Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30279
         (646 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.17 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   1.6  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.2  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   6.6  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   8.7  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +2

Query: 440 IFYFQDIFGIFSVHI*PTFNHVFVKQQCSFITYYC--LFGDYSLLL 571
           I+YF   F IF++H+   F  V +   C +  YY   LF  + LLL
Sbjct: 212 IYYFYSAFIIFTIHL--LFYCVLIILLCIYYFYYAFILFTVHLLLL 255



 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 440 IFYFQDIFGIFSVHI 484
           I+YF   F IF+VH+
Sbjct: 146 IYYFYCAFIIFTVHL 160


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 638 FYFYKTSNSTVIALHFNL 585
           FYFYKT   TV+ + F +
Sbjct: 42  FYFYKTEQFTVLWVLFTM 59


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 233 NFYYFLHLTILLKYVITINYFV 298
           N YY L   I + YV+T+ Y V
Sbjct: 98  NLYYLLLFVINVLYVLTLCYAV 119


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 83  ICTYLQHTKIQILFLKISLDKQ 18
           +C     TKI ++ LKI +D++
Sbjct: 216 LCNEANKTKILLVGLKIDIDQE 237


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = -1

Query: 490 WLYMDRKNSKNI 455
           W ++DR+++KN+
Sbjct: 297 WYWLDRESAKNV 308


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = -1

Query: 490 WLYMDRKNSKNI 455
           W ++DR+++KN+
Sbjct: 297 WYWLDRESAKNV 308


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,875
Number of Sequences: 336
Number of extensions: 3605
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)