BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30282X (314 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AE014296-2674|AAS64988.1| 207|Drosophila melanogaster CG13067-P... 28 2.9 AY069336-1|AAL39481.1| 258|Drosophila melanogaster LD05259p pro... 27 5.0 AF070734-1|AAD09748.1| 218|Drosophila melanogaster Gasp precurs... 27 5.0 AE014297-401|AAF51920.1| 258|Drosophila melanogaster CG10287-PA... 27 5.0 AY113371-1|AAM29376.1| 1237|Drosophila melanogaster LP01827p pro... 26 8.8 AE014298-2399|AAF48606.2| 1342|Drosophila melanogaster CG4301-PA... 26 8.8 >AE014296-2674|AAS64988.1| 207|Drosophila melanogaster CG13067-PB, isoform B protein. Length = 207 Score = 27.9 bits (59), Expect = 2.9 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = +1 Query: 97 PVWLWVCWPRKTHAIR 144 P+W W+C P TH +R Sbjct: 115 PIWEWMCIPMATHHLR 130 >AY069336-1|AAL39481.1| 258|Drosophila melanogaster LD05259p protein. Length = 258 Score = 27.1 bits (57), Expect = 5.0 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 4/39 (10%) Frame = +3 Query: 117 LAEEDSCYQNVDQGCRRTL----SLPHCSAYYGQFKDNH 221 L E NVD G R L + PHCS YG F D + Sbjct: 66 LTENCDYLHNVDCGDRTELEPPITTPHCSRLYGIFPDEN 104 >AF070734-1|AAD09748.1| 218|Drosophila melanogaster Gasp precursor protein. Length = 218 Score = 27.1 bits (57), Expect = 5.0 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 4/39 (10%) Frame = +3 Query: 117 LAEEDSCYQNVDQGCRRTL----SLPHCSAYYGQFKDNH 221 L E NVD G R L + PHCS YG F D + Sbjct: 66 LTENCDYLHNVDCGDRTELEPPITTPHCSRLYGIFPDEN 104 >AE014297-401|AAF51920.1| 258|Drosophila melanogaster CG10287-PA protein. Length = 258 Score = 27.1 bits (57), Expect = 5.0 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 4/39 (10%) Frame = +3 Query: 117 LAEEDSCYQNVDQGCRRTL----SLPHCSAYYGQFKDNH 221 L E NVD G R L + PHCS YG F D + Sbjct: 66 LTENCDYLHNVDCGDRTELEPPITTPHCSRLYGIFPDEN 104 >AY113371-1|AAM29376.1| 1237|Drosophila melanogaster LP01827p protein. Length = 1237 Score = 26.2 bits (55), Expect = 8.8 Identities = 8/11 (72%), Positives = 11/11 (100%) Frame = +1 Query: 82 MLSSLPVWLWV 114 +L+SLPVWLW+ Sbjct: 1180 LLASLPVWLWI 1190 >AE014298-2399|AAF48606.2| 1342|Drosophila melanogaster CG4301-PA protein. Length = 1342 Score = 26.2 bits (55), Expect = 8.8 Identities = 8/11 (72%), Positives = 11/11 (100%) Frame = +1 Query: 82 MLSSLPVWLWV 114 +L+SLPVWLW+ Sbjct: 1285 LLASLPVWLWI 1295 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,865,543 Number of Sequences: 53049 Number of extensions: 263763 Number of successful extensions: 689 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 650 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 689 length of database: 24,988,368 effective HSP length: 74 effective length of database: 21,062,742 effective search space used: 631882260 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -