Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30281
         (709 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075204-1|AAL68072.1|  365|Drosophila melanogaster AT14090p pro...    91   1e-18
AE014297-619|AAF54013.2|  365|Drosophila melanogaster CG1287-PA ...    91   1e-18
BT009945-1|AAQ22414.1|  341|Drosophila melanogaster RH72958p pro...    86   5e-17
AE014298-1546|AAF47994.1|  341|Drosophila melanogaster CG2076-PA...    86   5e-17
BT023016-1|AAY55432.1|  176|Drosophila melanogaster IP04080p pro...    32   0.66 
AE014296-3148|AAF49161.1|  162|Drosophila melanogaster CG14095-P...    31   2.0  

>AY075204-1|AAL68072.1|  365|Drosophila melanogaster AT14090p
           protein.
          Length = 365

 Score = 91.5 bits (217), Expect = 1e-18
 Identities = 39/81 (48%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
 Frame = +2

Query: 479 FFGADCW*CSA----VFRTPALLNLVARNGWMSIIVTLGLMIGSGMVVRGMEYTPGFGAK 646
           +FGA C   +A     F++ A++ L+ R+GW++ +VTLGL++ SG + +G+EY PGFGAK
Sbjct: 150 YFGASCGVTAASAVAFFQSDAMMALMTRSGWVASLVTLGLVMLSGSIAQGLEYQPGFGAK 209

Query: 647 QLAWMAHTGIMGAVIAPICFL 709
           QLAW+ H  ++GAV+AP+C L
Sbjct: 210 QLAWLVHCAVLGAVLAPMCLL 230



 Score = 65.7 bits (153), Expect = 6e-11
 Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
 Frame = +3

Query: 273 PTLRERLMAPAGPNAFXXXXXXXXXXXXXXXXXXCYYGSGV--KPGTLQESHLWPQYVKE 446
           P+L+ER+M P   NA+                  CYYG G+  +P     S +WPQYV++
Sbjct: 83  PSLKERMMGPPSENAYSMGKGAAAGAALMGLVGLCYYGLGLANQPSIYDNSMVWPQYVRD 142

Query: 447 RIKTTYGYIAGSLVLTAGSAVLF 515
           RI  TY Y   S  +TA SAV F
Sbjct: 143 RIHATYAYFGASCGVTAASAVAF 165


>AE014297-619|AAF54013.2|  365|Drosophila melanogaster CG1287-PA
           protein.
          Length = 365

 Score = 91.5 bits (217), Expect = 1e-18
 Identities = 39/81 (48%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
 Frame = +2

Query: 479 FFGADCW*CSA----VFRTPALLNLVARNGWMSIIVTLGLMIGSGMVVRGMEYTPGFGAK 646
           +FGA C   +A     F++ A++ L+ R+GW++ +VTLGL++ SG + +G+EY PGFGAK
Sbjct: 150 YFGASCGVTAASAVAFFQSDAMMALMTRSGWVASLVTLGLVMLSGSIAQGLEYQPGFGAK 209

Query: 647 QLAWMAHTGIMGAVIAPICFL 709
           QLAW+ H  ++GAV+AP+C L
Sbjct: 210 QLAWLVHCAVLGAVLAPMCLL 230



 Score = 66.5 bits (155), Expect = 3e-11
 Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
 Frame = +3

Query: 240 RTSNKVATRSQ-PTLRERLMAPAGPNAFXXXXXXXXXXXXXXXXXXCYYGSGV--KPGTL 410
           R  +++ +R++ P+L+ER+M P   NA+                  CYYG G+  +P   
Sbjct: 71  RDRSQLESRTRGPSLKERMMGPPSENAYSMGKGAAAGAALMGLVGLCYYGLGLANQPSIY 130

Query: 411 QESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVLF 515
             S +WPQYV++RI  TY Y   S  +TA SAV F
Sbjct: 131 DHSMVWPQYVRDRIHATYAYFGASCGVTAASAVAF 165


>BT009945-1|AAQ22414.1|  341|Drosophila melanogaster RH72958p
           protein.
          Length = 341

 Score = 85.8 bits (203), Expect = 5e-17
 Identities = 42/81 (51%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
 Frame = +2

Query: 479 FFGADCW*----CSAVFRTPALLNLVARNGWMSIIVTLGLMIGSGMVVRGMEYTPGFGAK 646
           FFG  C       +A FR+  LL L +R G ++ I +L L+IGSG V R +EY PG GAK
Sbjct: 127 FFGGSCVLTAAAAAATFRSHRLLELASRGGILATIASLALVIGSGAVARSIEYQPGLGAK 186

Query: 647 QLAWMAHTGIMGAVIAPICFL 709
            LAW  H  I+GAVIAPICF+
Sbjct: 187 HLAWAVHCAILGAVIAPICFM 207



 Score = 64.1 bits (149), Expect = 2e-10
 Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
 Frame = +3

Query: 240 RTSNKVATRSQPTLRERLMAPAGPNAFXXXXXXXXXXXXXXXXXXCYYGSGVKPGT--LQ 413
           RT   V     P+L+E+LM P   NA+                  CYYG G+   T    
Sbjct: 49  RTREPVEEMRAPSLKEKLMGPPSANAYSMGKGAAAGAAAVGLGALCYYGVGLGKQTSIAD 108

Query: 414 ESHLWPQYVKERIKTTYGYIAGSLVLT-AGSAVLFSEH 524
            + +WPQ+V++RI++TY +  GS VLT A +A  F  H
Sbjct: 109 NAIMWPQFVRDRIQSTYAFFGGSCVLTAAAAAATFRSH 146


>AE014298-1546|AAF47994.1|  341|Drosophila melanogaster CG2076-PA
           protein.
          Length = 341

 Score = 85.8 bits (203), Expect = 5e-17
 Identities = 42/81 (51%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
 Frame = +2

Query: 479 FFGADCW*----CSAVFRTPALLNLVARNGWMSIIVTLGLMIGSGMVVRGMEYTPGFGAK 646
           FFG  C       +A FR+  LL L +R G ++ I +L L+IGSG V R +EY PG GAK
Sbjct: 127 FFGGSCVLTAAAAAATFRSHRLLELASRGGILATIASLALVIGSGAVARSIEYQPGLGAK 186

Query: 647 QLAWMAHTGIMGAVIAPICFL 709
            LAW  H  I+GAVIAPICF+
Sbjct: 187 HLAWAVHCAILGAVIAPICFM 207



 Score = 64.1 bits (149), Expect = 2e-10
 Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
 Frame = +3

Query: 240 RTSNKVATRSQPTLRERLMAPAGPNAFXXXXXXXXXXXXXXXXXXCYYGSGVKPGT--LQ 413
           RT   V     P+L+E+LM P   NA+                  CYYG G+   T    
Sbjct: 49  RTREPVEEMRAPSLKEKLMGPPSANAYSMGKGAAAGAAAVGLGALCYYGVGLGKQTSIAD 108

Query: 414 ESHLWPQYVKERIKTTYGYIAGSLVLT-AGSAVLFSEH 524
            + +WPQ+V++RI++TY +  GS VLT A +A  F  H
Sbjct: 109 NAIMWPQFVRDRIQSTYAFFGGSCVLTAAAAAATFRSH 146


>BT023016-1|AAY55432.1|  176|Drosophila melanogaster IP04080p
           protein.
          Length = 176

 Score = 32.3 bits (70), Expect = 0.66
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -2

Query: 702 QIGAMTAPIIPVCAIHANCLAPNPGVYSIPLTTMPEPII 586
           ++    A  + +CA+ A C+A  PG+   PL  +P P+I
Sbjct: 7   EVPKQVAKAVVICALIA-CVAAKPGLLHTPLAALPAPVI 44


>AE014296-3148|AAF49161.1|  162|Drosophila melanogaster CG14095-PA
           protein.
          Length = 162

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -2

Query: 675 IPVCAIHANCLAPNPGVYSIPLTTMPEPII 586
           + +CA+ A C+A  PG+   PL  +P P+I
Sbjct: 6   VVICALIA-CVAAKPGLLHTPLAALPAPVI 34


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,644,864
Number of Sequences: 53049
Number of extensions: 764345
Number of successful extensions: 2333
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2307
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)