Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30280X
(579 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 152 5e-36
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 152 7e-36
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 149 6e-35
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 147 1e-34
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 124 2e-27
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 123 4e-27
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 122 5e-27
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 121 1e-26
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 104 1e-21
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 98 2e-19
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 97 2e-19
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 94 2e-18
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 90 4e-17
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 85 2e-15
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 80 4e-14
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 66 7e-10
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 51 2e-05
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 50 4e-05
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 50 5e-05
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 47 4e-04
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 46 6e-04
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 45 0.001
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 45 0.001
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 43 0.006
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 40 0.032
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 40 0.056
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 39 0.074
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 39 0.098
UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus ... 38 0.13
UniRef50_UPI0000DD81A8 Cluster: PREDICTED: SET domain containing... 37 0.30
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 37 0.30
UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus ... 36 0.69
UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1; ... 35 1.2
UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5; Sulfolo... 34 2.1
UniRef50_UPI000155618C Cluster: PREDICTED: similar to poliovirus... 34 2.8
UniRef50_A0LWP6 Cluster: Transcriptional regulator, MarR family;... 34 2.8
UniRef50_Q9VPR6 Cluster: CG13688-PA; n=3; Sophophora|Rep: CG1368... 34 2.8
UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1; ... 33 3.7
UniRef50_O86476 Cluster: Clumping factor B precursor; n=31; Stap... 33 3.7
UniRef50_UPI0001597133 Cluster: YcbU; n=1; Bacillus amyloliquefa... 33 4.9
UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;... 33 4.9
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 33 4.9
UniRef50_Q0IR54 Cluster: Os11g0676800 protein; n=1; Oryza sativa... 33 6.4
UniRef50_Q754S3 Cluster: AFL002Cp; n=2; Saccharomycetaceae|Rep: ... 33 6.4
UniRef50_Q7VKW9 Cluster: Possible uroporphyrinogen III synthase;... 32 8.5
UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4; Actin... 32 8.5
UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1; ... 32 8.5
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 152 bits (369), Expect = 5e-36
Identities = 82/145 (56%), Positives = 99/145 (68%), Gaps = 11/145 (7%)
Frame = +1
Query: 139 MEGLCTSCRWRQRQARIP---DETGRPDKQPCSSSD------VKGPLIYRPRRDGERKRK 291
+ G C W+ RI D+ G P KQ ++ KG YRPRR GERKRK
Sbjct: 36 VSGECLGDEWKGYVFRITGGNDKQGFPMKQGIMTNGRVRLLLSKGHSCYRPRRTGERKRK 95
Query: 292 SVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRR 471
SVRGCIVD+ LSVL+LVIV+KG Q+IPGLTD +PRRLGPKR KIRK+FNLSKEDDVR+
Sbjct: 96 SVRGCIVDSQLSVLSLVIVKKGEQDIPGLTDNTIPRRLGPKRVGKIRKMFNLSKEDDVRQ 155
Query: 472 YVVKRVLPAKEGKRTLN--PDIRHL 540
YV++R LP KEGK+ + P I+ L
Sbjct: 156 YVIRRPLPEKEGKKAKSKAPKIQRL 180
Score = 142 bits (343), Expect = 7e-33
Identities = 63/93 (67%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Frame = +2
Query: 8 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 187
MKLN+SYP TGCQKL E+ DE K+R FY+KRM EV + LGDEWKGYV R+ GGNDKQG
Sbjct: 1 MKLNISYPVTGCQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQG 60
Query: 188 FPMKQGVLTNSRVRLLMSKGHS-FTDRAAMERE 283
FPMKQG++TN RVRLL+SKGHS + R ER+
Sbjct: 61 FPMKQGIMTNGRVRLLLSKGHSCYRPRRTGERK 93
Score = 40.7 bits (91), Expect = 0.024
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3
Query: 507 KENAKPRHKAPKIQRLVTPVVLQR 578
KE K + KAPKIQRLVTPVVLQR
Sbjct: 165 KEGKKAKSKAPKIQRLVTPVVLQR 188
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 152 bits (368), Expect = 7e-36
Identities = 69/93 (74%), Positives = 80/93 (86%), Gaps = 1/93 (1%)
Frame = +2
Query: 8 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 187
MKLNVS+PATG QK FEV+D+HKLR FY+KRMGAE+ AD LGDEWKGYV ++AGGNDKQG
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 188 FPMKQGVLTNSRVRLLMSKGHS-FTDRAAMERE 283
FPMKQGVLTN+RVRLL+ KGHS + R ER+
Sbjct: 61 FPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERK 93
Score = 147 bits (356), Expect = 2e-34
Identities = 73/102 (71%), Positives = 83/102 (81%), Gaps = 2/102 (1%)
Frame = +1
Query: 241 KGPLIYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 420
KG YRPRR GERKRKSVRGCIVD NLS LAL++V+KG ++IPGLTD V RRLGPKRA
Sbjct: 79 KGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKDIPGLTDTTVLRRLGPKRA 138
Query: 421 SKIRKLFNLSKEDDVRRYVVKRVLPAKEGK--RTLNPDIRHL 540
S IRKL+NL+KEDDVR+YVVKR LP K+GK RT P I+ L
Sbjct: 139 SNIRKLYNLTKEDDVRQYVVKRPLPEKDGKKPRTKAPKIQRL 180
Score = 43.2 bits (97), Expect = 0.005
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +3
Query: 507 KENAKPRHKAPKIQRLVTPVVLQR 578
K+ KPR KAPKIQRL+TPVVLQR
Sbjct: 165 KDGKKPRTKAPKIQRLITPVVLQR 188
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 149 bits (360), Expect = 6e-35
Identities = 70/82 (85%), Positives = 74/82 (90%)
Frame = +2
Query: 8 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 187
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 188 FPMKQGVLTNSRVRLLMSKGHS 253
FPMKQGVLT+ R+RLL K HS
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHS 81
Score = 46.8 bits (106), Expect = 4e-04
Identities = 28/69 (40%), Positives = 40/69 (57%)
Frame = +1
Query: 256 YRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRK 435
+ PR + RK K+VR V+AN+S L LV+++K P RLGP R+S I K
Sbjct: 83 FHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PCRLGPVRSSNISK 132
Query: 436 LFNLSKEDD 462
++ L +EDD
Sbjct: 133 IYYLCEEDD 141
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 147 bits (357), Expect = 1e-34
Identities = 77/102 (75%), Positives = 85/102 (83%), Gaps = 2/102 (1%)
Frame = +1
Query: 241 KGPLIYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 420
KG YRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD VPRRLGPKRA
Sbjct: 79 KGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRA 138
Query: 421 SKIRKLFNLSKEDDVRRYVVKRVLPAKEGK--RTLNPDIRHL 540
S+IRKLFNLSKEDDVR+YVV++ L KEGK RT P I+ L
Sbjct: 139 SRIRKLFNLSKEDDVRQYVVRKPL-NKEGKKPRTKAPKIQRL 179
Score = 147 bits (356), Expect = 2e-34
Identities = 68/93 (73%), Positives = 78/93 (83%), Gaps = 1/93 (1%)
Frame = +2
Query: 8 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 187
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 188 FPMKQGVLTNSRVRLLMSKGHS-FTDRAAMERE 283
FPMKQGVLT+ RVRLL+SKGHS + R ER+
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERK 93
Score = 39.9 bits (89), Expect = 0.042
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = +3
Query: 507 KENAKPRHKAPKIQRLVTPVVLQ 575
KE KPR KAPKIQRLVTP VLQ
Sbjct: 164 KEGKKPRTKAPKIQRLVTPRVLQ 186
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 124 bits (299), Expect = 2e-27
Identities = 56/87 (64%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Frame = +2
Query: 8 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 187
MK N+SYP TG QK E+ D+ K IF +K+MG EVE D LGDE+KGYV ++AGGNDK G
Sbjct: 1 MKFNISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDG 60
Query: 188 FPMKQGVLTNSRVRLLMSKGHS-FTDR 265
FPMKQGV+ RVRLL+S+GHS FT R
Sbjct: 61 FPMKQGVMVRGRVRLLLSEGHSCFTSR 87
Score = 101 bits (242), Expect = 1e-20
Identities = 54/104 (51%), Positives = 70/104 (67%), Gaps = 4/104 (3%)
Frame = +1
Query: 241 KGPLIYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 420
+G + RR G RKRKSVRGCIV ++ VLAL IV+KG EI GLT +PR+LGPKRA
Sbjct: 79 EGHSCFTSRRSGFRKRKSVRGCIVGPDMRVLALQIVKKGVAEIDGLTTVTLPRKLGPKRA 138
Query: 421 SKIRKLFNLSKEDD---VRRYVVKRVLPAKEGK-RTLNPDIRHL 540
+ I+KLF L KEDD +++ V++R +GK RT P I+ L
Sbjct: 139 NNIKKLFGLKKEDDPILIKKSVIRRTFKTAKGKDRTKCPKIQRL 182
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 123 bits (296), Expect = 4e-27
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +2
Query: 8 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 187
MKLN+S+PATGCQKL E DE K R FYEK M +EV AD LG+EWKGY++R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQG 60
Query: 188 FPMKQGVLTNSRVRLLM 238
FPMKQ VLT+ R+ LL+
Sbjct: 61 FPMKQDVLTHDRIHLLL 77
Score = 61.7 bits (143), Expect = 1e-08
Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 9/60 (15%)
Frame = +1
Query: 361 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD---------VRRYVVKRVLPAKEGKR 513
++IPGLTD PR +GPKRAS+IRKLFNLSKEDD +R+ + KR+ AKE ++
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDDAAQNSILRKIRKRIYKRMKEAKEKRQ 139
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 122 bits (295), Expect = 5e-27
Identities = 61/101 (60%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
Frame = +1
Query: 241 KGPLIYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 420
KG YRPR+ GE++RKSVRGCIV +LS L L +V+KG EIPGLTD V ++LGPKRA
Sbjct: 120 KGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKGTNEIPGLTDKAVGKKLGPKRA 179
Query: 421 SKIRKLFNLSKEDDVRRYVVKRVLPAKEGK-RTLNPDIRHL 540
+KIRKLFNL K DDVR+YV+ R + +K GK R + P I+ L
Sbjct: 180 TKIRKLFNLDKTDDVRKYVIGRAI-SKNGKNRFIKPKIQRL 219
Score = 104 bits (249), Expect = 2e-21
Identities = 49/80 (61%), Positives = 57/80 (71%)
Frame = +2
Query: 8 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 187
MKLN+S P QK E+ DE KL F EKR+G V D +G+E+ GYV R+ GGNDKQG
Sbjct: 42 MKLNISNPLNNVQKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGNDKQG 101
Query: 188 FPMKQGVLTNSRVRLLMSKG 247
FPM QGVLTN+RVRLL KG
Sbjct: 102 FPMMQGVLTNNRVRLLFKKG 121
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 121 bits (292), Expect = 1e-26
Identities = 53/81 (65%), Positives = 64/81 (79%)
Frame = +2
Query: 8 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 187
MK N+SYP TG QK E+ D+ K IF++KRMG VEAD LG+E+KGYVL++ GGNDKQG
Sbjct: 1 MKFNISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQG 60
Query: 188 FPMKQGVLTNSRVRLLMSKGH 250
FPM+QGVL RVR+LM KGH
Sbjct: 61 FPMRQGVLFKGRVRILMRKGH 81
Score = 111 bits (267), Expect = 1e-23
Identities = 57/104 (54%), Positives = 73/104 (70%), Gaps = 4/104 (3%)
Frame = +1
Query: 241 KGPLIYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 420
KG YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA EI GLTD NVPRRLGPKR
Sbjct: 79 KGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGLTDQNVPRRLGPKRL 138
Query: 421 SKIRKLFNLSKEDD---VRRYVVKRVLPAKEG-KRTLNPDIRHL 540
+K+R+LF K D V++ +++R K+G KR P I+ L
Sbjct: 139 TKLRRLFGFKKADGVAIVQKNLIRRTWTTKDGKKRQKAPKIQRL 182
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 104 bits (250), Expect = 1e-21
Identities = 49/75 (65%), Positives = 58/75 (77%)
Frame = +1
Query: 241 KGPLIYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 420
KG YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA EI GLTD NVPRRLGPKR
Sbjct: 84 KGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGLTDQNVPRRLGPKRL 143
Query: 421 SKIRKLFNLSKEDDV 465
+K+R+LF K D V
Sbjct: 144 TKLRRLFGFKKADRV 158
Score = 33.1 bits (72), Expect = 4.9
Identities = 18/31 (58%), Positives = 19/31 (61%)
Frame = +2
Query: 158 RVAGGNDKQGFPMKQGVLTNSRVRLLMSKGH 250
R GGNDKQG VL RVR+LM KGH
Sbjct: 62 RFTGGNDKQG------VLFKGRVRILMRKGH 86
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 97.9 bits (233), Expect = 2e-19
Identities = 44/76 (57%), Positives = 57/76 (75%)
Frame = +2
Query: 11 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGF 190
K+NV+YPATG K F+ +E R F +KR+G EV+A LGDE+KGY+L++ GG DK GF
Sbjct: 1 KINVAYPATGRIKKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGF 60
Query: 191 PMKQGVLTNSRVRLLM 238
PM GV TN+RVRLL+
Sbjct: 61 PMMTGVATNNRVRLLL 76
Score = 96.7 bits (230), Expect = 3e-19
Identities = 42/77 (54%), Positives = 62/77 (80%)
Frame = +1
Query: 256 YRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRK 435
Y+P R+GER+RK+VRG IV ++SVL ++V+KG EI G+T+ +P R GP+RAS RK
Sbjct: 83 YKPLRNGERRRKTVRGAIVAGDISVLNTIVVKKGEGEIEGVTNDALPMRAGPQRASHFRK 142
Query: 436 LFNLSKEDDVRRYVVKR 486
LFNLS++DDV+++V++R
Sbjct: 143 LFNLSQKDDVKKFVIRR 159
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 97.5 bits (232), Expect = 2e-19
Identities = 45/80 (56%), Positives = 64/80 (80%)
Frame = +1
Query: 274 GERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSK 453
GER+RK+VRGC++ ++++++ + I + G Q I G+TD PRRLGPKRASKIRKLFNLS+
Sbjct: 93 GERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSR 152
Query: 454 EDDVRRYVVKRVLPAKEGKR 513
+DVR+YVV+R + K GK+
Sbjct: 153 TEDVRKYVVRRRV-VKSGKK 171
Score = 84.2 bits (199), Expect = 2e-15
Identities = 40/81 (49%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +2
Query: 8 MKLNVSYPATGCQKLFEVVDEHKLRI-FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQ 184
MKLN++YP G K FE+ DE R+ + R+G EV+ G E+KGY+ R+ GG+DK
Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 185 GFPMKQGVLTNSRVRLLMSKG 247
GFPM GVL +SRV LL+ +G
Sbjct: 61 GFPMVPGVLASSRVSLLVKRG 81
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 93.9 bits (223), Expect = 2e-18
Identities = 49/100 (49%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Frame = +1
Query: 244 GPLIYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 423
G YRPR+DGERKRK+VRGCI+ +S L V+++KG +EI GLT VPRR GPKRAS
Sbjct: 80 GASCYRPRKDGERKRKTVRGCIISDEISALHCVVLQKGEKEIDGLTTTAVPRRFGPKRAS 139
Query: 424 KIRKLFNLS-KEDDVRRYVVKRVLPAKEGKRTLNPDIRHL 540
+R +F ++ + D + V+KR K GK T +P ++ L
Sbjct: 140 TLRAMFGITDSKFDASKLVLKR--EVKPGKFT-SPKVQRL 176
Score = 93.5 bits (222), Expect = 3e-18
Identities = 39/82 (47%), Positives = 58/82 (70%)
Frame = +2
Query: 8 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 187
M++ ++YP G Q + ++ D L YEKR+G ++E ++LG ++KGY+ R+ GG DKQG
Sbjct: 1 MRITLAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQG 60
Query: 188 FPMKQGVLTNSRVRLLMSKGHS 253
FPMKQGV+T R+RLL+ G S
Sbjct: 61 FPMKQGVITPRRIRLLLKTGAS 82
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 89.8 bits (213), Expect = 4e-17
Identities = 37/80 (46%), Positives = 56/80 (70%)
Frame = +2
Query: 8 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 187
MK N++ P+TG Q E+ DE KLRI Y K++ ++++ +G EW + + GG DKQG
Sbjct: 1 MKFNIANPSTGVQHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQG 60
Query: 188 FPMKQGVLTNSRVRLLMSKG 247
FPMK+G+L+ SRV++L+ KG
Sbjct: 61 FPMKEGILSPSRVKILLKKG 80
Score = 58.0 bits (134), Expect = 1e-07
Identities = 29/72 (40%), Positives = 47/72 (65%)
Frame = +1
Query: 268 RDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNL 447
+ GER RKSVRGCIV +SVL + ++ ++ +T+ N + L KR+S +RK+ L
Sbjct: 90 KKGERCRKSVRGCIVSPEISVLNIKLLTNKNDDLL-ITNKNSEKTLTHKRSSNLRKVLCL 148
Query: 448 SKEDDVRRYVVK 483
+K DD+R++ +K
Sbjct: 149 TKTDDIRKHYIK 160
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 84.6 bits (200), Expect = 2e-15
Identities = 41/69 (59%), Positives = 52/69 (75%)
Frame = +1
Query: 241 KGPLIYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 420
+G Y RR+GERKRKS+RGCIV +L L++V+V G + +PGLTD VP+RL PKRA
Sbjct: 85 QGAKCYLHRRNGERKRKSIRGCIVGPDLHALSVVLVDAGDKTLPGLTDVVVPKRLVPKRA 144
Query: 421 SKIRKLFNL 447
SKIR+LF L
Sbjct: 145 SKIRRLFGL 153
Score = 76.6 bits (180), Expect = 4e-13
Identities = 35/79 (44%), Positives = 48/79 (60%)
Frame = +2
Query: 11 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGF 190
K+N+S P TG K + D K + + RM +E + LG+E+ G R+ GGND QGF
Sbjct: 8 KVNISNPVTGANKSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGF 67
Query: 191 PMKQGVLTNSRVRLLMSKG 247
PM QGVL + R RLL+ +G
Sbjct: 68 PMYQGVLKSQRARLLLRQG 86
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 79.8 bits (188), Expect = 4e-14
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +2
Query: 8 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWK 145
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 65.7 bits (153), Expect = 7e-10
Identities = 38/99 (38%), Positives = 55/99 (55%)
Frame = +1
Query: 241 KGPLIYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 420
KG YR RR G R+RKSVRG IV + VL L+I+R G +EI GLT+ P++
Sbjct: 64 KGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEIDGLTNAVNDVSHLPRKE 123
Query: 421 SKIRKLFNLSKEDDVRRYVVKRVLPAKEGKRTLNPDIRH 537
K+RK+F + E+ ++ +L ++ P IRH
Sbjct: 124 KKLRKMFGVPDEEKNVVGYIRNILKSECDDPKKIPKIRH 162
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/66 (42%), Positives = 47/66 (71%)
Frame = +2
Query: 50 LFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVR 229
+FE+ +++R+ Y+K++G + + LG+E++G ++ + GG+D QGFPM G LT RVR
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVR 59
Query: 230 LLMSKG 247
L+SKG
Sbjct: 60 PLLSKG 65
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 51.2 bits (117), Expect = 2e-05
Identities = 30/96 (31%), Positives = 54/96 (56%)
Frame = +2
Query: 8 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 187
MK+N++ P G Q + DE I K +G +E LG+++ + GG+DKQG
Sbjct: 1 MKINIADPILGTQYSIKRDDEFIEHIIGRK-IGDTIEGSILGEDFSRNEFLINGGHDKQG 59
Query: 188 FPMKQGVLTNSRVRLLMSKGHSFTDRAAMERENVNQ 295
F +K+ + T R+++ + KG S +R+ +R+N+ +
Sbjct: 60 FLLKKNLNTFERLKINVKKG-SLGNRSHFKRKNLTK 94
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 50.0 bits (114), Expect = 4e-05
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Frame = +2
Query: 2 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQL--------GDEWKGYV- 154
A KL +S P +G K E+ ++ KR+G ++ A +L G E+ V
Sbjct: 2 ATFKLVISDPKSGIAKQVEITGAETEKLI-GKRIGDQIPAKELNINLNELFGKEFPEDVK 60
Query: 155 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSFTDRAAMER 280
L + GG DK GFPM+ + RVR+L+SKG F + ER
Sbjct: 61 LEIRGGTDKDGFPMRPDIHGPRRVRVLLSKGPGFRPKEKGER 102
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 49.6 bits (113), Expect = 5e-05
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Frame = +2
Query: 2 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLG---DEWKGYV------ 154
A KL +S P G K E+ ++ +R+G E+ A +LG E G
Sbjct: 2 ATFKLVISNPKNGVAKQVEISGPEADKLI-GRRIGEEIPASELGLNLSEIFGEEIPADAK 60
Query: 155 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSFTDRAAMER 280
L++ GG DK GFPM+ V RV++L+S+G F R ER
Sbjct: 61 LKITGGTDKDGFPMRPDVHGPRRVKILLSRGPGFRPRERGER 102
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 46.8 bits (106), Expect = 4e-04
Identities = 28/69 (40%), Positives = 40/69 (57%)
Frame = +1
Query: 256 YRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRK 435
+ PR + RK K+VR V+AN+S L LV+++K P RLGP R+S I K
Sbjct: 30 FHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PCRLGPVRSSNISK 79
Query: 436 LFNLSKEDD 462
++ L +EDD
Sbjct: 80 IYYLCEEDD 88
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 46.0 bits (104), Expect = 6e-04
Identities = 38/106 (35%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = +2
Query: 11 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGF 190
KLN+S+ Q L EV + KLR FYEK M E+ + +E N + F
Sbjct: 2 KLNISFLLIVYQILTEVDGKCKLRAFYEKCMTTEITVNFSCEE-----------NADKIF 50
Query: 191 PMKQGVLTNSRVRLLMSKGHSFTDRAAMERE-NVNQFVDVLLTPIS 325
MKQ VL + RV LL++ HS+ + RE N D + PIS
Sbjct: 51 SMKQEVLIHFRVHLLLNNLHSYIYKPLRTREMNYTSLQDAVKLPIS 96
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 45.2 bits (102), Expect = 0.001
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +2
Query: 47 KLFEV-VDEHKLRIFYEKRMGAEVEADQLGDEW-KGYVLRVAGGNDKQGFPMKQGVLTNS 220
K F++ ++ R F KR+G V A LG E KG L + GG+D+ GFPM+ +
Sbjct: 133 KAFQITIEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDIPGPV 192
Query: 221 RVRLLMSKGHSFTDRAAMER 280
+ R L+S F R ER
Sbjct: 193 KKRALLSGPPGFWPREKGER 212
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 98 RMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSF--TDRAA 271
++G E LG KGY LR+ GG+DK GFPMK+ V R + L++ G F T +
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVNGGTGFKPTKKGL 87
Query: 272 MERENV 289
R+ V
Sbjct: 88 RRRKTV 93
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 42.7 bits (96), Expect = 0.006
Identities = 28/96 (29%), Positives = 47/96 (48%)
Frame = +2
Query: 2 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDK 181
A ++ V+ P +G FEV D F + +GA V+ +G + GY + + GG+D
Sbjct: 2 ATFQVAVADPESGRTYQFEV-DGQDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSDD 58
Query: 182 QGFPMKQGVLTNSRVRLLMSKGHSFTDRAAMERENV 289
G PM++ V + + +L+ G F ER+ V
Sbjct: 59 AGRPMREDVDGSDLMEVLLEGGAGFNPDEDGERKRV 94
Score = 36.3 bits (80), Expect = 0.52
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 193 DETGRPDKQPCSSSDVKGPLI-----YRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 357
D+ GRP ++ SD+ L+ + P DGERKR +VRG V ++ L + I G
Sbjct: 57 DDAGRPMREDVDGSDLMEVLLEGGAGFNPDEDGERKRVTVRGKEVSEAVAQLNVAIDEHG 116
Query: 358 AQEIPGL 378
+ + L
Sbjct: 117 EEPVAEL 123
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 40.3 bits (90), Expect = 0.032
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Frame = +2
Query: 20 VSYPATG--CQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFP 193
+S P TG QK+ E + ++L K++G +V + + D Y L++ GG D+ GFP
Sbjct: 7 ISDPKTGRAYQKVVEGANANRL---IGKQIG-DVISGTIVDLPPDYELKITGGTDRDGFP 62
Query: 194 MKQGVLTNSRVRLLMSKGHSF 256
M+ + +R RLL+S G F
Sbjct: 63 MRPDLPGTARRRLLLSGGVGF 83
Score = 33.9 bits (74), Expect = 2.8
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 238 VKGPLIYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 357
+ G + +RP+ G RKRK VRG ++ ++ + V+V+ G
Sbjct: 77 LSGGVGFRPKEKGLRKRKGVRGRVISKDILQINTVVVKHG 116
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 39.5 bits (88), Expect = 0.056
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +2
Query: 2 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDK 181
+V+K+ VS P +G E + L Y K++G ++ ++G + GY L++ GG+D
Sbjct: 5 SVVKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIGLD--GYELKITGGSDI 59
Query: 182 QGFPMKQGV 208
GFPM++ V
Sbjct: 60 AGFPMRKEV 68
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 39.1 bits (87), Expect = 0.074
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +2
Query: 101 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSFTD 262
+G+E +A LG E K +R+ GG+DK G PM+ V +R +L+S+G D
Sbjct: 39 IGSEADATALGLEGK---IRITGGSDKSGVPMRPDVHGPARKYVLLSRGVGLRD 89
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 38.7 bits (86), Expect = 0.098
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = -3
Query: 247 AL*HQKTNTAVCQDALFHRESLLVVAASDTKYIALPFI 134
AL H++ +T V Q AL H E+LLVV D + ++LPF+
Sbjct: 174 ALGHEQEHTLVRQHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S6e -
Methanoregula boonei (strain 6A8)
Length = 143
Score = 38.3 bits (85), Expect = 0.13
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = +2
Query: 95 KRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSFTDRAAM 274
K++G EV+A LG GY + + GG+D+ G P ++ + R +LL+++G F M
Sbjct: 32 KKIGDEVDAGPLG--LAGYKILITGGSDQTGTPARKSLPGAGRRKLLLAEGVGF--HPVM 87
Query: 275 ERENVNQFV 301
E E + +
Sbjct: 88 EGERKRKMI 96
>UniRef50_UPI0000DD81A8 Cluster: PREDICTED: SET domain containing
1B; n=1; Homo sapiens|Rep: PREDICTED: SET domain
containing 1B - Homo sapiens
Length = 2145
Score = 37.1 bits (82), Expect = 0.30
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = -2
Query: 374 PGISWAPLRTITRAKTERLASTIHPRTDLRFLSPSRRGL*MSG-PLTSEDEHGCLSGRPV 198
PG + A RT T A T + TI PR+ LR+ P +SG P TS E G
Sbjct: 441 PGATRASSRTPTTAATNIIMYTILPRS-LRWPGPQP----LSGVPRTSRSEQSAALG--- 492
Query: 197 SSGILACRCRQRHEVHSPSIHRLTDQPLL 111
++ + R R + H P++H QPLL
Sbjct: 493 AAAVPRSRLNHRIQPHLPTLHHPPKQPLL 521
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 37.1 bits (82), Expect = 0.30
Identities = 16/54 (29%), Positives = 33/54 (61%)
Frame = +2
Query: 95 KRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSF 256
K++G E+ + E +GY L++ GG+D+ GF M+ + ++R+L+ +G +
Sbjct: 28 KKIGDEISGSIV--ELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLKEGPGY 79
>UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S6e
- Candidatus Nitrosopumilus maritimus SCM1
Length = 137
Score = 35.9 bits (79), Expect = 0.69
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +2
Query: 101 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSFTDRAAMER 280
+G E +A +G K L++ GG+DK G PM+ + +R +L+SKG D +R
Sbjct: 33 LGQETDASVVGLNGK---LKLTGGSDKSGVPMRNDIHGAARKYVLLSKGVGLQDAEKGQR 89
>UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1;
Xylella fastidiosa Temecula1|Rep: Putative
uncharacterized protein - Xylella fastidiosa (strain
Temecula1 / ATCC 700964)
Length = 109
Score = 35.1 bits (77), Expect = 1.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 145 GLCTSCRWRQRQARIPDETGRPDKQPCSSSDVKG 246
G C RWR ++ + DE G + PC+ DV+G
Sbjct: 17 GACCMARWRCQEINVTDEVGYGMRLPCTPHDVRG 50
>UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S6e -
Sulfolobus solfataricus
Length = 214
Score = 34.3 bits (75), Expect = 2.1
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +2
Query: 62 VDEHKLRIFYEKRMGAEVEADQL-GDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLM 238
VD++K ++G EA+QL G K L++ GG+D GFPM+ V+ ++ ++L+
Sbjct: 121 VDQNKATNLVGLKIGDVFEANQLIGLPVK---LKITGGSDNSGFPMRFDVIGAAKRKILL 177
Query: 239 SKGHSFTDRAAMER 280
S F ER
Sbjct: 178 SGPPGFYPNENGER 191
Score = 32.3 bits (70), Expect = 8.5
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 238 VKGPLIYRPRRDGERKRKSVRGCIVDANLSVLALVIVR 351
+ GP + P +GER+RK++RG + + + +IVR
Sbjct: 177 LSGPPGFYPNENGERRRKTIRGNTISQEIVQINTIIVR 214
>UniRef50_UPI000155618C Cluster: PREDICTED: similar to poliovirus
receptor-related 4, partial; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to poliovirus
receptor-related 4, partial - Ornithorhynchus anatinus
Length = 345
Score = 33.9 bits (74), Expect = 2.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 163 RWRQRQARIPDETGRPDKQPCSSSDVKGPLIYR 261
RWRQ + PD RP ++PC +DV P I+R
Sbjct: 20 RWRQGR---PDSLTRPTRRPCGPADVAAPEIHR 49
>UniRef50_A0LWP6 Cluster: Transcriptional regulator, MarR family;
n=1; Acidothermus cellulolyticus 11B|Rep:
Transcriptional regulator, MarR family - Acidothermus
cellulolyticus (strain ATCC 43068 / 11B)
Length = 155
Score = 33.9 bits (74), Expect = 2.8
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Frame = +1
Query: 208 PDKQPCSSSDVKGPLIYRPRRD-GERKRKSVRGCIV----DANLSVLALVIVRKGAQEIP 372
PD + + ++ L RP G R G +V D + V+ + + R+GAQ +
Sbjct: 50 PDSRGPTIGEISQALALRPHSTVGLVDRAEAAGLVVRHRTDRDARVVRVTLTRRGAQRLT 109
Query: 373 GLTDGNVP--RRLGPKRASKIRKLFNLSKE 456
GLT +V RRL P A ++L + +E
Sbjct: 110 GLTSQHVAEIRRLAPAFARLTKELAAMQEE 139
>UniRef50_Q9VPR6 Cluster: CG13688-PA; n=3; Sophophora|Rep:
CG13688-PA - Drosophila melanogaster (Fruit fly)
Length = 309
Score = 33.9 bits (74), Expect = 2.8
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 355 GAQEIPGLTDGNVPRRLGP-KRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKRTLNPD 528
G ++ L G+VPR GP K R+ L ED R Y V+ K GKRT +P+
Sbjct: 70 GDNDLLALLRGHVPRFYGPLKLVVNRRERTFLRLEDLTRSYAKPCVMDVKMGKRTWDPE 128
>UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1;
Bacteroides vulgatus ATCC 8482|Rep: Putative
uncharacterized protein - Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 541
Score = 33.5 bits (73), Expect = 3.7
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +1
Query: 337 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV 477
L+ V +EI LT GNVP+ + R ++RK NLS EDD+ Y+
Sbjct: 494 LLRVNLSTKEISMLT-GNVPKTINMNRY-RLRKSLNLSSEDDLTDYL 538
>UniRef50_O86476 Cluster: Clumping factor B precursor; n=31;
Staphylococcus aureus|Rep: Clumping factor B precursor -
Staphylococcus aureus
Length = 913
Score = 33.5 bits (73), Expect = 3.7
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 11 KLNVSYPAT-GCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 187
KL+ SY A L EV D+ K RI+YE A ++ GD K YV+ V G D G
Sbjct: 441 KLSDSYYADPNDSNLKEVTDQFKNRIYYEHPNVASIK---FGDITKTYVVLVEGHYDNTG 497
Query: 188 FPMKQGVL 211
+K V+
Sbjct: 498 KNLKTQVI 505
>UniRef50_UPI0001597133 Cluster: YcbU; n=1; Bacillus
amyloliquefaciens FZB42|Rep: YcbU - Bacillus
amyloliquefaciens FZB42
Length = 375
Score = 33.1 bits (72), Expect = 4.9
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = -2
Query: 359 APLRTITRAKTERLASTIHPRTDLRFLSPSRRGL*MSGPLTSEDEHGCLSGRPVSSGILA 180
A L + A T+R+ + + + S +GL ++GP +++D G +S R + A
Sbjct: 273 AALSLVNDAGTDRIHREVKKLSTFAYEYASEKGLHLTGPPSADDRPGMISIRDEKAAETA 332
Query: 179 CRCRQRHEVHSPS 141
R+++ V +PS
Sbjct: 333 ALLRRKNIVCAPS 345
>UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;
n=24; Bacteria|Rep: Phytoene dehydrogenase-related
protein - Rhodopseudomonas palustris
Length = 590
Score = 33.1 bits (72), Expect = 4.9
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -2
Query: 212 SGRPVSSGILACRCRQ-RHEVHSPSIHRLTDQPL 114
SGRPV+SGILA C Q +++ +P HR + P+
Sbjct: 22 SGRPVTSGILASLCEQWQNQPRTPLSHRSGNLPM 55
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 33.1 bits (72), Expect = 4.9
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 146 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSFTDRAAMER 280
GY L + GG+D GFPM + + R+L+S F R ER
Sbjct: 146 GYKLLIRGGSDNSGFPMLPSIPGPVKKRVLLSGPPGFHPREKGER 190
Score = 32.7 bits (71), Expect = 6.4
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 238 VKGPLIYRPRRDGERKRKSVRGCIVDANLSVLALVIV 348
+ GP + PR GER+RK+VRG + ++ + VIV
Sbjct: 176 LSGPPGFHPREKGERRRKTVRGNTITHDIVQINTVIV 212
>UniRef50_Q0IR54 Cluster: Os11g0676800 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0676800 protein -
Oryza sativa subsp. japonica (Rice)
Length = 822
Score = 32.7 bits (71), Expect = 6.4
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +1
Query: 286 RKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKE 456
+KS + C N ++ LV++RKG + LT G + K S RK+ N+SK+
Sbjct: 227 KKSSQSCSGRLNSYIVVLVMLRKGGWKSQQLTIGLARHEVAVKIRSLNRKIENISKD 283
>UniRef50_Q754S3 Cluster: AFL002Cp; n=2; Saccharomycetaceae|Rep:
AFL002Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 1151
Score = 32.7 bits (71), Expect = 6.4
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Frame = +1
Query: 172 QRQARIPDETGRPDKQPCSSSDVKGPLIYRPRRDGERKRKSVRGCIVDANLSVLALVIVR 351
+R +++ R DK+ + + VK + +PRR +KR + G + +
Sbjct: 656 ERVKAFQNKSKRADKKSTTGA-VKNTINTKPRRVRTKKRPASTG------------PVAK 702
Query: 352 KGAQEIPGLTDGN-VPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKRTLNPD 528
G + P T+ N +P++ K SK + FN+S ++ R ++ V+ +TL P+
Sbjct: 703 NGMKPEP--TEKNALPKKRSSKSTSKSAETFNVSTKEGNRVLIMAAVITKSIKGQTLWPE 760
Query: 529 IRHL 540
I HL
Sbjct: 761 IAHL 764
>UniRef50_Q7VKW9 Cluster: Possible uroporphyrinogen III synthase;
n=1; Haemophilus ducreyi|Rep: Possible uroporphyrinogen
III synthase - Haemophilus ducreyi
Length = 251
Score = 32.3 bits (70), Expect = 8.5
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 8 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQL 130
M + ++YPA+ QKL ++ +H++ Y+ E+ AD L
Sbjct: 1 MNVLITYPASRAQKLVDMCQQHRIFAIYQPIFSVELGADLL 41
>UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4;
Actinomycetales|Rep: ATP-dependent helicase HrpA -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 1282
Score = 32.3 bits (70), Expect = 8.5
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 59 VVDEHKLRIFYEKRMGAEVEADQLGDEW 142
VVDEH L FY+ R+GA+V + D+W
Sbjct: 774 VVDEHTLFDFYDARVGADVVSGAHFDQW 801
>UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1;
Burkholderia multivorans ATCC 17616|Rep: Putative
uncharacterized protein - Burkholderia multivorans ATCC
17616
Length = 165
Score = 32.3 bits (70), Expect = 8.5
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
Frame = +1
Query: 184 RIPDETGRPDKQP--------CSSSDVKGPLIYRPRRDGERKRKSVRGCIVDANLSVLAL 339
R+P+E G+ + +P C+ G R R R R+ GC +DA L
Sbjct: 49 RVPEEIGQHEFRPDVVGQHVQCAGHGAVGHAEQRRGRHRRRYRREHAGCGIDAERRERRL 108
Query: 340 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKL 438
+ A P RR+GP RA +++ L
Sbjct: 109 TDASRRAVRAPLRRPVGARRRVGPCRARRMKDL 141
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,495,047
Number of Sequences: 1657284
Number of extensions: 13056329
Number of successful extensions: 38811
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 37415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38786
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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