Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30279
         (646 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022972-13|AAC48241.2|  527|Caenorhabditis elegans Udp-glucuron...    29   2.1  
U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z99278-6|CAD59170.1|  276|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AF068713-18|AAC17791.2|   96|Caenorhabditis elegans Hypothetical...    28   6.5  
AF024503-1|AAG24089.2|  527|Caenorhabditis elegans Hypothetical ...    28   6.5  
U00048-5|AAB53832.2|  621|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U00048-4|AAM15547.1|  751|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>AF022972-13|AAC48241.2|  527|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein41 protein.
          Length = 527

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 473 KKFQKYLENKIFLPIRSL*H*YLFDSML 390
           K  Q+YLE  +FLP+ S+ H Y F  ++
Sbjct: 156 KAIQEYLEIPVFLPVTSITHDYRFAELI 183


>U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical
           protein W03A3.2 protein.
          Length = 1540

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 644 YYFYFYKTSNSTVIALHFNLYRSFIVTNYNH 552
           Y  YFYK S + +I   F +Y  FI+  + +
Sbjct: 418 YLVYFYKNSRAQIIQKIFKIYSIFILKKFKN 448


>Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical
           protein K07A12.4b protein.
          Length = 592

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 303 WYRVRCLVSLLGNEIAPSAPSGVQLRLYVQH*IK 404
           WY   CL+ L+ + +AP  PS   LR+ +   +K
Sbjct: 369 WYDGPCLLELIDSFVAPQPPSDGPLRIGISDVLK 402


>Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical
           protein K07A12.4a protein.
          Length = 610

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 303 WYRVRCLVSLLGNEIAPSAPSGVQLRLYVQH*IK 404
           WY   CL+ L+ + +AP  PS   LR+ +   +K
Sbjct: 387 WYDGPCLLELIDSFVAPQPPSDGPLRIGISDVLK 420


>Z99278-6|CAD59170.1|  276|Caenorhabditis elegans Hypothetical
           protein Y53C12B.5b protein.
          Length = 276

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 218 VSLSMNFYYFLHLTILLKYVITINYFV 298
           VS SM F YFL  ++   +VI  N+F+
Sbjct: 168 VSNSMIFSYFLEFSLFTNFVIFSNFFI 194


>AF068713-18|AAC17791.2|   96|Caenorhabditis elegans Hypothetical
           protein T24A6.1 protein.
          Length = 96

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +1

Query: 193 CYTRNVILCFFIYELLLFSSFNYT-FKIRYNNK 288
           C+ + + L  FI+   +F+  N++ F + +NNK
Sbjct: 55  CFAKRINLTKFIFSFFMFNKHNFSLFVLTFNNK 87


>AF024503-1|AAG24089.2|  527|Caenorhabditis elegans Hypothetical
           protein F31F4.7 protein.
          Length = 527

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -3

Query: 473 KKFQKYLENKIFLPIRSL*H*Y 408
           K  Q+YLE  +FLP+ SL H Y
Sbjct: 156 KAIQEYLEIPVFLPVTSLTHDY 177


>U00048-5|AAB53832.2|  621|Caenorhabditis elegans Hypothetical
           protein C05D11.7a protein.
          Length = 621

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 259 YTFKIRYNNKLFCGFGIESDVLFRSWGMRLRHQHH 363
           Y F  R  N++   FG+ +D   R +    +HQHH
Sbjct: 519 YEFHYRDENQVMKTFGLFTDSQQRPYSSASQHQHH 553


>U00048-4|AAM15547.1|  751|Caenorhabditis elegans Hypothetical
           protein C05D11.7b protein.
          Length = 751

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 259 YTFKIRYNNKLFCGFGIESDVLFRSWGMRLRHQHH 363
           Y F  R  N++   FG+ +D   R +    +HQHH
Sbjct: 537 YEFHYRDENQVMKTFGLFTDSQQRPYSSASQHQHH 571


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,931,878
Number of Sequences: 27780
Number of extensions: 296174
Number of successful extensions: 701
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)