS RR ++ H CS+++ + KD V G+K Sbjct: 88 NRKERVLILSCIPL-IMALSDS------DNHRRLITDLHTGCSSHWHRIKDGVRVPRGIK 140 Query: 243 GL 248 L Sbjct: 141 NL 142 >05_03_0096 + 8356109-8356231,8356291-8356605 Length = 145 Score = 25.4 bits (53), Expect = 9.4 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = -3 Query: 189 CSAADLKSVCILGRRSDSMSLPRPAHPEPDRQR 91 C +A L S GR + LPRP H P R R Sbjct: 6 CPSAVLCSSACAGRLRAAACLPRPPHRCPVRPR 38 >04_04_1200 + 31690611-31690914,31690993-31691293,31691391-31696251 Length = 1821 Score = 25.4 bits (53), Expect = 9.4 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +2 Query: 77 GVCSHRCLSGSGCAGR 124 G+ +HRCLSG G GR Sbjct: 1384 GLLAHRCLSGHGEDGR 1399 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,323,578 Number of Sequences: 37544 Number of extensions: 160791 Number of successful extensions: 415 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 409 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 415 length of database: 14,793,348 effective HSP length: 72 effective length of database: 12,090,180 effective search space used: 386885760 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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